Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_7910 Physcomitrium patens HOM05D000096 ORTHO05D000045 5.7e-39 163.7 78 100.0
Rhsim06G0045600 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.4e-13 79.3 76 40.8
Rhsim04G0168000 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.4e-13 78.6 76 40.8
RhsimUnG0164500 Rhododendron simsii HOM05D000096 ORTHO05D000045 3.2e-13 78.2 76 40.8
Rhsim11G0005800 Rhododendron simsii HOM05D000096 ORTHO05D000045 4.1e-13 77.8 76 39.5
Rhsim12G0094200 Rhododendron simsii HOM05D000096 ORTHO05D000045 3.5e-12 74.7 76 38.2
Rhsim07G0140000 Rhododendron simsii HOM05D000096 ORTHO05D000045 5.9e-12 73.9 73 38.4
CSS0031375 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 7.8e-12 73.6 76 39.5
CSS0038568 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 1.0e-11 73.2 76 38.2
CSS0010303 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 1.7e-11 72.4 76 38.2
CSS0017814 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 2.9e-11 71.6 76 38.2
CSS0041048 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 6.6e-11 70.5 76 38.2
Rhsim11G0010700 Rhododendron simsii HOM05D000096 ORTHO05D000045 8.6e-11 70.1 73 39.7
Rhsim02G0178000 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.5e-10 69.3 73 38.4
Actinidia03819 Actinidia chinensis HOM05D000096 ORTHO05D000045 3.3e-10 68.2 70 40.0
Rhsim01G0084900 Rhododendron simsii HOM05D000096 ORTHO05D000045 3.3e-10 68.2 73 38.4
PSO782G2258 Papaver somniferum HOM05D000096 ORTHO05D000045 7.3e-10 67.0 73 42.5
PSO700G0199 Papaver somniferum HOM05D000096 ORTHO05D000045 1.6e-09 65.9 75 38.7
Oeu021551.1 Olea europaea HOM05D000096 ORTHO05D000045 2.8e-09 65.1 75 33.3
PSO170G1957 Papaver somniferum HOM05D000096 ORTHO05D000045 2.8e-09 65.1 74 39.2
Rhsim02G0030300 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.8e-09 65.1 61 41.0
PSO170G2293 Papaver somniferum HOM05D000096 ORTHO05D000045 8.0e-09 63.5 74 41.9
CiPaw.07G195500 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-08 63.2 71 39.4
PSO170G3453 Papaver somniferum HOM05D000096 ORTHO05D000045 1.0e-08 63.2 63 46.0
PSO675G2920 Papaver somniferum HOM05D000096 ORTHO05D000045 1.0e-08 63.2 69 40.6
PSO063G6331 Papaver somniferum HOM05D000096 ORTHO05D000045 1.4e-08 62.8 74 39.2
PSO832G2110 Papaver somniferum HOM05D000096 ORTHO05D000045 1.4e-08 62.8 75 37.3
PSO478G3331 Papaver somniferum HOM05D000096 ORTHO05D000045 1.8e-08 62.4 73 39.7
Oeu038148.1 Olea europaea HOM05D000096 ORTHO05D000045 4.0e-08 61.2 71 32.4
PSO170G4992 Papaver somniferum HOM05D000096 ORTHO05D000045 4.0e-08 61.2 75 36.0
Oeu005210.1 Olea europaea HOM05D000096 ORTHO05D000045 5.2e-08 60.8 71 33.8
PSO063G7304 Papaver somniferum HOM05D000096 ORTHO05D000045 6.8e-08 60.5 74 39.2
Rhsim07G0181300 Rhododendron simsii HOM05D000096 ORTHO05D000045 6.8e-08 60.5 63 36.5
Rhsim07G0171400 Rhododendron simsii HOM05D000096 ORTHO05D000045 8.9e-08 60.1 61 37.7
Glyma.10G108221 Glycine max HOM05D000096 ORTHO05D000045 1.2e-07 59.7 70 41.4
PSO063G4219 Papaver somniferum HOM05D000096 ORTHO05D000045 1.2e-07 59.7 75 37.3
ECA236G4162 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-07 58.5 70 35.7
ECA248G2731 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-07 58.5 70 32.9
COL.COLO4_25375 Corchorus olitorius HOM05D000096 ORTHO05D000045 3.4e-07 58.2 70 35.7
Glyma.05G078600 Glycine max HOM05D000096 ORTHO05D000045 3.4e-07 58.2 70 37.1
Atru.chr10.1792 Acer truncatum HOM05D000096 ORTHO05D000045 4.4e-07 57.8 71 35.2
ECA233G4118 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.4e-07 57.8 70 32.9
ECA246G1553 Erigeron canadensis HOM05D000006 ORTHO05D000045 4.4e-07 57.8 70 32.9
TPR.G1782 Trifolium pratense HOM05D000096 ORTHO05D000045 4.4e-07 57.8 70 40.0
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.8e-07 57.4 71 38.0
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.8e-07 57.4 71 38.0
ECA248G3078 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.8e-07 57.4 70 35.7
PSO063G4809 Papaver somniferum HOM05D000096 ORTHO05D000045 5.8e-07 57.4 74 36.5
Pp3c15_9500 Physcomitrium patens HOM05D000096 ORTHO05D000045 5.8e-07 57.4 79 36.7
ECA234G1666 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.5e-07 57.0 70 35.7
ECA240G0922 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.5e-07 57.0 70 32.9
ECA247G1956 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.5e-07 57.0 70 34.3
Hma1.2p1_1453F.1_g284330 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 7.5e-07 57.0 74 32.4
Lj4g0012890 Lotus japonicus HOM05D000096 ORTHO05D000045 7.5e-07 57.0 68 35.3
PSO017G0292 Papaver somniferum HOM05D000096 ORTHO05D000045 7.5e-07 57.0 75 37.3
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 7.5e-07 57.0 70 34.3
QL11p017918 Quercus lobata HOM05D000096 ORTHO05D000045 7.5e-07 57.0 70 34.3
QL11p040805 Quercus lobata HOM05D000096 ORTHO05D000045 7.5e-07 57.0 70 34.3
CSS0000217 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 9.8e-07 56.6 76 32.9
Lalb_Chr09g0328691 Lupinus albus HOM05D000096 ORTHO05D000045 9.8e-07 56.6 73 35.6
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.3e-06 56.2 70 35.7
PSO063G3034 Papaver somniferum HOM05D000096 ORTHO05D000045 1.3e-06 56.2 76 36.8
PSO170G3273 Papaver somniferum HOM05D000096 ORTHO05D000045 1.7e-06 55.8 74 36.5
SGA_v2.0_scaffold257G45688 Striga asiatica HOM05D000011 ORTHO05D000018 1.7e-06 55.8 73 32.9
Aqoxy3G01378 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 2.2e-06 55.5 74 39.2
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.2e-06 55.5 71 33.8
Lj6g0012163 Lotus japonicus HOM05D000096 ORTHO05D000045 2.2e-06 55.5 70 35.7
PSO478G3149 Papaver somniferum HOM05D000096 ORTHO05D000045 2.2e-06 55.5 73 35.6
CiPaw.06G004900 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.9e-06 55.1 71 33.8
ECA233G1381 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.9e-06 55.1 70 32.9
PSO832G3507 Papaver somniferum HOM05D000096 ORTHO05D000045 2.9e-06 55.1 75 33.3
TPR.G30473 Trifolium pratense HOM05D000096 ORTHO05D000045 2.9e-06 55.1 73 35.6
CiPaw.05G146400 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.7e-06 54.7 71 33.8
COL.COLO4_04570 Corchorus olitorius HOM05D000096 ORTHO05D000045 3.7e-06 54.7 70 34.3
QL10p029030 Quercus lobata HOM05D000096 ORTHO05D000045 3.7e-06 54.7 67 34.3
CAN.G419.26 Capsicum annuum HOM05D000096 ORTHO05D000045 4.9e-06 54.3 73 34.2
Cc07_g19800 Coffea canephora HOM05D000096 ORTHO05D000045 4.9e-06 54.3 73 30.1
CiPaw.07G018800 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.4e-06 53.9 71 32.4
HanXRQChr11g0340091 Helianthus annuus HOM05D000096 ORTHO05D000045 6.4e-06 53.9 70 32.9
COL.COLO4_33117 Corchorus olitorius HOM05D000096 ORTHO05D000045 8.3e-06 53.5 71 33.8
ECA236G4768 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.3e-06 53.5 74 31.1
PSO357G0008 Papaver somniferum HOM05D000096 ORTHO05D000045 8.3e-06 53.5 76 35.5
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 8.3e-06 53.5 70 34.3


User provided reference genes

Program Settings