Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 8.8e-182 640.2 329 100.0
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 1.3e-124 450.3 294 79.6
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 6.9e-70 268.5 232 59.9
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 1.8e-65 253.8 226 55.3
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.4e-64 249.2 213 57.7
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 5.7e-64 248.8 213 57.3
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 1.3e-63 247.7 217 56.7
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 3.7e-63 246.1 244 51.6
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 3.7e-63 246.1 216 56.0
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 4.8e-63 245.7 211 57.3
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.8e-63 245.7 213 57.3
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 6.3e-63 245.4 266 50.8
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 1.4e-62 244.2 211 57.3
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 2.4e-62 243.4 211 56.4
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 2.4e-62 243.4 226 53.5
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 5.3e-62 242.3 211 56.4
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 5.3e-62 242.3 211 56.9
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 7.0e-62 241.9 210 56.2
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 9.1e-62 241.5 213 55.9
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 9.1e-62 241.5 215 56.3
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.2e-61 241.1 214 55.6
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 2.0e-61 240.4 245 51.8
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 2.0e-61 240.4 225 55.1
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 2.0e-61 240.4 220 54.5
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 2.0e-61 240.4 220 52.3
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 3.4e-61 239.6 212 56.1
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 4.5e-61 239.2 217 54.8
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 5.9e-61 238.8 234 51.7
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 7.7e-61 238.4 220 54.5
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 7.7e-61 238.4 231 54.1
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 1.3e-60 237.7 289 46.4
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 1.7e-60 237.3 214 54.7
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 1.7e-60 237.3 207 54.1
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 2.9e-60 236.5 286 47.6
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 3.8e-60 236.1 218 54.1
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 3.8e-60 236.1 206 56.3
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 5.0e-60 235.7 225 54.7
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 6.5e-60 235.3 262 45.4
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 8.5e-60 235.0 209 55.5
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 1.1e-59 234.6 206 56.8
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 1.9e-59 233.8 211 53.6
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 1.9e-59 233.8 244 49.2
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 2.5e-59 233.4 215 53.5
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 2.5e-59 233.4 237 49.4
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 4.2e-59 232.6 205 55.6
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 4.2e-59 232.6 211 53.6
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 5.5e-59 232.3 207 55.6
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 5.5e-59 232.3 230 50.0
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 5.5e-59 232.3 220 53.2
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 7.2e-59 231.9 206 56.3
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 9.4e-59 231.5 226 53.1
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 1.2e-58 231.1 237 49.8
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 1.2e-58 231.1 207 55.6
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.6e-58 230.7 201 57.7
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 1.6e-58 230.7 270 44.8
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 2.1e-58 230.3 205 54.1
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 4.7e-58 229.2 204 55.4
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 6.1e-58 228.8 243 49.8
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 6.1e-58 228.8 263 48.3
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.0e-57 228.0 239 49.8
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 1.4e-57 227.6 280 46.1
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 3.0e-57 226.5 231 51.1
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 3.0e-57 226.5 241 47.3
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 3.0e-57 226.5 269 47.2
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 3.9e-57 226.1 196 56.6
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 5.2e-57 225.7 234 50.4
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 5.2e-57 225.7 204 54.9
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 8.8e-57 224.9 211 53.1
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.1e-56 224.6 211 53.6
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 1.5e-56 224.2 284 45.4
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 1.5e-56 224.2 227 50.2
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 2.0e-56 223.8 210 52.4
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 2.6e-56 223.4 233 48.9
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 3.3e-56 223.0 233 50.2
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 5.7e-56 222.2 236 47.5
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 7.4e-56 221.9 284 45.8
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 7.4e-56 221.9 220 51.4
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 1.7e-55 220.7 235 50.2
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 3.7e-55 219.5 288 42.7
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 4.8e-55 219.2 264 46.6
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 6.3e-55 218.8 249 48.6
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 6.3e-55 218.8 207 53.6
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 6.3e-55 218.8 207 53.1
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 1.4e-54 217.6 252 47.2
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 1.4e-54 217.6 212 50.0
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 2.4e-54 216.9 208 52.4
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 3.1e-54 216.5 252 47.2
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 3.1e-54 216.5 237 47.3
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 4.1e-54 216.1 233 48.1
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 1.2e-53 214.5 294 42.5
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 1.6e-53 214.2 207 50.7
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 4.5e-53 212.6 170 58.2
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 5.9e-53 212.2 216 50.0
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 6.5e-52 208.8 211 50.2
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 1.1e-51 208.0 216 49.1
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 1.9e-51 207.2 216 49.1
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 1.9e-51 207.2 216 49.1
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 7.2e-51 205.3 223 48.4
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 7.2e-51 205.3 216 48.6
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 4.7e-50 202.6 214 49.1
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 6.1e-50 202.2 310 41.6
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 2.3e-49 200.3 216 48.1
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 3.7e-47 193.0 211 47.9
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.8e-46 190.7 196 50.5
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 3.1e-46 189.9 250 44.8
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 5.3e-46 189.1 225 45.8
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 3.8e-44 183.0 223 45.3
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 4.5e-37 159.5 186 48.4
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 8.0e-34 148.7 151 50.3
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 9.5e-27 125.2 116 55.2
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 3.9e-20 103.2 196 33.2
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 1.8e-17 94.4 258 29.5
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 3.2e-14 83.6 165 32.7
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 4.3e-11 73.2 72 43.1
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 4.3e-11 73.2 72 43.1


User provided reference genes

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