Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 2.0e-138 495.7 242 100.0
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 2.8e-44 183.0 152 59.2
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 2.4e-43 179.9 117 70.9
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 1.5e-42 177.2 225 45.8
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 2.0e-42 176.8 225 45.8
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 4.5e-42 175.6 191 48.2
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 2.2e-41 173.3 198 47.5
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 3.8e-41 172.6 200 47.0
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 5.0e-41 172.2 190 46.3
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 1.1e-40 171.0 189 48.7
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 3.2e-40 169.5 191 46.6
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 3.2e-40 169.5 189 47.6
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 5.5e-40 168.7 195 46.7
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 7.2e-40 168.3 194 47.9
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 7.2e-40 168.3 200 46.0
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 9.4e-40 167.9 196 46.9
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 1.2e-39 167.5 191 47.6
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 1.6e-39 167.2 194 46.9
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 3.6e-39 166.0 192 46.4
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 4.7e-39 165.6 189 46.0
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 4.7e-39 165.6 196 45.4
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 4.7e-39 165.6 190 47.4
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 6.1e-39 165.2 193 47.7
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 6.1e-39 165.2 191 45.0
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 6.1e-39 165.2 191 45.0
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 6.1e-39 165.2 201 45.3
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 7.9e-39 164.9 191 45.5
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 7.9e-39 164.9 191 46.1
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 7.9e-39 164.9 192 45.8
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 7.9e-39 164.9 190 48.9
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 7.9e-39 164.9 120 63.3
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 1.0e-38 164.5 190 48.9
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 1.8e-38 163.7 192 44.3
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 1.8e-38 163.7 191 44.0
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 2.3e-38 163.3 189 47.1
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 2.3e-38 163.3 195 45.1
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 3.0e-38 162.9 196 45.9
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 3.0e-38 162.9 195 46.2
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 3.0e-38 162.9 191 44.0
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 3.0e-38 162.9 189 47.1
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 3.9e-38 162.5 189 47.1
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 5.1e-38 162.2 195 45.6
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 8.8e-38 161.4 188 45.7
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 8.8e-38 161.4 191 46.1
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 1.1e-37 161.0 189 46.0
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 1.1e-37 161.0 189 47.1
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 1.5e-37 160.6 116 63.8
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 3.3e-37 159.5 128 57.0
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 3.3e-37 159.5 126 57.1
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 3.3e-37 159.5 191 44.0
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 4.4e-37 159.1 191 42.9
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 5.7e-37 158.7 201 43.3
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 7.4e-37 158.3 188 43.6
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 7.4e-37 158.3 193 43.5
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 1.3e-36 157.5 121 59.5
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 1.3e-36 157.5 120 60.8
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 1.3e-36 157.5 129 58.1
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 1.3e-36 157.5 117 60.7
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 1.7e-36 157.1 117 61.5
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 2.2e-36 156.8 193 43.0
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 2.2e-36 156.8 195 44.6
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 3.7e-36 156.0 116 62.1
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 4.8e-36 155.6 126 59.5
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 6.3e-36 155.2 189 44.4
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 1.1e-35 154.5 140 52.9
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 1.1e-35 154.5 122 59.0
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 1.1e-35 154.5 117 60.7
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 1.4e-35 154.1 196 42.3
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 1.4e-35 154.1 132 56.8
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 1.8e-35 153.7 117 59.8
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 1.8e-35 153.7 195 46.2
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 2.4e-35 153.3 207 40.1
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 2.4e-35 153.3 137 54.0
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 2.4e-35 153.3 117 59.0
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 4.1e-35 152.5 137 54.0
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 4.1e-35 152.5 117 60.7
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 5.3e-35 152.1 117 59.8
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 7.0e-35 151.8 117 59.0
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 9.1e-35 151.4 117 59.0
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 9.1e-35 151.4 117 59.0
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 1.2e-34 151.0 127 55.1
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 1.2e-34 151.0 112 61.6
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 1.2e-34 151.0 112 61.6
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 1.6e-34 150.6 124 58.1
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 1.6e-34 150.6 124 58.1
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 2.0e-34 150.2 191 42.9
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 2.0e-34 150.2 117 59.8
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 2.6e-34 149.8 134 53.0
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 2.6e-34 149.8 176 48.3
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 3.5e-34 149.4 189 42.9
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 5.9e-34 148.7 123 56.9
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 1.0e-33 147.9 117 58.1
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 1.0e-33 147.9 122 54.9
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 1.3e-33 147.5 120 58.3
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 1.7e-33 147.1 127 54.3
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 2.2e-33 146.7 112 61.6
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 2.2e-33 146.7 112 57.1
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 2.9e-33 146.4 177 46.9
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 8.5e-33 144.8 120 55.8
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 7.2e-32 141.7 110 58.2
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 1.2e-31 141.0 101 61.4
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 3.0e-30 136.3 136 50.7
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 2.8e-28 129.8 108 58.3
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 2.7e-26 123.2 111 51.4
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 3.5e-26 122.9 112 52.7
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 8.5e-25 118.2 231 34.2
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 2.2e-20 103.6 110 46.4
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 1.4e-19 100.9 144 38.9
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 3.1e-19 99.8 74 60.8
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 1.6e-18 97.4 72 56.9
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 4.5e-18 95.9 78 56.4
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 4.7e-15 85.9 70 54.3
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 5.4e-11 72.4 73 46.6
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 1.1e-08 64.7 79 40.5
MD08G1060400 Malus domestica HOM05D006792 ORTHO05D008489 2.8e-07 60.1 44 59.1
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 8.0e-07 58.5 57 45.6
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 2.3e-06 57.0 118 33.1
Os11g0597500 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 5.2e-06 55.8 63 46.0


User provided reference genes

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