Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 1.4e-187 659.4 339 100.0
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 2.2e-151 539.3 340 82.6
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 4.4e-96 355.5 224 80.8
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 1.6e-90 337.0 240 73.8
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 3.6e-90 335.9 247 72.1
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 4.8e-90 335.5 255 67.5
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 6.2e-90 335.1 260 67.3
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 8.1e-90 334.7 231 71.9
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 1.1e-89 334.3 235 71.1
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 1.4e-89 334.0 223 74.0
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 1.4e-89 334.0 223 74.9
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 1.8e-89 333.6 278 61.5
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 2.4e-89 333.2 223 74.0
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 2.4e-89 333.2 223 74.0
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 3.1e-89 332.8 223 74.9
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 4.0e-89 332.4 263 65.4
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 4.0e-89 332.4 238 72.3
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 4.0e-89 332.4 289 62.3
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 4.0e-89 332.4 223 73.5
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 4.0e-89 332.4 223 73.5
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 9.0e-89 331.3 223 73.1
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 9.0e-89 331.3 223 73.5
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 1.2e-88 330.9 230 72.6
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 1.2e-88 330.9 237 71.3
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 2.0e-88 330.1 234 71.8
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 2.6e-88 329.7 223 73.1
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 2.6e-88 329.7 284 62.0
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 3.4e-88 329.3 227 72.7
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 3.4e-88 329.3 283 62.2
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 4.5e-88 328.9 261 66.7
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 4.5e-88 328.9 222 74.8
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 4.5e-88 328.9 225 72.9
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 5.8e-88 328.6 258 68.2
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 7.6e-88 328.2 231 71.4
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 9.9e-88 327.8 223 73.5
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 1.3e-87 327.4 223 73.5
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 1.3e-87 327.4 237 70.9
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 1.3e-87 327.4 255 67.1
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 1.3e-87 327.4 260 65.8
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 1.7e-87 327.0 223 71.3
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 2.2e-87 326.6 235 70.6
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 2.2e-87 326.6 220 74.1
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 2.2e-87 326.6 222 73.4
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 2.9e-87 326.2 222 73.0
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 2.9e-87 326.2 275 63.3
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 2.9e-87 326.2 224 72.3
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 4.9e-87 325.5 222 73.9
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 4.9e-87 325.5 262 64.9
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 8.4e-87 324.7 226 72.1
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 1.1e-86 324.3 225 74.2
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.4e-86 323.9 226 72.1
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 1.9e-86 323.6 244 66.4
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 1.9e-86 323.6 222 73.4
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 2.4e-86 323.2 233 70.0
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 2.4e-86 323.2 245 68.2
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 3.2e-86 322.8 226 71.7
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 5.4e-86 322.0 221 73.8
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 7.1e-86 321.6 221 75.6
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 2.7e-85 319.7 260 63.5
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 2.7e-85 319.7 315 55.6
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 3.5e-85 319.3 227 70.5
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 3.5e-85 319.3 251 66.9
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 3.5e-85 319.3 222 72.1
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 7.9e-85 318.2 249 67.1
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 1.0e-84 317.8 251 64.9
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 1.0e-84 317.8 226 70.8
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 1.3e-84 317.4 240 69.2
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 1.3e-84 317.4 223 73.1
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 1.8e-84 317.0 231 69.7
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 1.8e-84 317.0 242 66.9
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 2.3e-84 316.6 233 69.1
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 2.3e-84 316.6 226 70.4
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 3.9e-84 315.8 233 68.2
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 3.9e-84 315.8 231 69.7
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 5.1e-84 315.5 251 65.7
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 5.1e-84 315.5 251 66.1
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 8.7e-84 314.7 222 71.2
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 1.1e-83 314.3 233 68.2
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 1.5e-83 313.9 228 69.3
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 2.5e-83 313.2 231 69.3
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 2.5e-83 313.2 222 71.6
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 5.6e-83 312.0 224 69.2
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 7.4e-83 311.6 224 69.6
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 1.6e-82 310.5 222 69.8
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 6.2e-82 308.5 248 65.3
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 4.5e-80 302.4 207 72.5
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 5.8e-80 302.0 204 72.5
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 1.3e-79 300.8 211 72.0
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 1.1e-78 297.7 208 73.1
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 1.4e-78 297.4 212 69.8
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 5.5e-78 295.4 303 54.8
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 6.0e-77 292.0 248 64.1
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 5.1e-76 288.9 315 52.4
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 2.8e-74 283.1 226 63.3
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 5.3e-73 278.9 264 59.1
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 1.2e-72 277.7 223 65.5
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 5.8e-72 275.4 231 62.3
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 1.7e-71 273.9 193 72.0
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 2.7e-69 266.5 223 64.1
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 1.0e-68 264.6 230 61.7
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 1.8e-68 263.8 240 59.6
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 6.7e-68 261.9 189 70.4
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 3.3e-67 259.6 173 72.3
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 2.2e-66 256.9 189 69.3
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 2.4e-65 253.4 224 61.6
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 1.2e-64 251.1 253 55.3
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 5.9e-64 248.8 192 66.7
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 3.6e-61 239.6 230 57.0
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 5.0e-55 219.2 204 58.8
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 2.5e-54 216.9 213 55.9
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 1.5e-48 197.6 147 63.9
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 1.4e-46 191.0 139 68.3
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 2.2e-42 177.2 168 58.9
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 3.7e-42 176.4 162 59.9
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 1.1e-33 148.3 160 51.2
HanXRQChr03g0069601 Helianthus annuus HOM05D005661 ORTHO05D007997 2.5e-30 137.1 104 65.4
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 2.1e-29 134.0 112 60.7
AUR62030219 Chenopodium quinoa HOM05D005661 ORTHO05D007997 4.7e-29 132.9 168 48.2
SMO367G1054 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 7.7e-24 115.5 142 53.5
Ca_21047_v3 Cicer arietinum L. HOM05D005661 ORTHO05D147477 5.0e-23 112.8 267 35.2
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis HOM05D005661 ORTHO05D007997 2.1e-21 107.5 66 78.8
VMungo1364G0001 Vigna mungo HOM05D005661 ORTHO05D005421 1.3e-18 98.2 139 45.3
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 3.7e-18 96.7 252 31.7
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 1.6e-16 91.3 178 39.3
FvH4_5g27493 Fragaria vesca HOM05D005661 ORTHO05D007997 3.5e-16 90.1 255 32.5
Ca_29126_v3 Cicer arietinum L. HOM05D005661 ORTHO05D148461 8.6e-15 85.5 218 30.3
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 2.8e-13 80.5 108 50.0
FvH4_5g27491 Fragaria vesca HOM05D005661 ORTHO05D046262 1.1e-09 68.6 87 52.9
CAN.G242.16 Capsicum annuum HOM05D005661 ORTHO05D007997 1.9e-09 67.8 59 50.8
HanXRQChr14g0444001 Helianthus annuus HOM05D005661 ORTHO05D007997 2.4e-09 67.4 61 50.8
Lj5A292T54 Lonicera japonica HOM05D005661 ORTHO05D007997 4.1e-09 66.6 49 63.3
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 2.5e-06 57.4 38 71.1


User provided reference genes

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