Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 1.2e-294 1015.8 521 100.0
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 6.6e-107 392.1 413 53.0
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 9.5e-106 388.3 422 51.2
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 2.8e-105 386.7 399 52.6
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 6.2e-105 385.6 412 51.0
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 3.1e-104 383.3 462 46.5
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 3.1e-104 383.3 420 51.2
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 6.8e-104 382.1 422 50.5
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 2.0e-103 380.6 414 50.7
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 3.4e-103 379.8 412 49.8
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 4.4e-103 379.4 349 56.2
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 9.8e-103 378.3 411 50.9
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 1.3e-102 377.9 423 49.6
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.3e-102 377.9 416 49.5
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 1.7e-102 377.5 422 49.5
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 3.7e-102 376.3 425 49.4
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 3.7e-102 376.3 411 50.4
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 6.4e-102 375.6 431 49.0
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 1.9e-101 374.0 430 49.1
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 2.4e-101 373.6 434 48.6
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 5.4e-101 372.5 374 52.9
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 7.1e-101 372.1 437 48.7
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 2.1e-100 370.5 420 49.8
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 2.7e-100 370.2 408 50.7
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 2.7e-100 370.2 423 48.2
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.0e-99 368.2 431 48.3
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 1.7e-99 367.5 420 50.2
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 2.3e-99 367.1 426 49.3
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 3.0e-99 366.7 437 47.8
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 6.6e-99 365.5 422 49.5
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 1.5e-98 364.4 415 49.9
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 5.6e-98 362.5 425 48.5
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 9.5e-98 361.7 418 49.8
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 2.8e-97 360.1 433 49.7
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 8.1e-97 358.6 415 49.2
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 8.1e-97 358.6 418 49.3
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 4.0e-96 356.3 383 52.7
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 5.2e-96 355.9 420 48.8
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 6.8e-96 355.5 420 47.6
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 8.9e-96 355.1 454 47.6
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 8.9e-96 355.1 426 47.7
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 8.9e-96 355.1 415 49.6
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 3.4e-95 353.2 420 48.6
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 3.4e-95 353.2 417 50.6
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 7.6e-95 352.1 421 47.0
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 9.9e-95 351.7 420 47.4
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 1.3e-94 351.3 467 43.7
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 1.3e-94 351.3 422 49.1
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 1.7e-94 350.9 366 53.3
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 1.7e-94 350.9 409 48.4
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 2.9e-94 350.1 422 48.3
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 3.7e-94 349.7 374 50.0
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 8.3e-94 348.6 381 51.7
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 2.4e-93 347.1 400 48.2
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 2.4e-93 347.1 455 45.9
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 3.2e-93 346.7 421 47.7
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 3.5e-92 343.2 381 51.2
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 7.8e-92 342.0 421 46.6
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 1.7e-91 340.9 381 50.1
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 9.6e-90 335.1 369 49.9
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 1.2e-89 334.7 386 48.7
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 1.6e-89 334.3 427 45.9
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 1.3e-83 314.7 333 53.5
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.3e-83 313.9 439 44.6
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.4e-80 304.7 407 42.5
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.4e-80 304.7 415 44.8
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 7.6e-79 298.9 410 42.2
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 2.4e-77 293.9 371 45.3
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 3.2e-77 293.5 347 48.1
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 1.5e-71 274.6 316 48.4
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 2.0e-71 274.2 432 39.4
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 2.2e-70 270.8 343 45.2
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 2.2e-70 270.8 423 41.1
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 4.9e-70 269.6 430 40.0
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 2.7e-68 263.8 326 46.6
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 1.3e-65 255.0 323 45.8
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 1.6e-65 254.6 303 47.9
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 6.5e-62 242.7 308 45.1
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 2.7e-60 237.3 390 41.3
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.4e-53 214.9 212 54.2
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 3.0e-51 207.2 439 35.8
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 3.9e-51 206.8 287 43.2
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 3.2e-45 187.2 222 45.0
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.2e-44 185.3 221 44.3
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.6e-44 184.9 172 56.4
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.3e-38 165.2 198 45.5
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 2.8e-33 147.5 285 35.1
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 8.5e-30 136.0 112 61.6
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 2.2e-25 121.3 195 39.0
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.4e-24 117.9 111 52.3
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.4e-24 117.9 111 52.3
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 4.1e-24 117.1 173 36.4
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 7.0e-24 116.3 113 54.9
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 1.5e-21 108.6 123 47.2
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 5.5e-21 106.7 142 46.5
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 5.2e-19 100.1 77 66.2
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 2.0e-18 98.2 138 44.2
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.5e-10 72.0 83 47.0
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 7.5e-10 69.7 61 54.1
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 1.3e-09 68.9 65 46.2
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 9.2e-08 62.8 70 47.1
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 2.0e-07 61.6 39 82.1


User provided reference genes

Program Settings