Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 8.1e-132 473.8 245 100.0
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.2e-97 359.4 238 75.6
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 4.7e-71 271.9 234 61.1
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 2.9e-65 252.7 245 51.0
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 8.0e-63 244.6 239 52.3
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.0e-62 244.2 239 51.9
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.8e-62 243.4 236 53.4
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 2.3e-62 243.0 239 51.9
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.3e-62 243.0 239 51.9
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 3.0e-62 242.7 239 51.5
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 3.0e-62 242.7 239 51.9
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 5.2e-62 241.9 240 50.4
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 5.2e-62 241.9 239 51.5
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 6.8e-62 241.5 239 51.5
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 6.8e-62 241.5 239 50.6
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 1.5e-61 240.4 239 50.2
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.5e-61 240.4 239 51.0
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.5e-61 240.4 239 49.4
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 2.0e-61 240.0 239 52.7
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 2.6e-61 239.6 244 50.4
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 2.6e-61 239.6 244 50.4
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 2.6e-61 239.6 244 50.4
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 2.6e-61 239.6 239 51.5
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 3.4e-61 239.2 244 50.0
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 3.4e-61 239.2 240 51.7
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 3.4e-61 239.2 239 50.2
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 3.4e-61 239.2 242 50.0
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 4.4e-61 238.8 240 50.0
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 4.4e-61 238.8 240 50.0
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 7.5e-61 238.0 239 50.6
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 7.5e-61 238.0 244 49.6
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 7.5e-61 238.0 239 50.6
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 7.5e-61 238.0 239 50.2
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 9.8e-61 237.7 240 51.2
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 9.8e-61 237.7 248 49.6
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 1.3e-60 237.3 244 49.6
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.3e-60 237.3 239 51.0
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 1.3e-60 237.3 239 49.4
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.3e-60 237.3 246 49.6
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.3e-60 237.3 244 50.0
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 1.7e-60 236.9 240 49.2
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 1.7e-60 236.9 239 50.6
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 1.7e-60 236.9 239 49.8
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 2.2e-60 236.5 239 50.6
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 2.8e-60 236.1 244 49.2
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 2.8e-60 236.1 244 49.6
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 2.8e-60 236.1 239 51.0
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 3.7e-60 235.7 239 51.0
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 3.7e-60 235.7 239 49.8
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 3.7e-60 235.7 239 50.6
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 3.7e-60 235.7 239 49.8
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 4.8e-60 235.3 239 50.6
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 6.3e-60 235.0 239 52.3
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 6.3e-60 235.0 239 50.6
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 8.3e-60 234.6 244 49.2
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 8.3e-60 234.6 240 48.8
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 8.3e-60 234.6 239 49.0
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.1e-59 234.2 235 52.3
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 1.1e-59 234.2 239 49.8
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 1.1e-59 234.2 239 49.8
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 2.4e-59 233.0 240 48.8
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 2.4e-59 233.0 235 53.6
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 2.4e-59 233.0 239 49.8
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 2.4e-59 233.0 239 49.8
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 4.1e-59 232.3 239 50.2
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 5.4e-59 231.9 244 48.0
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 5.4e-59 231.9 244 48.0
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 7.0e-59 231.5 239 50.6
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 7.0e-59 231.5 239 49.8
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 7.0e-59 231.5 240 48.3
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 1.2e-58 230.7 239 49.4
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 2.0e-58 229.9 247 47.8
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 2.7e-58 229.6 235 50.2
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 3.5e-58 229.2 237 49.4
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 3.5e-58 229.2 244 49.2
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 3.5e-58 229.2 244 47.5
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 3.5e-58 229.2 239 48.5
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 4.5e-58 228.8 239 50.2
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.0e-57 227.6 240 47.9
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.7e-57 226.9 238 48.3
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.1e-56 224.2 251 47.0
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 1.9e-56 223.4 240 48.3
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 1.9e-56 223.4 236 49.2
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 2.5e-56 223.0 261 48.3
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 7.2e-56 221.5 247 47.8
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 8.0e-55 218.0 239 47.7
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 6.8e-54 214.9 246 45.5
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 3.4e-53 212.6 213 54.0
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 3.1e-51 206.1 203 52.7
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 5.4e-51 205.3 208 50.5
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 7.8e-50 201.4 209 49.3
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 2.3e-49 199.9 239 44.4
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 5.0e-49 198.7 240 43.3
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 1.6e-47 193.7 213 49.3
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.0e-46 191.0 189 49.7
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.4e-46 190.7 202 51.0
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 1.4e-46 190.7 182 53.8
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 2.3e-46 189.9 240 42.9
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 6.8e-46 188.3 253 46.2
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 9.8e-45 184.5 193 47.7
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 1.2e-42 177.6 236 41.5
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 3.9e-41 172.6 236 41.1
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 6.8e-38 161.8 239 39.7
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 1.0e-33 147.9 154 47.4
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 8.3e-28 128.3 148 47.3
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 1.4e-27 127.5 124 52.4
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 2.4e-27 126.7 232 37.9
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 7.1e-27 125.2 115 50.4
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 7.1e-27 125.2 151 42.4
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 9.2e-27 124.8 148 45.9
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 9.2e-27 124.8 148 45.9
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 1.6e-26 124.0 200 39.0
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 4.6e-26 122.5 114 54.4
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.8e-22 110.5 90 61.1
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 1.9e-19 100.5 119 44.5
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.5e-16 90.9 88 51.1
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 2.5e-16 90.1 92 48.9
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 6.2e-15 85.5 80 51.2
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 9.3e-11 71.6 160 30.6


User provided reference genes

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