Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.2e-129 466.5 225 100.0
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.9e-74 283.1 208 65.9
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 4.0e-45 185.7 154 55.2
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 2.6e-36 156.4 135 52.6
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 7.6e-36 154.8 124 54.8
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 1.7e-35 153.7 124 55.6
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 1.7e-35 153.7 127 53.5
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 6.5e-35 151.8 134 50.7
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 8.4e-35 151.4 119 58.0
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 1.1e-34 151.0 133 54.1
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 1.1e-34 151.0 132 53.0
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.4e-34 150.6 129 51.9
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.4e-34 150.6 129 51.9
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 1.4e-34 150.6 120 55.8
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 2.5e-34 149.8 120 56.7
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 2.5e-34 149.8 126 56.3
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 2.5e-34 149.8 129 54.3
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 2.5e-34 149.8 120 55.8
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 2.5e-34 149.8 127 52.8
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 3.2e-34 149.4 129 53.5
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 3.2e-34 149.4 120 55.8
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 3.2e-34 149.4 120 55.8
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 4.2e-34 149.1 120 55.0
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 4.2e-34 149.1 124 56.5
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 4.2e-34 149.1 120 55.8
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 5.5e-34 148.7 124 54.0
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 5.5e-34 148.7 124 54.0
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 5.5e-34 148.7 120 56.7
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 5.5e-34 148.7 133 52.6
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 5.5e-34 148.7 120 56.7
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 5.5e-34 148.7 120 55.0
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 7.2e-34 148.3 122 54.9
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 7.2e-34 148.3 125 56.0
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 9.3e-34 147.9 119 56.3
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 9.3e-34 147.9 119 56.3
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 9.3e-34 147.9 123 56.1
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 9.3e-34 147.9 153 48.4
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 1.2e-33 147.5 121 54.5
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 1.2e-33 147.5 120 54.2
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 1.2e-33 147.5 135 51.1
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 1.2e-33 147.5 123 53.7
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 1.2e-33 147.5 120 55.8
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 1.6e-33 147.1 121 57.0
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.1e-33 146.7 125 53.6
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.1e-33 146.7 125 53.6
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 2.1e-33 146.7 125 53.6
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 2.7e-33 146.4 121 53.7
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 2.7e-33 146.4 134 50.7
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 2.7e-33 146.4 123 53.7
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 2.7e-33 146.4 120 55.0
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 3.5e-33 146.0 120 54.2
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 3.5e-33 146.0 120 54.2
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 3.5e-33 146.0 120 55.8
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 4.6e-33 145.6 121 53.7
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 4.6e-33 145.6 121 53.7
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 4.6e-33 145.6 121 53.7
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 4.6e-33 145.6 121 53.7
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 4.6e-33 145.6 160 46.2
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 4.6e-33 145.6 128 51.6
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 4.6e-33 145.6 120 55.8
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 6.1e-33 145.2 139 48.9
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 6.1e-33 145.2 121 53.7
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 6.1e-33 145.2 122 53.3
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 6.1e-33 145.2 143 49.7
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 7.9e-33 144.8 120 55.0
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 7.9e-33 144.8 128 50.8
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 7.9e-33 144.8 121 52.9
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 7.9e-33 144.8 120 53.3
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 7.9e-33 144.8 120 53.3
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 7.9e-33 144.8 120 53.3
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 7.9e-33 144.8 119 54.6
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 7.9e-33 144.8 124 52.4
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 1.0e-32 144.4 120 53.3
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 1.3e-32 144.1 121 53.7
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 1.3e-32 144.1 120 53.3
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 2.3e-32 143.3 120 54.2
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 2.3e-32 143.3 127 52.0
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 2.3e-32 143.3 134 49.3
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 2.3e-32 143.3 121 52.1
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 3.0e-32 142.9 120 52.5
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 3.0e-32 142.9 121 52.9
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 3.0e-32 142.9 130 50.0
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 3.0e-32 142.9 119 53.8
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 3.9e-32 142.5 115 53.9
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 3.9e-32 142.5 121 52.9
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 3.9e-32 142.5 120 53.3
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 3.9e-32 142.5 120 53.3
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 3.9e-32 142.5 120 52.5
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 5.1e-32 142.1 121 52.9
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 5.1e-32 142.1 120 54.2
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 5.1e-32 142.1 134 48.5
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 6.7e-32 141.7 119 52.9
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 6.7e-32 141.7 120 52.5
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 8.7e-32 141.4 127 50.4
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 8.7e-32 141.4 130 50.8
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 8.7e-32 141.4 119 52.1
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 8.7e-32 141.4 119 52.1
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 1.1e-31 141.0 113 56.6
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 1.1e-31 141.0 120 52.5
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 7.4e-31 138.3 126 51.6
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 7.4e-31 138.3 133 48.1
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 7.4e-31 138.3 121 51.2
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 9.7e-31 137.9 120 50.8
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 1.6e-30 137.1 149 47.7
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 4.8e-30 135.6 137 48.9
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.1e-29 134.4 137 49.6
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 1.4e-29 134.0 112 53.6
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 2.4e-29 133.3 86 60.5
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 3.1e-29 132.9 115 51.3
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 4.1e-29 132.5 112 50.9
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 1.2e-28 131.0 100 57.0
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 7.7e-28 128.3 84 61.9
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 3.8e-27 125.9 86 59.3
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 1.9e-26 123.6 83 60.2
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 1.9e-26 123.6 83 60.2
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 9.4e-26 121.3 140 43.6
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 7.4e-23 111.7 104 47.1
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 9.7e-15 84.7 121 38.8
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.0e-11 74.7 72 47.2


User provided reference genes

Program Settings