Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 0.0e+00 1116.3 573 100.0
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 3.2e-195 685.6 611 62.5
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 1.1e-115 421.4 558 43.7
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 2.7e-114 416.8 558 43.9
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 6.1e-114 415.6 562 42.7
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 1.0e-113 414.8 560 43.8
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 1.8e-113 414.1 561 42.2
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 5.2e-113 412.5 554 43.0
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 6.8e-113 412.1 570 43.2
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 6.8e-113 412.1 584 42.3
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 8.8e-113 411.8 578 43.6
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 8.8e-113 411.8 562 42.3
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 1.2e-112 411.4 561 42.6
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.2e-112 411.4 571 42.4
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.5e-112 411.0 557 42.7
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 3.4e-112 409.8 574 41.1
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 9.8e-112 408.3 561 42.1
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 1.3e-111 407.9 567 42.2
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 2.2e-111 407.1 562 42.0
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 4.8e-111 406.0 568 41.7
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 1.1e-110 404.8 557 42.2
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 1.1e-110 404.8 561 42.1
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 1.1e-110 404.8 562 42.7
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 1.4e-110 404.4 566 42.4
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 1.4e-110 404.4 562 42.5
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.8e-110 404.1 592 42.2
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 4.1e-110 402.9 561 43.9
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 7.0e-110 402.1 559 42.9
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 9.1e-110 401.7 561 41.7
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 9.1e-110 401.7 574 42.2
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 1.2e-109 401.4 576 42.4
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 4.5e-109 399.4 566 42.4
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 4.5e-109 399.4 565 42.5
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 7.7e-109 398.7 553 41.2
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 7.7e-109 398.7 579 41.6
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 1.0e-108 398.3 567 41.6
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 1.0e-108 398.3 551 41.4
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 1.3e-108 397.9 571 41.5
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 1.3e-108 397.9 597 40.2
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 1.7e-108 397.5 554 42.1
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 1.7e-108 397.5 562 41.6
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 1.7e-108 397.5 555 42.2
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 2.3e-108 397.1 555 40.9
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 2.9e-108 396.7 550 43.5
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 3.8e-108 396.4 585 42.4
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 1.1e-107 394.8 577 40.7
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.1e-107 394.8 548 43.1
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 4.2e-107 392.9 565 42.8
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 7.2e-107 392.1 567 41.6
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 1.6e-106 391.0 553 43.2
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 2.1e-106 390.6 564 40.8
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 1.8e-105 387.5 584 41.1
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 4.0e-105 386.3 580 42.1
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 4.0e-105 386.3 536 43.1
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 5.2e-105 386.0 573 40.8
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 2.0e-104 384.0 603 41.3
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 2.0e-104 384.0 539 40.3
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 2.6e-104 383.6 598 40.0
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 3.4e-104 383.3 595 40.0
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 5.7e-104 382.5 571 40.3
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 1.2e-101 374.8 615 39.7
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 1.7e-100 370.9 541 41.2
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 5.6e-99 365.9 514 43.2
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 2.8e-98 363.6 574 38.2
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 1.7e-95 354.4 615 37.7
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 4.9e-95 352.8 579 37.8
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 1.4e-94 351.3 615 37.9
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 5.4e-94 349.4 495 41.8
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 9.2e-94 348.6 535 40.6
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.0e-92 345.1 494 42.7
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 1.7e-92 344.4 640 37.8
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 3.9e-92 343.2 446 45.5
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 9.5e-91 338.6 529 41.2
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 1.4e-89 334.7 505 40.4
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 4.9e-87 326.2 399 45.6
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 8.3e-87 325.5 577 38.3
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 7.0e-86 322.4 368 48.6
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 2.1e-85 320.9 562 36.8
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 6.6e-76 289.3 583 35.3
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 3.6e-74 283.5 491 37.1
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 9.9e-72 275.4 343 44.9
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 3.5e-69 266.9 430 38.8
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 1.9e-62 244.6 382 39.8
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 2.5e-59 234.2 365 40.0
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 1.3e-58 231.9 378 41.5
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 2.7e-53 214.2 266 45.1
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 1.9e-51 208.0 284 42.6
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.8e-49 201.4 277 41.9
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 9.9e-48 195.7 439 34.9
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 8.4e-47 192.6 244 47.1
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 2.0e-40 171.4 282 38.3
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.7e-37 161.0 171 47.4
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 6.0e-37 159.8 258 40.7
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 1.5e-32 145.2 164 49.4
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.0e-28 132.5 223 39.5
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 3.4e-24 117.5 193 38.3
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 7.9e-21 106.3 197 34.5
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 7.9e-21 106.3 197 34.5
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 2.4e-17 94.7 113 41.6
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.5e-16 92.0 111 41.4
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 2.6e-16 91.3 138 42.8
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.0e-15 89.4 203 32.0
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 1.7e-15 88.6 222 30.6
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 7.2e-14 83.2 81 46.9
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 2.3e-12 78.2 104 37.5
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 1.4e-09 68.9 176 31.2
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 4.1e-09 67.4 92 45.7


User provided reference genes

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