Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_21840 Physcomitrium patens HOM05D016889 ORTHO05D009012 4.0e-203 711.4 426 100.0
Pp3c17_18030 Physcomitrium patens HOM05D016889 ORTHO05D026570 1.9e-112 410.2 421 64.4
SMO147G0006 Selaginella moellendorffii HOM05D016889 ORTHO05D026570 1.2e-16 92.0 338 26.9
SEGI_03776 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 4.1e-14 83.6 351 26.8
ATR0829G079 Amborella trichopoda HOM05D016889 ORTHO05D026570 3.6e-10 70.5 281 24.6
SEGI_34495 Sequoiadendron giganteum HOM05D007382 ORTHO05D009012 5.2e-09 66.6 101 41.6
CBR_g41746 Chara braunii HOM05D007382 ORTHO05D009012 6.8e-09 66.2 91 40.7
Cc06_g15490 Coffea canephora HOM05D007382 ORTHO05D009012 3.4e-08 63.9 78 44.9
CARHR168440 Cardamine hirsuta HOM05D007382 ORTHO05D009012 4.4e-08 63.5 66 47.0
Ca_08808_v3 Cicer arietinum L. HOM05D007382 ORTHO05D009012 9.8e-08 62.4 55 52.7
Os01g0835600 Oryza sativa ssp. japonica HOM05D007382 ORTHO05D009012 1.7e-07 61.6 99 33.3
Phvul.001G173000 Phaseolus vulgaris HOM05D007382 ORTHO05D009012 1.7e-07 61.6 70 45.7
Gohir.D04G117000 Gossypium hirsutum HOM05D007382 ORTHO05D009012 2.2e-07 61.2 93 40.9
Gorai.009G421900 Gossypium raimondii HOM05D007382 ORTHO05D009012 2.2e-07 61.2 93 40.9
Psat7g058560 Pisum sativum HOM05D007382 ORTHO05D009012 2.2e-07 61.2 55 50.9
PSO384G2862 Papaver somniferum HOM05D007382 ORTHO05D009012 3.7e-07 60.5 152 36.2
AL5G39780 Arabidopsis lyrata HOM05D007382 ORTHO05D009012 4.9e-07 60.1 56 51.8
Carub.0005s2494 Capsella rubella HOM05D007382 ORTHO05D009012 6.3e-07 59.7 56 51.8
Gohir.A04G077800 Gossypium hirsutum HOM05D007382 ORTHO05D009012 1.1e-06 58.9 93 39.8
SEGI_22784 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 1.1e-06 58.9 472 28.0
TPR.G21464 Trifolium pratense HOM05D007382 ORTHO05D009012 1.1e-06 58.9 98 40.8
TAR633G0943 Trochodendron aralioides HOM05D007382 ORTHO05D009012 1.1e-06 58.9 350 24.9
VMungo1383G3160 Vigna mungo HOM05D007382 ORTHO05D009012 1.1e-06 58.9 66 45.5
Potri.006G216000 Populus trichocarpa HOM05D007382 ORTHO05D009012 1.4e-06 58.5 54 51.9
Sabra06G0166500 Salix brachista HOM05D007382 ORTHO05D009012 1.4e-06 58.5 54 51.9
Hund10951 Selenicereus undatus HOM05D007382 ORTHO05D009012 1.4e-06 58.5 55 54.5
Aa31LG10G12820 Aethionema arabicum HOM05D007382 ORTHO05D009012 1.8e-06 58.2 80 38.8
AT3G58090 Arabidopsis thaliana HOM05D000180 ORTHO05D000099 1.8e-06 58.2 56 50.0
AUR62042292 Chenopodium quinoa HOM05D002855 ORTHO05D009012 1.8e-06 58.2 55 54.5
Medtr7g100200 Medicago truncatula HOM05D007382 ORTHO05D009012 1.8e-06 58.2 76 44.7
CSS0017861 Camellia sinensis var. sinensis HOM05D007382 ORTHO05D009012 2.4e-06 57.8 56 51.8
Hma1.2p1_0111F.1_g053480 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 2.4e-06 57.8 113 38.1
GSVIVG01025574001 Vitis vinifera HOM05D002855 ORTHO05D009676 2.4e-06 57.8 113 38.1
Migut.J00393 Erythranthe guttata HOM05D007382 ORTHO05D009012 3.1e-06 57.4 164 28.7
Hma1.2p1_0111F.1_g053520 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 3.1e-06 57.4 113 38.1
Medtr7g100230 Medicago truncatula HOM05D007382 ORTHO05D009012 3.1e-06 57.4 88 40.9
Nitab4.5_0007103g0020 Nicotiana tabacum HOM05D007382 ORTHO05D009012 3.1e-06 57.4 63 49.2
PGSC0003DMG400038088 Solanum tuberosum HOM05D007382 ORTHO05D009012 3.1e-06 57.4 69 43.5
Duzib093G1372 Durio zibethinus HOM05D007382 ORTHO05D009012 4.1e-06 57.0 67 44.8
MBI04_g28758_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 4.1e-06 57.0 143 30.8
MBI04_g38440_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 4.1e-06 57.0 143 30.8
MD12G1130200 Malus domestica HOM05D007382 ORTHO05D009012 4.1e-06 57.0 96 38.5
Glyma.19G176400 Glycine max HOM05D007382 ORTHO05D009012 5.4e-06 56.6 123 35.8
HanXRQChr07g0195861 Helianthus annuus HOM05D007382 ORTHO05D009012 5.4e-06 56.6 49 53.1
Nitab4.5_0000202g0370 Nicotiana tabacum HOM05D007382 ORTHO05D009012 5.4e-06 56.6 55 52.7
SGA_v2.0_scaffold126G33863 Striga asiatica HOM05D007382 ORTHO05D009012 5.4e-06 56.6 56 50.0
VMungo1080G1211 Vigna mungo HOM05D007382 ORTHO05D009012 5.4e-06 56.6 66 43.9
ATR0709G053 Amborella trichopoda HOM05D007382 ORTHO05D009012 7.0e-06 56.2 55 50.9
CANSAT80G2903 Cannabis sativa HOM05D007382 ORTHO05D009012 7.0e-06 56.2 114 36.0
CiPaw.10G139200 Carya illinoinensis HOM05D007382 ORTHO05D009012 7.0e-06 56.2 54 50.0
FAN05G3594 Fragaria x ananassa HOM05D007382 ORTHO05D009012 7.0e-06 56.2 50 56.0
SEGI_37798 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 7.0e-06 56.2 54 50.0
Thecc.05G050100 Theobroma cacao HOM05D007382 ORTHO05D009012 7.0e-06 56.2 89 40.4
Dinv37282 Davidia involucrata HOM05D007382 ORTHO05D009012 9.1e-06 55.8 78 44.9
Lj1g0005181 Lotus japonicus HOM05D007382 ORTHO05D009012 9.1e-06 55.8 91 37.4
Prupe.6G245200 Prunus persica HOM05D007382 ORTHO05D009012 9.1e-06 55.8 106 38.7
TWI77G0838 Tripterygium wilfordii HOM05D007382 ORTHO05D009012 9.1e-06 55.8 54 51.9


User provided reference genes

Program Settings