Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_26240 Physcomitrium patens HOM05D005040 ORTHO05D005984 4.1e-81 304.7 153 100.0
Mapoly0002s0050 Marchantia polymorpha HOM05D005040 ORTHO05D005984 4.2e-54 214.9 153 67.3
Pp3c17_23510 Physcomitrium patens HOM05D005040 ORTHO05D005984 1.4e-49 199.9 150 69.3
SEGI_18303 Sequoiadendron giganteum HOM05D005040 ORTHO05D005984 5.9e-48 194.5 149 60.4
CBR_g53740 Chara braunii HOM05D005040 ORTHO05D005984 1.9e-46 189.5 149 57.7
Lj9C507G12 Lonicera japonica HOM05D005040 ORTHO05D005984 1.6e-45 186.4 149 56.4
Cc04_g03490 Coffea canephora HOM05D005040 ORTHO05D005984 2.7e-45 185.7 153 55.6
Gohir.A09G083300 Gossypium hirsutum HOM05D005040 ORTHO05D005984 2.7e-45 185.7 153 57.5
Eucgr.J02995 Eucalyptus grandis HOM05D005040 ORTHO05D005984 4.7e-45 184.9 145 60.0
Thecc.06G086300 Theobroma cacao HOM05D005040 ORTHO05D005984 6.1e-45 184.5 153 56.9
GSVIVG01017116001 Vitis vinifera HOM05D005040 ORTHO05D005984 6.1e-45 184.5 153 56.2
AUR62011626 Chenopodium quinoa HOM05D005040 ORTHO05D005984 8.0e-45 184.1 149 57.7
Gorai.006G098900 Gossypium raimondii HOM05D005040 ORTHO05D005984 1.0e-44 183.7 149 57.7
Gohir.D09G083300 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.4e-44 183.3 153 56.9
MD17G1196000 Malus domestica HOM05D005040 ORTHO05D005984 1.4e-44 183.3 153 54.9
Nn8g39231 Nelumbo nucifera HOM05D005040 ORTHO05D005984 1.8e-44 183.0 145 55.9
Solyc03g120240.3 Solanum lycopersicum HOM05D005040 ORTHO05D005984 1.8e-44 183.0 149 54.4
HPP92_007677 Vanilla planifolia HOM05D005040 ORTHO05D005984 1.8e-44 183.0 153 52.9
Atru.chr1.3264 Acer truncatum HOM05D005040 ORTHO05D005984 2.3e-44 182.6 153 56.2
Sopen03g039120 Solanum pennellii HOM05D005040 ORTHO05D005984 2.3e-44 182.6 149 54.4
PGSC0003DMG400002565 Solanum tuberosum HOM05D005040 ORTHO05D005984 2.3e-44 182.6 149 54.4
Nitab4.5_0008982g0010 Nicotiana tabacum HOM05D005040 ORTHO05D005984 3.0e-44 182.2 149 55.7
Gohir.A05G129132 Gossypium hirsutum HOM05D005040 ORTHO05D005984 6.8e-44 181.0 146 58.2
MD09G1213900 Malus domestica HOM05D005040 ORTHO05D005984 8.8e-44 180.6 153 53.6
Nitab4.5_0010263g0010 Nicotiana tabacum HOM05D005040 ORTHO05D005984 8.8e-44 180.6 153 56.2
Prupe.3G071900 Prunus persica HOM05D005040 ORTHO05D005984 8.8e-44 180.6 153 54.2
Gorai.011G077000 Gossypium raimondii HOM05D005040 ORTHO05D005984 1.2e-43 180.3 153 55.6
Rhsim08G0220800 Rhododendron simsii HOM05D005040 ORTHO05D005984 1.5e-43 179.9 153 54.9
Sc21g0005090 Simmondsia chinensis HOM05D005040 ORTHO05D005984 1.5e-43 179.9 153 52.3
Gohir.D10G071700 Gossypium hirsutum HOM05D005040 ORTHO05D005984 2.0e-43 179.5 153 55.6
Nitab4.5_0000671g0070 Nicotiana tabacum HOM05D005040 ORTHO05D005984 2.0e-43 179.5 153 55.6
PSO063G7160 Papaver somniferum HOM05D005040 ORTHO05D005984 2.0e-43 179.5 153 53.6
TAR626G1436 Trochodendron aralioides HOM05D005040 ORTHO05D005984 2.0e-43 179.5 146 55.5
ClCG09G002180 Citrullus lanatus HOM05D005040 ORTHO05D005984 2.6e-43 179.1 149 55.0
Ciclev10026697m.g Citrus clementina HOM05D005040 ORTHO05D005984 2.6e-43 179.1 153 54.2
HanXRQChr09g0275291 Helianthus annuus HOM05D005040 ORTHO05D005984 2.6e-43 179.1 153 53.6
arahy.Tifrunner.gnm1.ann1.AGNB7P Arachis hypogaea HOM05D005040 ORTHO05D005984 3.4e-43 178.7 156 55.1
MELO3C024227.2 Cucumis melo HOM05D005040 ORTHO05D005984 3.4e-43 178.7 153 54.2
FvH4_6g31060 Fragaria vesca HOM05D005040 ORTHO05D005984 4.4e-43 178.3 149 56.4
FAN09G4279 Fragaria x ananassa HOM05D005040 ORTHO05D005984 4.4e-43 178.3 149 56.4
FAN14G0270 Fragaria x ananassa HOM05D005040 ORTHO05D005984 4.4e-43 178.3 149 56.4
Glyma.08G207000 Glycine max HOM05D005040 ORTHO05D005984 4.4e-43 178.3 153 53.6
Peaxi162Scf00015g00334 Petunia axillaris HOM05D005040 ORTHO05D005984 4.4e-43 178.3 152 53.3
PGSC0003DMG400028614 Solanum tuberosum HOM05D005040 ORTHO05D005984 4.4e-43 178.3 149 55.0
arahy.Tifrunner.gnm1.ann1.MTRR1H Arachis hypogaea HOM05D005040 ORTHO05D005984 5.7e-43 177.9 149 55.7
Lj3g0025298 Lotus japonicus HOM05D005040 ORTHO05D005984 5.7e-43 177.9 153 52.9
PSO782G4813 Papaver somniferum HOM05D005040 ORTHO05D005984 5.7e-43 177.9 153 52.9
Gohir.A10G079800 Gossypium hirsutum HOM05D005040 ORTHO05D005984 7.5e-43 177.6 145 56.6
Manes.04G123000 Manihot esculenta HOM05D005040 ORTHO05D005984 7.5e-43 177.6 153 54.9
TPR.G24183 Trifolium pratense HOM05D005040 ORTHO05D005984 7.5e-43 177.6 153 55.6
Glyma.07G006400 Glycine max HOM05D005040 ORTHO05D005984 9.8e-43 177.2 153 53.6
SGA_v2.0_scaffold4G01995 Striga asiatica HOM05D005040 ORTHO05D005984 9.8e-43 177.2 156 54.5
CsaV3_7G033130 Cucumis sativus L. HOM05D005040 ORTHO05D005984 1.3e-42 176.8 153 52.9
FAN02G3733 Fragaria x ananassa HOM05D005040 ORTHO05D005984 1.3e-42 176.8 149 55.7
Lalb_Chr25g0279631 Lupinus albus HOM05D005040 ORTHO05D005984 1.3e-42 176.8 153 52.3
RcHm_v2.0_Chr2g0137751 Rosa chinensis HOM05D005040 ORTHO05D005984 1.3e-42 176.8 149 54.4
arahy.Tifrunner.gnm1.ann1.PJIU2I Arachis hypogaea HOM05D005040 ORTHO05D005984 1.7e-42 176.4 149 54.4
arahy.Tifrunner.gnm1.ann1.QU6Z4C Arachis hypogaea HOM05D005040 ORTHO05D005984 1.7e-42 176.4 149 54.4
CAN.G438.63 Capsicum annuum HOM05D005040 ORTHO05D005984 1.7e-42 176.4 153 53.6
Dinv38056 Davidia involucrata HOM05D005040 ORTHO05D005984 1.7e-42 176.4 153 54.2
Gorai.009G133000 Gossypium raimondii HOM05D005040 ORTHO05D005984 1.7e-42 176.4 146 56.2
Hund06608 Selenicereus undatus HOM05D005040 ORTHO05D005984 1.7e-42 176.4 145 54.5
TAR624G1120 Trochodendron aralioides HOM05D005040 ORTHO05D005984 2.8e-42 175.6 149 52.3
Manes.11G047900 Manihot esculenta HOM05D005040 ORTHO05D005984 3.7e-42 175.3 153 51.6
PGR102G2548 Punica granatum HOM05D005040 ORTHO05D005984 3.7e-42 175.3 153 56.9
Zm00001eb161080 Zea mays HOM05D005040 ORTHO05D005984 3.7e-42 175.3 153 54.2
Nn2g11793 Nelumbo nucifera HOM05D005040 ORTHO05D005984 4.9e-42 174.9 149 52.3
vmacro18916 Vaccinium macrocarpon HOM05D005040 ORTHO05D005984 4.9e-42 174.9 146 56.2
Duzib235G0181 Durio zibethinus HOM05D005040 ORTHO05D005984 8.3e-42 174.1 145 55.2
Oeu033483.1 Olea europaea HOM05D005040 ORTHO05D005984 8.3e-42 174.1 149 53.7
Os01g0593600 Oryza sativa ssp. japonica HOM05D005040 ORTHO05D005984 8.3e-42 174.1 153 53.6
TWI75G0398 Tripterygium wilfordii HOM05D005040 ORTHO05D005984 8.3e-42 174.1 153 53.6
CSS0024080 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 1.4e-41 173.3 153 52.9
FAN05G0686 Fragaria x ananassa HOM05D005040 ORTHO05D005984 1.4e-41 173.3 149 55.7
Medtr4g011980 Medicago truncatula HOM05D005040 ORTHO05D005984 1.4e-41 173.3 153 52.3
Phvul.010G150900 Phaseolus vulgaris HOM05D005040 ORTHO05D005984 1.4e-41 173.3 153 52.3
Psat7g252720 Pisum sativum HOM05D005040 ORTHO05D005984 1.4e-41 173.3 153 52.3
Sopen12g022320 Solanum pennellii HOM05D005040 ORTHO05D005984 1.8e-41 172.9 153 54.2
Oeu025385.1 Olea europaea HOM05D005040 ORTHO05D005984 2.4e-41 172.6 149 53.0
HanXRQChr16g0501001 Helianthus annuus HOM05D005040 ORTHO05D005984 3.1e-41 172.2 149 52.3
TWI18G1133 Tripterygium wilfordii HOM05D005040 ORTHO05D005984 3.1e-41 172.2 153 52.9
Lj3g0009600 Lotus japonicus HOM05D005040 ORTHO05D005984 4.1e-41 171.8 149 51.7
Hund00613 Selenicereus undatus HOM05D005040 ORTHO05D005984 5.4e-41 171.4 149 52.3
SGA_v2.0_scaffold37G14817 Striga asiatica HOM05D005040 ORTHO05D005984 5.4e-41 171.4 149 53.0
CSS0018986 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 7.0e-41 171.0 149 53.7
CiPaw.01G239800 Carya illinoinensis HOM05D005040 ORTHO05D005984 7.0e-41 171.0 149 50.3
Migut.I00862 Erythranthe guttata HOM05D005040 ORTHO05D005984 9.2e-41 170.6 149 54.4
Rhsim12G0197400 Rhododendron simsii HOM05D005040 ORTHO05D005984 9.2e-41 170.6 159 50.9
Sabra03G0031500 Salix brachista HOM05D005040 ORTHO05D005984 9.2e-41 170.6 152 54.6
unitig_8.g3893 Utricularia gibba HOM05D005040 ORTHO05D005984 9.2e-41 170.6 149 51.7
VMungo0331G0128 Vigna mungo HOM05D005040 ORTHO05D005984 9.2e-41 170.6 149 51.7
CANSAT56G1939 Cannabis sativa HOM05D005040 ORTHO05D005984 1.2e-40 170.2 153 49.7
Gohir.D05G128900 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.2e-40 170.2 146 55.5
CSS0035607 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 1.6e-40 169.9 149 52.3
Lalb_Chr04g0262641 Lupinus albus HOM05D005040 ORTHO05D005984 1.6e-40 169.9 153 51.0
CiPaw.02G151500 Carya illinoinensis HOM05D005040 ORTHO05D005984 2.0e-40 169.5 149 51.7
EL10Ac9g21995 Beta vulgaris HOM05D005040 ORTHO05D005984 3.5e-40 168.7 149 54.4
Sed0010677 Sechium edule HOM05D005040 ORTHO05D005984 3.5e-40 168.7 153 51.0
Potri.003G056100 Populus trichocarpa HOM05D005040 ORTHO05D005984 7.7e-40 167.5 146 54.8
vmacro16949 Vaccinium macrocarpon HOM05D005040 ORTHO05D005984 7.7e-40 167.5 149 51.0
DCAR_007558 Daucus carota HOM05D005040 ORTHO05D005984 1.0e-39 167.2 149 53.7
CARHR074500 Cardamine hirsuta HOM05D005040 ORTHO05D005984 2.9e-39 165.6 145 51.0
AT1G79985 Arabidopsis thaliana HOM05D005040 ORTHO05D005984 8.6e-39 164.1 145 51.0
Carub.0002s2753 Capsella rubella HOM05D005040 ORTHO05D005984 1.1e-38 163.7 153 49.0
BraA02t07378Z Brassica rapa HOM05D005040 ORTHO05D005984 1.5e-38 163.3 145 51.7
BcaC03g16009 Brassica carinata HOM05D005040 ORTHO05D005984 2.5e-38 162.5 145 51.7
C02p37640 Brassica napus HOM05D005040 ORTHO05D005984 3.3e-38 162.2 145 51.0
Potri.001G179500 Populus trichocarpa HOM05D005040 ORTHO05D005984 3.3e-38 162.2 153 52.3
Sp5g35760 Schrenkiella parvula HOM05D005040 ORTHO05D005984 3.3e-38 162.2 145 49.0
Aa31LG4G290 Aethionema arabicum HOM05D001315 ORTHO05D001618 7.3e-38 161.0 145 49.0
A07p26430 Brassica napus HOM05D001315 ORTHO05D001618 7.3e-38 161.0 145 51.0
C06p28820 Brassica napus HOM05D001315 ORTHO05D001618 7.3e-38 161.0 145 51.0
BraA07t30287Z Brassica rapa HOM05D001315 ORTHO05D001618 7.3e-38 161.0 145 51.0
Lj5C61G9 Lonicera japonica HOM05D001315 ORTHO05D005984 7.3e-38 161.0 145 51.0
AL2G41560 Arabidopsis lyrata HOM05D005040 ORTHO05D005984 9.5e-38 160.6 145 49.7
Thhalv10019282m.g Eutrema salsugineum HOM05D005040 ORTHO05D005984 9.5e-38 160.6 145 50.3
FAN14G2190 Fragaria x ananassa HOM05D005040 ORTHO05D005984 1.6e-37 159.8 155 51.0
THA.LOC104813561 Tarenaya hassleriana HOM05D005040 ORTHO05D005984 1.6e-37 159.8 153 52.3
BolC2t09779H Brassica oleracea HOM05D005040 ORTHO05D005984 2.1e-37 159.5 145 51.0
THA.LOC104821737 Tarenaya hassleriana HOM05D005040 ORTHO05D005984 2.8e-37 159.1 144 53.5
QL05p024322 Quercus lobata HOM05D005040 ORTHO05D005984 4.7e-37 158.3 149 50.3
FvH4_6g49470 Fragaria vesca HOM05D005040 ORTHO05D005984 1.0e-36 157.1 155 49.7
Nitab4.5_0002438g0060 Nicotiana tabacum HOM05D005040 ORTHO05D005984 1.0e-36 157.1 149 51.0
Sabra01G0147300 Salix brachista HOM05D005040 ORTHO05D005984 1.0e-36 157.1 149 53.0
Duzib192G0809 Durio zibethinus HOM05D005040 ORTHO05D005984 1.7e-34 149.8 145 50.3
A02p23850 Brassica napus HOM05D005040 ORTHO05D005984 3.7e-34 148.7 163 44.8
Gorai.002G059200 Gossypium raimondii HOM05D005040 ORTHO05D005984 2.0e-32 142.9 140 50.0
BcaB05g25300 Brassica carinata HOM05D005040 ORTHO05D005984 1.3e-31 140.2 145 46.2
Gohir.A02G121600 Gossypium hirsutum HOM05D005040 ORTHO05D005984 4.3e-30 135.2 153 45.8
Cre10.g423950 Chlamydomonas reinhardtii HOM05D005040 ORTHO05D005984 2.1e-29 132.9 149 43.6
ECA232G2706 Erigeron canadensis HOM05D005040 ORTHO05D005984 8.9e-28 127.5 119 52.1
Actinidia24761 Actinidia chinensis HOM05D005040 ORTHO05D005984 5.8e-27 124.8 118 50.8
Lsat_1_v5_gn_4_103600 Lactuca sativa HOM05D005040 ORTHO05D005984 1.3e-26 123.6 114 48.2
PRCOL_00001887 Prasinoderma coloniale HOM05D005040 ORTHO05D005984 2.9e-26 122.5 144 46.5
CDE02G1346 Ceratophyllum demersum HOM05D005040 ORTHO05D005984 4.9e-26 121.7 111 52.3
BcaC08g45282 Brassica carinata HOM05D005040 ORTHO05D005984 6.4e-26 121.3 134 46.3
unitig_22.g5468 Utricularia gibba HOM05D005040 ORTHO05D005984 1.2e-24 117.1 177 41.2
CDE04G1379 Ceratophyllum demersum HOM05D005040 ORTHO05D005984 6.0e-24 114.8 111 49.5
Actinidia01801 Actinidia chinensis HOM05D005040 ORTHO05D005984 6.2e-21 104.8 91 50.5
Gohir.D03G064100 Gossypium hirsutum HOM05D005040 ORTHO05D005984 7.5e-19 97.8 100 49.0
MBI01_g34903_MAGBIO Magnolia biondii HOM05D005040 ORTHO05D005984 2.4e-17 92.8 75 53.3
SalBow2G3126 Salvia bowleyana HOM05D005040 ORTHO05D005984 4.1e-17 92.0 89 44.9
Actinidia32759 Actinidia chinensis HOM05D005040 ORTHO05D005984 9.2e-17 90.9 87 55.2
arahy.Tifrunner.gnm1.ann1.1DTY35 Arachis hypogaea HOM05D005040 ORTHO05D005984 1.2e-16 90.5 119 44.5
Lalb_Chr01g0012631 Lupinus albus HOM05D005040 ORTHO05D005984 6.0e-16 88.2 72 55.6
SalBow2G1342 Salvia bowleyana HOM05D005040 ORTHO05D005984 6.0e-16 88.2 81 50.6
Zm00001eb357580 Zea mays HOM05D005040 ORTHO05D005984 6.0e-16 88.2 72 56.9
DCAR_026311 Daucus carota HOM05D001315 ORTHO05D001618 2.3e-15 86.3 78 52.6
Lalb_Chr01g0012641 Lupinus albus HOM05D005040 ORTHO05D005984 6.6e-15 84.7 75 49.3
Gohir.D02G105550 Gossypium hirsutum HOM05D005040 ORTHO05D005984 8.1e-13 77.8 60 60.0
Gorai.005G119900 Gossypium raimondii HOM05D005040 ORTHO05D005984 8.1e-13 77.8 60 60.0


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