Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_24820 Physcomitrium patens HOM05D004345 ORTHO05D005192 0.0e+00 2088.9 1030 100.0
Mapoly0100s0030 Marchantia polymorpha HOM05D004345 ORTHO05D005192 3.1e-92 344.4 927 30.4
AagrBONN_evm.TU.Sc2ySwM_344.4665 Anthoceros agrestis HOM05D004345 ORTHO05D005192 1.5e-83 315.5 635 36.5
SMO203G0127 Selaginella moellendorffii HOM05D004345 ORTHO05D005192 1.4e-71 275.8 822 29.2
SMO297G0008 Selaginella moellendorffii HOM05D004345 ORTHO05D005192 1.7e-66 258.8 609 31.0
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 3.3e-41 174.9 604 28.0
SEGI_03816 Sequoiadendron giganteum HOM05D004345 ORTHO05D005192 3.3e-41 174.9 750 24.4
ATR0691G134 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.4e-36 159.5 694 25.8
TAR383G0351 Trochodendron aralioides HOM05D004345 ORTHO05D005192 9.9e-30 136.7 432 28.7
Hund17623 Selenicereus undatus HOM05D004345 ORTHO05D005192 2.9e-29 135.2 518 26.6
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 8.3e-29 133.7 526 27.8
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 8.3e-29 133.7 604 24.8
Hund25524 Selenicereus undatus HOM05D004345 ORTHO05D005192 1.9e-28 132.5 612 25.3
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 7.8e-27 127.1 515 26.2
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 1.3e-26 126.3 522 26.6
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 1.1e-25 123.2 526 25.5
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 5.6e-25 120.9 526 25.7
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 1.6e-24 119.4 785 24.3
SalBow3G2318 Salvia bowleyana HOM05D004345 ORTHO05D005192 3.6e-24 118.2 606 22.8
Lalb_Chr21g0307461 Lupinus albus HOM05D004345 ORTHO05D005192 4.7e-24 117.9 592 24.2
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 8.1e-24 117.1 608 24.7
ATR0022G053 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.4e-23 115.5 485 26.4
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 2.4e-23 115.5 515 25.4
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 2.4e-23 115.5 668 24.7
Ah.01g012750 Amaranthus hybridus HOM05D004345 ORTHO05D005192 5.2e-23 114.4 624 23.6
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 6.8e-23 114.0 612 23.7
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 8.9e-23 113.6 672 24.0
Medtr3g069120 Medicago truncatula HOM05D004345 ORTHO05D005192 1.2e-22 113.2 514 24.7
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 2.0e-22 112.5 516 26.7
PGR044G2251 Punica granatum HOM05D004345 ORTHO05D005192 2.0e-22 112.5 592 24.3
EL10Ac9g22980 Beta vulgaris HOM05D000200 ORTHO05D001546 2.6e-22 112.1 868 22.0
AUR62032951 Chenopodium quinoa HOM05D004345 ORTHO05D005192 3.4e-22 111.7 611 22.1
DCAR_009432 Daucus carota HOM05D004345 ORTHO05D005192 4.4e-22 111.3 608 25.0
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 4.4e-22 111.3 530 25.7
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 4.4e-22 111.3 605 24.5
Phvul.011G090800 Phaseolus vulgaris HOM05D004345 ORTHO05D005192 9.9e-22 110.2 656 25.2
Zm00001eb399070 Zea mays HOM05D004345 ORTHO05D005192 1.7e-21 109.4 610 24.6
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 2.9e-21 108.6 427 26.7
ATR0446G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 3.8e-21 108.2 349 26.1
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 3.8e-21 108.2 609 25.0
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 4.9e-21 107.8 528 26.3
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 1.1e-20 106.7 603 24.0
HPP92_000827 Vanilla planifolia HOM05D004345 ORTHO05D005192 1.9e-20 105.9 521 25.0
Lsat_1_v5_gn_8_70480 Lactuca sativa HOM05D004345 ORTHO05D005192 3.2e-20 105.1 673 23.2
Nitab4.5_0001903g0100 Nicotiana tabacum HOM05D004345 ORTHO05D005192 3.2e-20 105.1 628 24.2
PSO210G0907 Papaver somniferum HOM05D004345 ORTHO05D005192 7.1e-20 104.0 550 22.7
Lj8C411T10 Lonicera japonica HOM05D004345 ORTHO05D005192 9.2e-20 103.6 616 23.9
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 9.2e-20 103.6 520 25.0
MSTRG.24391 Avicennia marina HOM05D004345 ORTHO05D005192 1.2e-19 103.2 636 24.4
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 1.2e-19 103.2 696 23.1
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 1.6e-19 102.8 493 24.3
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 2.1e-19 102.4 533 24.6
TWI31G0574 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 2.1e-19 102.4 785 23.3
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 2.7e-19 102.1 516 25.4
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 2.7e-19 102.1 516 25.4
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 6.0e-19 100.9 620 26.1
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 1.3e-18 99.8 618 25.4
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 1.7e-18 99.4 528 25.8
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 2.3e-18 99.0 603 23.7
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 3.0e-18 98.6 604 23.8
Nitab4.5_0001423g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 1.1e-17 96.7 620 23.4
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 1.5e-17 96.3 382 24.6
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.9e-17 95.9 529 24.2
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 1.9e-17 95.9 600 24.5
Solyc01g098450.4 Solanum lycopersicum HOM05D004345 ORTHO05D005192 3.3e-17 95.1 544 24.1
ECA234G4090 Erigeron canadensis HOM05D004345 ORTHO05D005192 5.6e-17 94.4 533 23.5
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 7.3e-17 94.0 528 24.2
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 2.8e-16 92.0 621 22.9
Oeu031657.1 Olea europaea HOM05D004345 ORTHO05D005192 3.6e-16 91.7 542 22.3
Sopen01g042020 Solanum pennellii HOM05D004345 ORTHO05D005192 3.6e-16 91.7 544 23.9
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 4.8e-16 91.3 375 23.5
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 6.2e-16 90.9 552 24.5
Peaxi162Scf00434g00066 Petunia axillaris HOM05D004345 ORTHO05D005192 8.1e-16 90.5 375 24.8
Os03g0240400 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 1.1e-15 90.1 724 21.5
Nitab4.5_0008354g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 1.4e-15 89.7 615 23.1
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 5.3e-15 87.8 350 27.1
SHI21683 Sapria himalayana HOM05D004345 ORTHO05D005192 5.3e-15 87.8 611 23.1
HanXRQChr07g0196981 Helianthus annuus HOM05D004345 ORTHO05D005192 9.0e-15 87.0 612 22.2
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 1.2e-14 86.7 614 21.7
PSO384G0273 Papaver somniferum HOM05D004345 ORTHO05D005192 2.0e-14 85.9 457 22.1
Cc07_g15690 Coffea canephora HOM05D004345 ORTHO05D005192 2.6e-14 85.5 616 24.0
CiPaw.12G047000 Carya illinoinensis HOM05D004345 ORTHO05D005192 3.4e-14 85.1 447 23.5
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 5.8e-14 84.3 391 23.8
Migut.N02797 Erythranthe guttata HOM05D004345 ORTHO05D005192 7.6e-14 84.0 621 21.4
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 1.7e-13 82.8 710 22.3
CDE09G0455 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 4.9e-13 81.3 347 24.2
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 1.4e-12 79.7 370 25.4
Os09g0104700 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 1.9e-12 79.3 611 23.1
unitig_744.g24116 Utricularia gibba HOM05D004345 ORTHO05D005192 2.4e-12 79.0 561 23.5
ATR1192G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 4.2e-12 78.2 394 23.9
Aa31LG8G3600 Aethionema arabicum HOM05D004345 ORTHO05D005192 2.1e-11 75.9 420 21.9
Dinv39346 Davidia involucrata HOM05D004345 ORTHO05D005192 4.6e-11 74.7 473 24.5
AL3G31560 Arabidopsis lyrata HOM05D004345 ORTHO05D005192 7.8e-11 73.9 467 24.4
Thhalv10020051m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 6.6e-10 70.9 397 22.2
AT3G18310 Arabidopsis thaliana HOM05D004345 ORTHO05D005192 8.7e-10 70.5 381 23.6
PSO384G0711 Papaver somniferum HOM05D004345 ORTHO05D005192 1.1e-09 70.1 434 21.2
Carub.0003s1810 Capsella rubella HOM05D004345 ORTHO05D005192 2.5e-09 68.9 426 23.2
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 5.6e-09 67.8 441 23.4
CDE12G0342 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 9.6e-09 67.0 450 23.1
ATR0661G406 Amborella trichopoda HOM05D004345 ORTHO05D005192 4.8e-08 64.7 156 30.8
QL07p000983 Quercus lobata HOM05D004345 ORTHO05D005192 2.4e-07 62.4 212 26.4
RcHm_v2.0_Chr6g0264721 Rosa chinensis HOM05D004345 ORTHO05D005192 6.9e-07 60.8 207 25.6
CARHR093680 Cardamine hirsuta HOM05D004345 ORTHO05D005192 3.4e-06 58.5 164 31.7


User provided reference genes

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