Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_4390 Physcomitrium patens HOM05D004203 ORTHO05D004830 8.6e-41 169.9 84 100.0
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 1.7e-20 102.4 81 60.5
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 1.2e-10 69.7 77 40.3
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.7e-10 68.6 77 41.6
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 1.7e-09 65.9 73 43.8
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 1.5e-08 62.8 72 40.3
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 2.5e-08 62.0 76 38.2
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 3.3e-08 61.6 72 37.5
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 3.3e-08 61.6 73 38.4
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.3e-08 61.6 72 40.3
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 5.6e-08 60.8 72 38.9
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 7.3e-08 60.5 72 37.5
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 7.3e-08 60.5 72 38.9
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 7.3e-08 60.5 72 37.5
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 9.6e-08 60.1 80 35.0
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 9.6e-08 60.1 76 36.8
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 1.2e-07 59.7 73 35.6
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 1.2e-07 59.7 72 36.1
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 1.6e-07 59.3 72 36.1
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 1.6e-07 59.3 72 36.1
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 1.6e-07 59.3 77 35.1
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 1.6e-07 59.3 72 38.9
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 1.6e-07 59.3 76 36.8
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 1.6e-07 59.3 61 45.9
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 2.1e-07 58.9 72 37.5
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.1e-07 58.9 71 38.0
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 2.1e-07 58.9 71 38.0
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 2.1e-07 58.9 71 38.0
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 2.1e-07 58.9 66 40.9
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 2.1e-07 58.9 72 40.3
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 2.8e-07 58.5 72 40.3
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 2.8e-07 58.5 72 36.1
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 2.8e-07 58.5 72 36.1
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 2.8e-07 58.5 73 37.0
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 2.8e-07 58.5 82 36.6
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 3.6e-07 58.2 77 33.8
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 3.6e-07 58.2 77 33.8
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 3.6e-07 58.2 77 33.8
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 3.6e-07 58.2 72 38.9
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 4.7e-07 57.8 72 36.1
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 4.7e-07 57.8 73 35.6
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 4.7e-07 57.8 72 36.1
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 4.7e-07 57.8 73 37.0
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 4.7e-07 57.8 79 36.7
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 4.7e-07 57.8 73 37.0
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 6.2e-07 57.4 72 37.5
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 6.2e-07 57.4 72 37.5
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 6.2e-07 57.4 72 36.1
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 6.2e-07 57.4 72 37.5
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 6.2e-07 57.4 72 37.5
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 6.2e-07 57.4 80 33.8
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 6.2e-07 57.4 72 34.7
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 8.1e-07 57.0 71 36.6
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 8.1e-07 57.0 72 34.7
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 8.1e-07 57.0 69 39.1
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 8.1e-07 57.0 72 36.1
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 8.1e-07 57.0 76 38.2
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 1.1e-06 56.6 71 36.6
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.1e-06 56.6 72 36.1
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 1.1e-06 56.6 72 36.1
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-06 56.2 72 37.5
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-06 56.2 72 37.5
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 1.4e-06 56.2 72 37.5
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 1.4e-06 56.2 72 37.5
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.4e-06 56.2 80 32.5
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 1.4e-06 56.2 72 34.7
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 1.4e-06 56.2 72 36.1
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 1.8e-06 55.8 77 32.5
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 1.8e-06 55.8 72 33.3
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.8e-06 55.8 80 32.5
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.8e-06 55.8 73 37.0
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.8e-06 55.8 73 37.0
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 1.8e-06 55.8 72 34.7
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 1.8e-06 55.8 73 35.6
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 2.4e-06 55.5 72 34.7
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 2.4e-06 55.5 60 43.3
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 3.1e-06 55.1 60 45.0
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 3.1e-06 55.1 71 35.2
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 3.1e-06 55.1 73 34.2
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 3.1e-06 55.1 80 35.0
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 3.1e-06 55.1 72 33.3
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 4.0e-06 54.7 72 34.7
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 4.0e-06 54.7 72 34.7
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.0e-06 54.7 69 33.3
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 4.0e-06 54.7 73 34.2
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 5.2e-06 54.3 71 33.8
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 5.2e-06 54.3 71 36.6
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 5.2e-06 54.3 77 36.4
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 6.9e-06 53.9 77 32.5
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 6.9e-06 53.9 71 35.2
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 6.9e-06 53.9 72 34.7
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 6.9e-06 53.9 72 34.7
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 6.9e-06 53.9 60 38.3
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 6.9e-06 53.9 72 34.7
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 9.0e-06 53.5 71 36.6
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 9.0e-06 53.5 72 36.1
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 9.0e-06 53.5 71 35.2


User provided reference genes

Program Settings