Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 1.2e-150 536.6 278 100.0
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 2.4e-47 193.4 207 51.2
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 3.0e-42 176.4 203 47.8
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 1.8e-39 167.2 140 57.1
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 1.6e-38 164.1 130 60.8
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 4.5e-38 162.5 152 55.3
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 5.9e-38 162.2 127 60.6
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 7.7e-38 161.8 152 52.0
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.3e-37 161.0 134 56.0
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 2.9e-37 159.8 135 57.8
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 3.8e-37 159.5 127 60.6
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 3.8e-37 159.5 130 57.7
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 3.8e-37 159.5 126 59.5
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 3.8e-37 159.5 115 67.8
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 5.0e-37 159.1 135 57.8
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 5.0e-37 159.1 130 59.2
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 8.5e-37 158.3 144 54.9
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 1.5e-36 157.5 135 57.8
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 1.5e-36 157.5 133 59.4
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 1.5e-36 157.5 130 58.5
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 1.5e-36 157.5 216 44.4
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.9e-36 157.1 125 58.4
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.9e-36 157.1 125 58.4
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.9e-36 157.1 121 62.0
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.9e-36 157.1 135 55.6
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.9e-36 157.1 135 55.6
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 2.5e-36 156.8 133 59.4
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 2.5e-36 156.8 125 58.4
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 2.5e-36 156.8 126 57.9
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 3.2e-36 156.4 162 51.9
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 4.2e-36 156.0 146 51.4
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 4.2e-36 156.0 217 44.2
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 5.5e-36 155.6 165 49.1
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 9.4e-36 154.8 121 59.5
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.2e-35 154.5 197 42.1
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.6e-35 154.1 116 61.2
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 1.6e-35 154.1 126 57.9
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.6e-35 154.1 121 61.2
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 3.6e-35 152.9 216 44.9
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 4.7e-35 152.5 143 50.3
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 6.1e-35 152.1 169 47.3
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 6.1e-35 152.1 134 56.7
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 6.1e-35 152.1 119 60.5
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 8.0e-35 151.8 119 60.5
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 1.0e-34 151.4 217 43.8
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 1.0e-34 151.4 120 59.2
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 1.8e-34 150.6 237 39.7
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 2.3e-34 150.2 237 39.7
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 2.3e-34 150.2 188 45.7
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 2.3e-34 150.2 127 57.5
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 3.0e-34 149.8 216 40.7
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 5.2e-34 149.1 131 55.0
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 5.2e-34 149.1 126 56.3
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 6.8e-34 148.7 127 55.1
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 6.8e-34 148.7 119 58.0
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 6.8e-34 148.7 214 43.5
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 8.8e-34 148.3 121 58.7
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 8.8e-34 148.3 217 39.6
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 1.2e-33 147.9 153 47.7
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 1.5e-33 147.5 217 43.8
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 2.0e-33 147.1 133 54.1
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 2.6e-33 146.7 171 45.6
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 2.6e-33 146.7 143 53.1
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 2.6e-33 146.7 143 52.4
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 2.6e-33 146.7 143 52.4
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 2.6e-33 146.7 223 40.8
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 2.6e-33 146.7 170 45.9
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 3.4e-33 146.4 133 54.1
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 3.4e-33 146.4 143 52.4
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 3.4e-33 146.4 143 52.4
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 3.4e-33 146.4 134 51.5
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 3.4e-33 146.4 178 43.8
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 3.4e-33 146.4 124 54.8
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 4.4e-33 146.0 192 43.8
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 4.4e-33 146.0 135 53.3
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 5.7e-33 145.6 129 55.0
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 7.5e-33 145.2 138 51.4
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 7.5e-33 145.2 211 40.3
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.7e-32 144.1 197 42.6
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 2.2e-32 143.7 132 52.3
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 3.7e-32 142.9 126 54.0
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 4.8e-32 142.5 129 55.8
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 6.3e-32 142.1 143 51.7
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 6.3e-32 142.1 119 56.3
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 1.1e-31 141.4 131 53.4
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 1.1e-31 141.4 125 55.2
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 1.8e-31 140.6 131 54.2
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.8e-31 140.6 104 60.6
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 1.8e-31 140.6 146 50.0
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 2.4e-31 140.2 119 56.3
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 3.1e-31 139.8 132 53.8
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 4.1e-31 139.4 206 40.8
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 5.4e-31 139.0 133 52.6
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 7.0e-31 138.7 117 58.1
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 7.0e-31 138.7 148 49.3
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 9.1e-31 138.3 119 56.3
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 1.2e-30 137.9 132 53.0
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 1.6e-30 137.5 132 53.0
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.0e-29 134.8 257 33.5
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 1.7e-29 134.0 206 39.3
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 6.6e-29 132.1 126 53.2
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 6.6e-29 132.1 128 53.9
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 9.5e-28 128.3 133 52.6
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 2.8e-27 126.7 148 47.3
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 8.0e-27 125.2 107 55.1
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 8.0e-27 125.2 121 51.2
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 1.0e-26 124.8 237 35.4
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 1.8e-26 124.0 85 62.4
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 5.2e-26 122.5 133 51.9
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 2.6e-25 120.2 143 42.0
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 3.4e-25 119.8 156 40.4
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 4.9e-24 115.9 87 62.1
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 1.1e-23 114.8 144 44.4
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 4.5e-22 109.4 129 45.7
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 4.3e-20 102.8 90 54.4
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 7.3e-20 102.1 122 47.5
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.6e-19 100.9 153 39.2
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 5.2e-18 95.9 84 54.8
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 6.4e-16 89.0 152 38.2
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 4.9e-08 62.8 63 47.6
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 5.4e-07 59.3 198 27.8


User provided reference genes

Program Settings