Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 4.7e-199 698.0 432 100.0
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 2.9e-39 167.2 324 34.3
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 3.6e-26 123.6 308 28.2
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 4.0e-17 93.6 228 30.3
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 4.9e-15 86.7 314 24.5
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 8.4e-15 85.9 336 24.1
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 4.2e-14 83.6 299 24.7
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 9.3e-14 82.4 295 25.1
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 1.2e-13 82.0 304 23.0
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.1e-13 81.3 314 24.5
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 2.1e-13 81.3 295 25.1
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 3.5e-13 80.5 304 23.7
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 4.6e-13 80.1 311 23.5
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 4.6e-13 80.1 314 24.2
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 1.7e-12 78.2 311 23.2
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 1.7e-12 78.2 311 23.2
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 2.3e-12 77.8 408 22.5
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 3.9e-12 77.0 311 22.8
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 3.9e-12 77.0 306 23.2
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 3.9e-12 77.0 310 23.5
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 3.9e-12 77.0 311 22.8
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 6.6e-12 76.3 299 23.7
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 8.7e-12 75.9 306 22.9
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 8.7e-12 75.9 304 22.4
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 1.1e-11 75.5 296 24.0
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 1.5e-11 75.1 299 23.7
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.5e-11 75.1 325 23.4
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 1.9e-11 74.7 296 23.6
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 2.5e-11 74.3 289 23.9
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 2.5e-11 74.3 302 22.2
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 2.5e-11 74.3 299 23.7
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 4.3e-11 73.6 317 23.7
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 4.3e-11 73.6 287 24.4
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 5.6e-11 73.2 311 22.2
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 5.6e-11 73.2 293 22.9
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 5.6e-11 73.2 331 22.7
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 5.6e-11 73.2 304 22.4
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 5.6e-11 73.2 319 22.6
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 7.3e-11 72.8 311 21.9
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 1.3e-10 72.0 320 23.4
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 1.3e-10 72.0 313 22.0
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 1.6e-10 71.6 345 22.6
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.6e-10 71.6 313 21.7
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 1.6e-10 71.6 295 23.4
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 2.1e-10 71.2 360 22.2
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 2.1e-10 71.2 310 23.2
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 2.1e-10 71.2 303 22.4
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 3.6e-10 70.5 309 23.3
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 3.6e-10 70.5 303 23.4
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 4.8e-10 70.1 321 24.3
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 4.8e-10 70.1 318 23.6
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 4.8e-10 70.1 319 24.8
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 4.8e-10 70.1 302 22.8
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 6.2e-10 69.7 304 22.7
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 6.2e-10 69.7 293 23.2
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 6.2e-10 69.7 347 21.3
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 6.2e-10 69.7 369 21.7
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 8.1e-10 69.3 326 21.8
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 8.1e-10 69.3 290 23.8
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.1e-09 68.9 298 23.5
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 1.4e-09 68.6 305 22.3
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 1.8e-09 68.2 285 23.2
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 1.8e-09 68.2 307 21.8
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 1.8e-09 68.2 404 23.3
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 1.8e-09 68.2 400 22.2
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 1.8e-09 68.2 327 22.0
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 1.8e-09 68.2 313 21.7
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 2.4e-09 67.8 300 21.3
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 3.1e-09 67.4 319 21.9
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 5.3e-09 66.6 162 29.0
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 5.3e-09 66.6 358 22.3
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 5.3e-09 66.6 314 22.0
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 5.3e-09 66.6 145 28.3
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 6.9e-09 66.2 314 22.0
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 6.9e-09 66.2 292 22.9
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 9.0e-09 65.9 297 22.6
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 9.0e-09 65.9 129 31.0
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 9.0e-09 65.9 129 31.0
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 1.2e-08 65.5 301 22.9
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 1.2e-08 65.5 311 21.9
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 1.5e-08 65.1 297 22.2
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 2.0e-08 64.7 307 21.8
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 3.4e-08 63.9 307 21.5
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 3.4e-08 63.9 324 22.5
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 4.4e-08 63.5 293 22.2
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 4.4e-08 63.5 134 29.9
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 4.4e-08 63.5 134 29.9
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 4.4e-08 63.5 126 29.4
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 5.8e-08 63.2 302 21.5
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 7.6e-08 62.8 129 30.2
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 7.6e-08 62.8 129 31.0
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 9.9e-08 62.4 127 29.1
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 1.3e-07 62.0 299 21.7
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 3.8e-07 60.5 283 22.3
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 6.4e-07 59.7 287 23.0
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 8.4e-07 59.3 116 31.0
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 1.1e-06 58.9 303 20.8
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 1.1e-06 58.9 360 20.6
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 1.1e-06 58.9 134 27.6
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 1.4e-06 58.5 296 22.3
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 1.4e-06 58.5 341 20.5
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 1.9e-06 58.2 303 20.5
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 2.4e-06 57.8 114 28.9
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 5.4e-06 56.6 305 22.0
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 7.1e-06 56.2 136 26.5


User provided reference genes

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