Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_11580 Physcomitrium patens HOM05D011321 ORTHO05D002558 0.0e+00 1746.1 951 100.0
Pp3c7_250 Physcomitrium patens HOM05D011321 ORTHO05D002558 5.1e-198 695.7 775 51.1
Pp3c11_22850 Physcomitrium patens HOM05D011321 ORTHO05D002558 5.4e-192 675.6 621 56.0
Pp3c4_6340 Physcomitrium patens HOM05D011321 ORTHO05D002558 7.9e-175 618.6 618 53.2
Pp3c3_32390 Physcomitrium patens HOM05D011321 ORTHO05D002558 3.8e-169 599.7 615 51.2
Pp3c12_24850 Physcomitrium patens HOM05D011321 ORTHO05D002558 3.9e-166 589.7 619 51.2
Pp3c9_11390 Physcomitrium patens HOM05D011321 ORTHO05D002558 8.0e-151 538.9 397 66.5
Pp3c5_10560 Physcomitrium patens HOM05D011321 ORTHO05D002558 8.7e-81 306.2 624 33.5
Pp3c16_7080 Physcomitrium patens HOM05D011321 ORTHO05D002558 2.1e-79 301.6 626 33.9
Pp3c11_2920 Physcomitrium patens HOM05D011321 ORTHO05D002558 5.8e-77 293.5 629 32.3
Pp3c9_11400 Physcomitrium patens HOM05D011321 ORTHO05D002558 1.6e-74 285.4 328 54.3
Pp3c1_10720 Physcomitrium patens HOM05D011321 ORTHO05D002558 6.2e-71 273.5 635 30.4
Pp3c2_33610 Physcomitrium patens HOM05D011321 ORTHO05D002558 2.1e-63 248.4 627 29.7
AagrBONN_evm.TU.Sc2ySwM_362.2520 Anthoceros agrestis HOM05D011321 ORTHO05D002558 2.2e-39 168.7 335 31.3
AagrBONN_evm.TU.Sc2ySwM_362.2517 Anthoceros agrestis HOM05D011321 ORTHO05D002558 2.8e-39 168.3 289 35.6
AagrBONN_evm.TU.Sc2ySwM_344.2766 Anthoceros agrestis HOM05D011321 ORTHO05D002558 5.0e-28 131.0 274 33.9
Ciclev10028186m.g Citrus clementina HOM05D002655 ORTHO05D002558 2.0e-16 92.4 304 28.9
QL11p032810 Quercus lobata HOM05D002655 ORTHO05D002558 7.5e-16 90.5 306 28.1
Nn5g30443 Nelumbo nucifera HOM05D002655 ORTHO05D002558 9.8e-16 90.1 311 28.6
Duzib052G0908 Durio zibethinus HOM05D002655 ORTHO05D002558 1.3e-15 89.7 306 27.8
Sabra09G0072400 Salix brachista HOM05D002655 ORTHO05D002558 3.7e-15 88.2 307 27.0
Migut.B00397 Erythranthe guttata HOM05D002655 ORTHO05D002558 1.1e-14 86.7 309 28.2
Prupe.8G137000 Prunus persica HOM05D002655 ORTHO05D002558 1.4e-14 86.3 306 28.8
SEGI_02192 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 1.4e-14 86.3 309 26.5
Hma1.2p1_1023F.1_g249020 Hydrangea macrophylla HOM05D002655 ORTHO05D002558 1.8e-14 85.9 301 27.9
Sed0006288 Sechium edule HOM05D002655 ORTHO05D002558 2.4e-14 85.5 306 28.4
Gorai.005G234500 Gossypium raimondii HOM05D002655 ORTHO05D002558 3.1e-14 85.1 299 28.1
Thecc.02G110600 Theobroma cacao HOM05D002655 ORTHO05D002558 3.1e-14 85.1 312 26.9
Cfa004602 Carpinus fangiana HOM05D002655 ORTHO05D002558 4.1e-14 84.7 305 26.6
Manes.17G116700 Manihot esculenta HOM05D002655 ORTHO05D002558 4.1e-14 84.7 304 26.6
Gohir.D02G206848 Gossypium hirsutum HOM05D002655 ORTHO05D002558 5.4e-14 84.3 300 28.0
TAR376G0230 Trochodendron aralioides HOM05D002634 ORTHO05D003100 5.4e-14 84.3 308 28.6
Gohir.A03G185600 Gossypium hirsutum HOM05D002655 ORTHO05D002558 7.0e-14 84.0 299 28.1
CANSAT25G3644 Cannabis sativa HOM05D002655 ORTHO05D002558 9.1e-14 83.6 440 25.5
Haze_10198 Corylus avellana HOM05D002655 ORTHO05D002558 1.6e-13 82.8 307 26.7
TWI31G0106 Tripterygium wilfordii HOM05D002655 ORTHO05D002558 2.7e-13 82.0 298 27.9
Sed0024814 Sechium edule HOM05D002655 ORTHO05D002558 4.5e-13 81.3 284 26.4
COL.COLO4_32575 Corchorus olitorius HOM05D002655 ORTHO05D002558 1.7e-12 79.3 312 27.9
Aqoxy5G01133 Aquilegia oxysepala HOM05D002655 ORTHO05D002558 2.3e-12 79.0 315 26.0
CiPaw.05G013000 Carya illinoinensis HOM05D002655 ORTHO05D002558 2.3e-12 79.0 311 27.0
Eucgr.G01325 Eucalyptus grandis HOM05D002655 ORTHO05D002558 2.3e-12 79.0 319 26.3
Phvul.007G041300 Phaseolus vulgaris HOM05D002655 ORTHO05D002558 2.3e-12 79.0 311 27.0
Eucgr.L00953 Eucalyptus grandis HOM05D002655 ORTHO05D002558 2.9e-12 78.6 309 26.5
Lalb_Chr06g0165401 Lupinus albus HOM05D002655 ORTHO05D002558 2.9e-12 78.6 339 26.0
ClCG05G010340 Citrullus lanatus HOM05D002655 ORTHO05D002558 3.8e-12 78.2 305 26.6
Potri.009G094100 Populus trichocarpa HOM05D002655 ORTHO05D002558 5.0e-12 77.8 308 28.2
Sopen01g049700 Solanum pennellii HOM05D002655 ORTHO05D002558 5.0e-12 77.8 306 26.8
SalBow6G2528 Salvia bowleyana HOM05D002655 ORTHO05D002558 8.6e-12 77.0 256 29.3
CARHR105450 Cardamine hirsuta HOM05D002655 ORTHO05D002558 1.1e-11 76.6 317 24.9
CsaV3_3G018150 Cucumis sativus L. HOM05D002655 ORTHO05D002558 1.1e-11 76.6 308 26.3
Sp2g27250 Schrenkiella parvula HOM05D002655 ORTHO05D002558 1.5e-11 76.3 290 26.2
THA.LOC104819551 Tarenaya hassleriana HOM05D002655 ORTHO05D002558 1.5e-11 76.3 351 23.4
Carub.0003s2896 Capsella rubella HOM05D002655 ORTHO05D002558 1.9e-11 75.9 319 25.7
Nitab4.5_0014669g0010 Nicotiana tabacum HOM05D002655 ORTHO05D002558 1.9e-11 75.9 306 26.8
Oeu044272.1 Olea europaea HOM05D002655 ORTHO05D002558 1.9e-11 75.9 260 28.5
AT2G15020 Arabidopsis thaliana HOM05D002655 ORTHO05D002558 3.3e-11 75.1 319 24.1
A06p30910 Brassica napus HOM05D002655 ORTHO05D002558 3.3e-11 75.1 288 26.4
PGSC0003DMG400025860 Solanum tuberosum HOM05D002655 ORTHO05D002558 3.3e-11 75.1 306 26.5
MELO3C019552.2 Cucumis melo HOM05D002655 ORTHO05D002558 5.5e-11 74.3 312 26.9
BcaC01g02676 Brassica carinata HOM05D002655 ORTHO05D002558 7.2e-11 73.9 293 25.6
C03p62060 Brassica napus HOM05D002655 ORTHO05D002558 7.2e-11 73.9 293 25.6
FAN27G2566 Fragaria x ananassa HOM05D002655 ORTHO05D002558 7.2e-11 73.9 308 26.6
BcaB02g09778 Brassica carinata HOM05D002655 ORTHO05D002558 9.5e-11 73.6 290 26.2
HanXRQChr03g0068761 Helianthus annuus HOM05D002655 ORTHO05D002558 9.5e-11 73.6 336 25.6
Nitab4.5_0001480g0110 Nicotiana tabacum HOM05D002655 ORTHO05D002558 1.2e-10 73.2 306 26.8
SEGI_35148 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 1.2e-10 73.2 200 29.5
Aa31LG5G19190 Aethionema arabicum HOM05D002655 ORTHO05D002558 1.6e-10 72.8 287 25.1
BolC3t18467H Brassica oleracea HOM05D002655 ORTHO05D002558 1.6e-10 72.8 288 26.0
BraA06t26030Z Brassica rapa HOM05D002655 ORTHO05D002558 1.6e-10 72.8 288 26.0
MSTRG.20192 Avicennia marina HOM05D002655 ORTHO05D002558 2.1e-10 72.4 301 26.6
BcaB08g34579 Brassica carinata HOM05D002655 ORTHO05D002558 2.1e-10 72.4 356 25.3
Thhalv10005630m.g Eutrema salsugineum HOM05D002655 ORTHO05D002558 2.1e-10 72.4 290 25.9
FAN24G1942 Fragaria x ananassa HOM05D002655 ORTHO05D002558 2.1e-10 72.4 308 26.9
RcHm_v2.0_Chr6g0262281 Rosa chinensis HOM05D002655 ORTHO05D002558 2.1e-10 72.4 310 27.4
SEGI_33891 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 2.1e-10 72.4 203 28.1
CAN.G606.17 Capsicum annuum HOM05D002655 ORTHO05D002558 2.8e-10 72.0 308 25.3
Thhalv10022642m.g Eutrema salsugineum HOM05D002655 ORTHO05D002558 2.8e-10 72.0 316 26.6
A03p45370 Brassica napus HOM05D002655 ORTHO05D002558 3.6e-10 71.6 310 25.2
BraA03t13669Z Brassica rapa HOM05D002655 ORTHO05D002558 3.6e-10 71.6 310 25.2
Carub.0008s2498 Capsella rubella HOM05D002655 ORTHO05D002558 3.6e-10 71.6 306 25.8
BcaC01g03073 Brassica carinata HOM05D002655 ORTHO05D002558 4.7e-10 71.2 313 25.9
BolC3t17919H Brassica oleracea HOM05D002655 ORTHO05D002558 4.7e-10 71.2 313 25.9
C03p56290 Brassica napus HOM05D002655 ORTHO05D002558 8.0e-10 70.5 313 25.6
FvH4_2g07860 Fragaria vesca HOM05D002655 ORTHO05D002558 8.0e-10 70.5 306 26.8
Solyc01g107460.2 Solanum lycopersicum HOM05D002655 ORTHO05D002558 1.0e-09 70.1 262 26.7
PGR042G3535 Punica granatum HOM05D002655 ORTHO05D002558 1.8e-09 69.3 306 24.8
Cc02_g19370 Coffea canephora HOM05D002655 ORTHO05D002558 4.0e-09 68.2 311 26.4
Dinv42202 Davidia involucrata HOM05D002655 ORTHO05D002558 8.9e-09 67.0 302 26.8
MD00G1109200 Malus domestica HOM05D002655 ORTHO05D002558 8.9e-09 67.0 279 25.4
DCAR_001654 Daucus carota HOM05D002655 ORTHO05D002558 5.7e-08 64.3 257 26.1
CARHR278100 Cardamine hirsuta HOM05D002655 ORTHO05D002558 2.8e-07 62.0 218 26.1
Actinidia00403 Actinidia chinensis HOM05D002655 ORTHO05D002558 6.3e-07 60.8 72 41.7
SEGI_24844 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 1.4e-06 59.7 213 23.9
Rhsim11G0158300 Rhododendron simsii HOM05D002655 ORTHO05D002558 3.2e-06 58.5 302 24.5
Lsat_1_v5_gn_9_112601 Lactuca sativa HOM05D002655 ORTHO05D002558 7.0e-06 57.4 315 25.1


User provided reference genes

Program Settings