Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 6.0e-254 880.6 513 100.0
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 2.3e-64 250.8 369 47.4
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 7.5e-63 245.7 310 50.3
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 2.4e-61 240.7 347 46.7
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 9.2e-61 238.8 299 51.5
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 1.6e-60 238.0 310 56.1
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 4.6e-60 236.5 299 51.2
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 4.6e-60 236.5 299 56.2
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 7.8e-60 235.7 315 50.8
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 7.8e-60 235.7 299 52.5
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 1.0e-59 235.3 315 48.9
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.0e-59 235.3 299 51.2
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.0e-59 235.3 299 51.2
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.3e-59 235.0 310 48.7
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 1.3e-59 235.0 299 50.8
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 3.0e-59 233.8 299 49.8
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 3.9e-59 233.4 347 45.5
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 3.9e-59 233.4 299 50.8
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 3.9e-59 233.4 356 49.7
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 5.0e-59 233.0 357 46.5
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 5.0e-59 233.0 296 55.1
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 6.6e-59 232.6 310 51.6
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.1e-58 231.9 300 51.7
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.9e-58 231.1 300 56.0
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.5e-58 230.7 310 47.7
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.6e-58 229.6 310 47.4
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 5.6e-58 229.6 327 48.6
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 5.6e-58 229.6 299 53.8
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 7.3e-58 229.2 313 50.5
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 7.3e-58 229.2 307 51.8
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 7.3e-58 229.2 301 52.8
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.2e-57 228.4 301 52.8
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.2e-57 228.4 300 53.0
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.6e-57 228.0 341 48.7
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.6e-57 228.0 310 51.0
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 6.2e-57 226.1 310 52.6
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 8.0e-57 225.7 335 48.7
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 1.4e-56 224.9 313 52.4
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.4e-56 224.9 301 51.5
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 1.8e-56 224.6 322 51.2
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 2.3e-56 224.2 314 54.8
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 2.3e-56 224.2 346 47.4
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 3.1e-56 223.8 310 47.7
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 4.0e-56 223.4 375 43.5
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 5.2e-56 223.0 299 52.8
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 8.9e-56 222.2 309 54.0
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 2.0e-55 221.1 312 50.6
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 3.4e-55 220.3 300 51.3
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 5.8e-55 219.5 350 48.0
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 7.5e-55 219.2 299 47.5
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 6.4e-54 216.1 325 47.1
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 8.3e-54 215.7 318 50.6
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 8.3e-54 215.7 329 50.5
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.1e-53 215.3 301 45.8
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 1.9e-53 214.5 333 51.7
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 4.1e-53 213.4 353 43.9
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 5.4e-53 213.0 299 53.2
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 5.4e-53 213.0 319 47.3
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 7.0e-53 212.6 334 47.0
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 9.2e-53 212.2 313 54.0
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 9.2e-53 212.2 312 52.6
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 3.5e-52 210.3 329 48.6
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 4.6e-52 209.9 437 43.0
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 2.3e-51 207.6 356 43.0
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 3.9e-51 206.8 351 43.9
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 6.6e-51 206.1 299 51.8
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 2.8e-49 200.7 300 46.7
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 1.1e-48 198.7 310 50.0
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 1.4e-48 198.4 374 44.9
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 8.9e-48 195.7 299 47.8
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 3.4e-47 193.7 302 47.4
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 1.3e-46 191.8 371 40.4
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.7e-46 191.4 371 42.6
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 2.9e-46 190.7 278 44.6
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 2.4e-45 187.6 299 45.8
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 7.1e-45 186.0 346 44.8
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 9.2e-45 185.7 312 47.1
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 4.6e-44 183.3 355 45.9
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.3e-43 181.8 400 40.2
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 6.6e-43 179.5 281 49.8
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 8.6e-43 179.1 313 44.1
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 8.6e-43 179.1 173 58.4
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 2.5e-42 177.6 360 37.8
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 4.3e-42 176.8 299 44.5
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.2e-41 175.3 303 42.6
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 1.6e-41 174.9 357 38.4
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 4.7e-41 173.3 299 45.5
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 8.1e-41 172.6 377 40.3
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 6.4e-38 162.9 355 42.3
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 7.1e-37 159.5 317 41.3
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 3.5e-36 157.1 243 56.0
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 6.0e-36 156.4 356 35.7
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 6.6e-35 152.9 241 49.4
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 4.3e-34 150.2 113 69.9
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.6e-33 148.3 313 42.8
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 3.6e-33 147.1 304 37.8
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 3.4e-31 140.6 300 44.3
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 2.4e-29 134.4 248 47.2
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 6.0e-28 129.8 338 40.2
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.3e-27 127.9 294 39.1
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 3.9e-27 127.1 285 38.9
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 3.6e-25 120.6 104 65.4
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 3.4e-23 114.0 313 34.5
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 7.1e-21 106.3 287 34.5
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 2.1e-20 104.8 306 32.7
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 5.6e-18 96.7 295 36.9
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 4.8e-17 93.6 175 41.7
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 2.6e-15 87.8 324 31.5
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 3.4e-15 87.4 120 42.5
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 1.4e-13 82.0 63 65.1
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.9e-13 81.6 198 37.4
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 9.3e-13 79.3 68 61.8


User provided reference genes

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