Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 2.0e-74 282.3 139 100.0
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 7.1e-32 141.0 125 56.8
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 7.1e-32 141.0 125 56.8
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 9.2e-32 140.6 132 54.5
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 1.2e-31 140.2 127 55.1
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.2e-31 140.2 129 54.3
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 1.2e-31 140.2 128 51.6
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 1.2e-31 140.2 134 51.5
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.6e-31 139.8 128 50.8
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 2.1e-31 139.4 124 55.6
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 2.7e-31 139.0 133 51.1
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 2.7e-31 139.0 130 52.3
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 2.7e-31 139.0 134 51.5
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 4.6e-31 138.3 122 55.7
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 6.0e-31 137.9 129 50.4
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 7.8e-31 137.5 147 48.3
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 7.8e-31 137.5 122 56.6
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.0e-30 137.1 132 51.5
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.0e-30 137.1 123 56.1
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 1.3e-30 136.7 133 50.4
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 1.3e-30 136.7 122 55.7
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 1.3e-30 136.7 126 53.2
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 1.7e-30 136.3 131 52.7
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.7e-30 136.3 125 53.6
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 2.3e-30 136.0 115 57.4
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 2.3e-30 136.0 129 52.7
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 2.3e-30 136.0 121 53.7
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 2.3e-30 136.0 129 51.2
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.3e-30 136.0 129 51.2
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 3.0e-30 135.6 129 51.2
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 3.0e-30 135.6 122 54.1
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 3.0e-30 135.6 129 51.2
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 3.0e-30 135.6 145 47.6
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 3.9e-30 135.2 122 54.1
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 3.9e-30 135.2 121 52.1
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 3.9e-30 135.2 120 55.0
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 5.1e-30 134.8 124 53.2
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 6.6e-30 134.4 124 52.4
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 6.6e-30 134.4 126 52.4
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 8.6e-30 134.0 125 51.2
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 8.6e-30 134.0 123 53.7
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 8.6e-30 134.0 126 52.4
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 8.6e-30 134.0 122 55.7
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 8.6e-30 134.0 122 52.5
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 8.6e-30 134.0 122 53.3
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 1.1e-29 133.7 128 50.0
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 1.1e-29 133.7 128 50.0
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.1e-29 133.7 132 50.8
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 1.5e-29 133.3 125 50.4
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 1.5e-29 133.3 122 52.5
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.5e-29 133.3 123 54.5
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 1.9e-29 132.9 125 52.8
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 2.5e-29 132.5 126 52.4
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 2.5e-29 132.5 122 54.1
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 2.5e-29 132.5 152 46.1
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 3.3e-29 132.1 123 53.7
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 3.3e-29 132.1 124 51.6
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 3.3e-29 132.1 136 48.5
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 3.3e-29 132.1 145 46.9
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 3.3e-29 132.1 119 58.0
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 4.3e-29 131.7 125 52.0
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 4.3e-29 131.7 111 57.7
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 4.3e-29 131.7 121 55.4
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 4.3e-29 131.7 122 53.3
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 5.6e-29 131.3 125 52.0
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 5.6e-29 131.3 114 54.4
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 7.3e-29 131.0 126 52.4
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 7.3e-29 131.0 126 51.6
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 7.3e-29 131.0 122 52.5
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 7.3e-29 131.0 123 52.8
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 9.5e-29 130.6 122 52.5
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 9.5e-29 130.6 123 52.0
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 1.2e-28 130.2 126 50.0
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.2e-28 130.2 122 53.3
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 1.2e-28 130.2 128 51.6
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 1.2e-28 130.2 122 52.5
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 1.2e-28 130.2 126 50.8
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 2.1e-28 129.4 121 52.1
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 2.1e-28 129.4 123 52.0
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 2.8e-28 129.0 122 50.8
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 2.8e-28 129.0 128 50.0
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 3.6e-28 128.6 123 49.6
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 3.6e-28 128.6 122 50.8
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 3.6e-28 128.6 132 48.5
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 3.6e-28 128.6 130 48.5
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 4.7e-28 128.3 139 48.2
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 4.7e-28 128.3 129 48.8
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 6.2e-28 127.9 123 53.7
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.1e-27 127.1 125 51.2
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 1.1e-27 127.1 123 53.7
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 1.1e-27 127.1 112 52.7
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 1.4e-27 126.7 121 51.2
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 1.8e-27 126.3 122 49.2
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 2.3e-27 125.9 126 51.6
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 2.3e-27 125.9 125 47.2
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 3.1e-27 125.6 133 50.4
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 3.1e-27 125.6 131 46.6
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 3.1e-27 125.6 113 53.1
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 4.0e-27 125.2 126 49.2
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 8.9e-27 124.0 126 48.4
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 1.5e-26 123.2 123 49.6
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 2.0e-26 122.9 123 49.6
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 3.4e-26 122.1 133 45.1
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 7.6e-26 120.9 123 50.4
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 2.9e-25 119.0 125 49.6
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 8.4e-25 117.5 119 49.6
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.9e-24 116.3 114 50.9
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 5.4e-24 114.8 119 52.1
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 1.2e-23 113.6 150 43.3
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 2.5e-21 105.9 124 45.2
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 9.6e-21 104.0 85 57.6
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 8.1e-20 100.9 116 44.0
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 1.5e-18 96.7 80 56.2
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 2.0e-18 96.3 80 56.2
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 2.6e-18 95.9 116 42.2
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 6.4e-17 91.3 105 43.8
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 1.1e-13 80.5 79 50.6
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 7.3e-13 77.8 87 49.4
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 3.4e-10 68.9 113 37.2
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 1.3e-09 67.0 120 31.7
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 1.6e-07 60.1 84 40.5
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 3.5e-07 58.9 53 54.7


User provided reference genes

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