Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_17630 Physcomitrium patens HOM05D003558 ORTHO05D004392 7.2e-150 533.9 268 100.0
Pp3c17_21360 Physcomitrium patens HOM05D003558 ORTHO05D004392 1.8e-137 492.7 268 91.8
Mapoly0071s0017 Marchantia polymorpha HOM05D003558 ORTHO05D004392 1.4e-121 439.9 268 81.7
Prupe.5G124300 Prunus persica HOM05D003558 ORTHO05D004392 9.8e-115 417.2 268 77.2
ATR0602G090 Amborella trichopoda HOM05D003558 ORTHO05D004392 1.3e-114 416.8 268 77.6
MD06G1111600 Malus domestica HOM05D003558 ORTHO05D004392 2.9e-114 415.6 268 77.2
MD14G1132800 Malus domestica HOM05D003558 ORTHO05D004392 4.1e-113 411.8 268 76.5
SEGI_23551 Sequoiadendron giganteum HOM05D003558 ORTHO05D004392 1.6e-112 409.8 268 76.1
Zm00001eb121180 Zea mays HOM05D003558 ORTHO05D004392 2.1e-112 409.5 268 74.6
AUR62019874 Chenopodium quinoa HOM05D003558 ORTHO05D004392 6.0e-112 407.9 268 77.2
Os07g0435100 Oryza sativa ssp. japonica HOM05D003558 ORTHO05D004392 7.8e-112 407.5 268 73.1
Zm00001eb413880 Zea mays HOM05D003558 ORTHO05D004392 7.8e-112 407.5 268 74.6
arahy.Tifrunner.gnm1.ann1.HE7D3F Arachis hypogaea HOM05D003558 ORTHO05D004392 1.7e-111 406.4 268 75.0
arahy.Tifrunner.gnm1.ann1.R1RJVJ Arachis hypogaea HOM05D003558 ORTHO05D004392 1.7e-111 406.4 268 75.0
CSS0001609 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 6.6e-111 404.4 268 75.0
CSS0022214 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 8.6e-111 404.1 268 75.4
AUR62007010 Chenopodium quinoa HOM05D003558 ORTHO05D004392 1.5e-110 403.3 268 76.1
CSS0024989 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.9e-110 402.9 268 74.6
TAR425G0004 Trochodendron aralioides HOM05D003558 ORTHO05D004392 1.2e-109 400.2 268 73.9
Lj8A204G66 Lonicera japonica HOM05D003558 ORTHO05D004392 1.6e-109 399.8 268 74.3
CSS0014298 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.1e-109 399.4 268 73.9
vmacro21480 Vaccinium macrocarpon HOM05D003558 ORTHO05D004392 2.1e-109 399.4 268 73.1
Dinv37501 Davidia involucrata HOM05D003558 ORTHO05D004392 2.8e-109 399.1 268 73.1
Cc08_g16370 Coffea canephora HOM05D003558 ORTHO05D004392 4.7e-109 398.3 268 73.5
Lalb_Chr12g0208821 Lupinus albus HOM05D003558 ORTHO05D004392 6.2e-109 397.9 268 73.9
TAR374G0657 Trochodendron aralioides HOM05D003558 ORTHO05D004392 6.2e-109 397.9 268 73.9
FvH4_5g11650 Fragaria vesca HOM05D003558 ORTHO05D004392 1.1e-108 397.1 268 74.3
FAN18G4304 Fragaria x ananassa HOM05D003558 ORTHO05D004392 1.1e-108 397.1 268 74.3
Psat6g019440 Pisum sativum HOM05D003558 ORTHO05D004392 1.1e-108 397.1 268 73.5
RcHm_v2.0_Chr7g0186141 Rosa chinensis HOM05D003558 ORTHO05D004392 1.4e-108 396.7 268 73.9
HPP92_006339 Vanilla planifolia HOM05D003558 ORTHO05D004392 1.8e-108 396.4 268 73.9
FAN13G2808 Fragaria x ananassa HOM05D003558 ORTHO05D004392 2.3e-108 396.0 268 73.9
PSO170G3792 Papaver somniferum HOM05D003558 ORTHO05D004392 2.3e-108 396.0 268 73.1
TPR.G13178 Trifolium pratense HOM05D003558 ORTHO05D004392 2.3e-108 396.0 268 73.5
FAN04G1402 Fragaria x ananassa HOM05D003558 ORTHO05D004392 3.1e-108 395.6 268 73.9
FAN08G1805 Fragaria x ananassa HOM05D003558 ORTHO05D004392 3.1e-108 395.6 268 73.9
FAN18G4084 Fragaria x ananassa HOM05D003558 ORTHO05D004392 3.1e-108 395.6 266 74.1
PSO017G6909 Papaver somniferum HOM05D003558 ORTHO05D004392 3.1e-108 395.6 268 73.1
Glyma.05G127300 Glycine max HOM05D003558 ORTHO05D004392 4.0e-108 395.2 268 73.5
SGA_v2.0_scaffold111G31394 Striga asiatica HOM05D003558 ORTHO05D004392 4.0e-108 395.2 268 72.8
Eucgr.E00889 Eucalyptus grandis HOM05D003558 ORTHO05D004392 5.2e-108 394.8 268 73.9
Glyma.08G082000 Glycine max HOM05D003558 ORTHO05D004392 5.2e-108 394.8 268 73.1
Medtr1g016750 Medicago truncatula HOM05D003558 ORTHO05D004392 5.2e-108 394.8 268 72.8
Psat0s889g0080 Pisum sativum HOM05D003558 ORTHO05D004392 5.2e-108 394.8 268 72.8
Dinv38812 Davidia involucrata HOM05D003558 ORTHO05D004392 6.8e-108 394.4 268 72.8
Phvul.002G197600 Phaseolus vulgaris HOM05D003558 ORTHO05D004392 8.9e-108 394.0 268 73.1
GSVIVG01019594001 Vitis vinifera HOM05D003558 ORTHO05D004392 1.2e-107 393.7 268 73.1
Nn2g12717 Nelumbo nucifera HOM05D003558 ORTHO05D004392 1.5e-107 393.3 268 73.1
Sed0022053 Sechium edule HOM05D003558 ORTHO05D004392 2.0e-107 392.9 268 72.8
Lalb_Chr07g0188951 Lupinus albus HOM05D003558 ORTHO05D004392 2.6e-107 392.5 268 72.4
Psat7g261400 Pisum sativum HOM05D003558 ORTHO05D004392 2.6e-107 392.5 268 72.8
PGR042G0055 Punica granatum HOM05D003558 ORTHO05D004392 2.6e-107 392.5 268 72.8
Lj4g0003124 Lotus japonicus HOM05D003558 ORTHO05D004392 4.4e-107 391.7 268 72.4
TAR375G0349 Trochodendron aralioides HOM05D003558 ORTHO05D004392 4.4e-107 391.7 268 72.8
CiPaw.12G080800 Carya illinoinensis HOM05D003558 ORTHO05D004392 5.8e-107 391.3 272 71.3
MSTRG.1797 Avicennia marina HOM05D003558 ORTHO05D004392 7.5e-107 391.0 268 72.0
EL10Ac5g12950 Beta vulgaris HOM05D003558 ORTHO05D004392 7.5e-107 391.0 268 73.1
Sc01g0010420 Simmondsia chinensis HOM05D003558 ORTHO05D004392 7.5e-107 391.0 268 73.1
VMungo0251G1601 Vigna mungo HOM05D003558 ORTHO05D004392 9.9e-107 390.6 268 72.4
CiPaw.11G117400 Carya illinoinensis HOM05D003558 ORTHO05D004392 1.3e-106 390.2 268 72.8
Gohir.A08G223500 Gossypium hirsutum HOM05D003558 ORTHO05D004392 1.3e-106 390.2 268 71.6
QL02p029625 Quercus lobata HOM05D003558 ORTHO05D004392 1.3e-106 390.2 267 71.5
QL05p030756 Quercus lobata HOM05D003558 ORTHO05D004392 1.3e-106 390.2 267 72.7
SalBow8G5190 Salvia bowleyana HOM05D003558 ORTHO05D004392 1.3e-106 390.2 268 71.6
Hund11374 Selenicereus undatus HOM05D003558 ORTHO05D004392 1.7e-106 389.8 268 72.8
MELO3C016262.2 Cucumis melo HOM05D003558 ORTHO05D004392 2.2e-106 389.4 268 72.8
Thecc.05G207600 Theobroma cacao HOM05D003558 ORTHO05D004392 2.9e-106 389.0 268 71.3
HanXRQChr15g0472881 Helianthus annuus HOM05D003558 ORTHO05D004392 3.7e-106 388.7 268 70.9
Cpa.g.sc79.5 Carica papaya HOM05D003558 ORTHO05D004392 4.9e-106 388.3 264 72.7
Gohir.1Z049372 Gossypium hirsutum HOM05D003558 ORTHO05D004392 6.4e-106 387.9 268 70.9
Gorai.004G260100 Gossypium raimondii HOM05D003558 ORTHO05D004392 6.4e-106 387.9 268 70.9
Nn1g00283 Nelumbo nucifera HOM05D003558 ORTHO05D004392 8.3e-106 387.5 268 71.3
ClCG07G011380 Citrullus lanatus HOM05D003558 ORTHO05D004392 1.1e-105 387.1 268 72.0
Sed0010282 Sechium edule HOM05D003558 ORTHO05D004392 1.1e-105 387.1 268 72.0
TWI81G0268 Tripterygium wilfordii HOM05D003558 ORTHO05D004392 1.1e-105 387.1 268 71.6
CANSAT21G2039 Cannabis sativa HOM05D003558 ORTHO05D004392 1.9e-105 386.3 268 72.0
ECA246G0145 Erigeron canadensis HOM05D003558 ORTHO05D004392 2.4e-105 386.0 268 70.9
Oeu041397.1 Olea europaea HOM05D003558 ORTHO05D004392 2.4e-105 386.0 268 72.0
Oeu055020.1 Olea europaea HOM05D003558 ORTHO05D004392 2.4e-105 386.0 268 72.4
Duzib128G1157 Durio zibethinus HOM05D003558 ORTHO05D004392 3.2e-105 385.6 268 71.6
Lsat_1_v5_gn_3_12881 Lactuca sativa HOM05D003558 ORTHO05D004392 3.2e-105 385.6 268 71.3
Aqoxy2G02732 Aquilegia oxysepala HOM05D003558 ORTHO05D004392 7.1e-105 384.4 268 71.6
Nitab4.5_0002793g0010 Nicotiana tabacum HOM05D003558 ORTHO05D004392 7.1e-105 384.4 268 70.9
Duzib106G0520 Durio zibethinus HOM05D003558 ORTHO05D004392 1.6e-104 383.3 268 70.9
Nitab4.5_0000357g0410 Nicotiana tabacum HOM05D003558 ORTHO05D004392 2.1e-104 382.9 268 71.3
MSTRG.13893 Avicennia marina HOM05D003558 ORTHO05D004392 2.7e-104 382.5 268 70.1
CsaV3_4G006830 Cucumis sativus L. HOM05D003558 ORTHO05D004392 2.7e-104 382.5 268 71.3
Lj3g0002122 Lotus japonicus HOM05D003558 ORTHO05D004392 2.7e-104 382.5 268 71.6
TWI60G0493 Tripterygium wilfordii HOM05D003558 ORTHO05D004392 6.0e-104 381.3 268 70.9
Actinidia22742 Actinidia chinensis HOM05D003558 ORTHO05D004392 1.7e-103 379.8 266 70.7
Nitab4.5_0002367g0050 Nicotiana tabacum HOM05D003558 ORTHO05D004392 2.3e-103 379.4 268 70.1
COL.COLO4_08911 Corchorus olitorius HOM05D003558 ORTHO05D004392 3.0e-103 379.0 290 66.6
AagrBONN_evm.TU.Sc2ySwM_228.783 Anthoceros agrestis HOM05D003558 ORTHO05D004392 3.9e-103 378.6 268 70.9
PGSC0003DMG400012259 Solanum tuberosum HOM05D003558 ORTHO05D004392 6.6e-103 377.9 268 70.1
THA.LOC104817564 Tarenaya hassleriana HOM05D003558 ORTHO05D004392 6.6e-103 377.9 268 70.5
Sopen08g030930 Solanum pennellii HOM05D003558 ORTHO05D004392 8.6e-103 377.5 268 69.8
Carub.0002s0023 Capsella rubella HOM05D003558 ORTHO05D004392 1.5e-102 376.7 268 69.4
HanXRQChr14g0460421 Helianthus annuus HOM05D003558 ORTHO05D004392 1.9e-102 376.3 269 70.3
Aa31LG2G1510 Aethionema arabicum HOM05D003558 ORTHO05D004392 2.5e-102 375.9 268 69.4
Ah.12g052830 Amaranthus hybridus HOM05D003558 ORTHO05D004392 2.5e-102 375.9 268 70.9
Duzib177G1044 Durio zibethinus HOM05D003558 ORTHO05D004392 5.6e-102 374.8 269 70.3
Thhalv10023640m.g Eutrema salsugineum HOM05D003558 ORTHO05D004392 5.6e-102 374.8 268 69.4
Sp7g00080 Schrenkiella parvula HOM05D003558 ORTHO05D004392 5.6e-102 374.8 268 69.8
THA.LOC104809321 Tarenaya hassleriana HOM05D003558 ORTHO05D004392 5.6e-102 374.8 268 70.5
CARHR046430 Cardamine hirsuta HOM05D003558 ORTHO05D004392 7.3e-102 374.4 268 69.4
Migut.A00609 Erythranthe guttata HOM05D003558 ORTHO05D004392 7.3e-102 374.4 268 70.5
Manes.01G045195 Manihot esculenta HOM05D003558 ORTHO05D004392 9.5e-102 374.0 268 71.3
Manes.02G006900 Manihot esculenta HOM05D003558 ORTHO05D004392 9.5e-102 374.0 268 69.4
Potri.003G142700 Populus trichocarpa HOM05D003558 ORTHO05D004392 9.5e-102 374.0 268 69.8
Solyc08g082700.3 Solanum lycopersicum HOM05D003558 ORTHO05D004392 9.5e-102 374.0 268 69.4
Sp2g00230 Schrenkiella parvula HOM05D003558 ORTHO05D004392 1.2e-101 373.6 268 69.4
Atru.chr9.1940 Acer truncatum HOM05D003558 ORTHO05D004392 1.6e-101 373.2 268 70.1
AT1G64520 Arabidopsis thaliana HOM05D003558 ORTHO05D004392 2.1e-101 372.9 268 69.4
AL2G10280 Arabidopsis lyrata HOM05D003558 ORTHO05D004392 2.8e-101 372.5 268 69.4
BolC9t54634H Brassica oleracea HOM05D003558 ORTHO05D004392 8.1e-101 370.9 268 68.7
BraA09t37087Z Brassica rapa HOM05D003558 ORTHO05D004392 8.1e-101 370.9 268 68.7
BcaB07g31496 Brassica carinata HOM05D003558 ORTHO05D004392 1.4e-100 370.2 268 68.7
Ciclev10021697m.g Citrus clementina HOM05D003558 ORTHO05D004392 1.4e-100 370.2 268 69.4
AL7G47120 Arabidopsis lyrata HOM05D003558 ORTHO05D004392 2.4e-100 369.4 268 68.7
BcaC04g22613 Brassica carinata HOM05D003558 ORTHO05D004392 2.4e-100 369.4 268 68.3
A09p14400 Brassica napus HOM05D003558 ORTHO05D004392 2.4e-100 369.4 268 68.3
A09p14640 Brassica napus HOM05D003558 ORTHO05D004392 2.4e-100 369.4 268 68.3
BraA09t37110Z Brassica rapa HOM05D003558 ORTHO05D004392 2.4e-100 369.4 268 68.3
C09p17320 Brassica napus HOM05D003558 ORTHO05D004392 3.1e-100 369.0 268 68.3
C09p17720 Brassica napus HOM05D003558 ORTHO05D004392 3.1e-100 369.0 268 68.3
BolC9t54666H Brassica oleracea HOM05D003558 ORTHO05D004392 3.1e-100 369.0 268 68.3
BcaC04g22576 Brassica carinata HOM05D003558 ORTHO05D004392 5.2e-100 368.2 268 67.9
BcaB07g31471 Brassica carinata HOM05D003558 ORTHO05D004392 2.0e-99 366.3 268 67.9
Potri.001G088200 Populus trichocarpa HOM05D003558 ORTHO05D004392 2.0e-99 366.3 268 69.0
CAN.G567.30 Capsicum annuum HOM05D003558 ORTHO05D004392 3.4e-99 365.5 268 67.9
CSS0013121 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 5.8e-99 364.8 259 70.7
COL.COLO4_23475 Corchorus olitorius HOM05D003558 ORTHO05D004392 1.7e-98 363.2 309 62.1
Sabra03G0103300 Salix brachista HOM05D003558 ORTHO05D004392 4.9e-98 361.7 268 67.9
DCAR_026273 Daucus carota HOM05D003558 ORTHO05D004392 1.6e-96 356.7 318 59.4
Hma1.2p1_0440F.1_g153570 Hydrangea macrophylla HOM05D003558 ORTHO05D004392 2.1e-96 356.3 360 54.7
Sabra01G0064500 Salix brachista HOM05D003558 ORTHO05D004392 7.8e-96 354.4 278 65.5
COL.COLO4_35445 Corchorus olitorius HOM05D003558 ORTHO05D004392 6.2e-93 344.7 268 65.7
CBR_g36847 Chara braunii HOM05D003558 ORTHO05D004392 1.2e-91 340.5 268 64.6
Oeu009980.1 Olea europaea HOM05D003558 ORTHO05D004392 2.6e-91 339.3 234 72.6
SMO196G0279 Selaginella moellendorffii HOM05D003558 ORTHO05D004392 2.7e-88 329.3 265 64.5
Peaxi162Scf00074g00546 Petunia axillaris HOM05D003558 ORTHO05D004392 5.3e-84 315.1 268 61.2
Nitab4.5_0003266g0030 Nicotiana tabacum HOM05D003558 ORTHO05D004392 2.6e-83 312.8 266 62.0
CSS0017714 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.4e-83 312.4 295 58.6
vmacro13883 Vaccinium macrocarpon HOM05D003558 ORTHO05D004392 2.9e-82 309.3 245 64.5
CSS0031875 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.2e-74 283.1 268 57.5
HPP92_027865 Vanilla planifolia HOM05D003558 ORTHO05D004392 2.2e-74 283.1 177 78.5
Ca_18846_v3 Cicer arietinum L. HOM05D003558 ORTHO05D004392 1.5e-70 270.4 189 72.0
AT5G42040 Arabidopsis thaliana HOM05D003558 ORTHO05D004392 7.4e-70 268.1 268 54.5
Ca_13177_v3 Cicer arietinum L. HOM05D003558 ORTHO05D004392 2.8e-69 266.2 184 72.3
Cfa011973 Carpinus fangiana HOM05D003558 ORTHO05D004392 6.2e-69 265.0 184 72.3
Peaxi162Scf00117g00921 Petunia axillaris HOM05D003558 ORTHO05D004392 3.1e-68 262.7 195 69.7
DCAR_006513 Daucus carota HOM05D003558 ORTHO05D004392 4.5e-67 258.8 183 71.0
Cre17.g708300 Chlamydomonas reinhardtii HOM05D003558 ORTHO05D004392 4.9e-66 255.4 265 53.6
PRCOL_00000075 Prasinoderma coloniale HOM05D003558 ORTHO05D004392 1.8e-63 246.9 266 49.2
Eucgr.E00914 Eucalyptus grandis HOM05D003558 ORTHO05D004392 6.3e-61 238.4 178 69.1
MCO10G293 Micromonas commoda HOM05D003558 ORTHO05D004392 1.3e-58 230.7 256 48.8
Eucgr.E00943 Eucalyptus grandis HOM05D003558 ORTHO05D004392 4.6e-56 222.2 194 61.9
RcHm_v2.0_Chr2g0138681 Rosa chinensis HOM05D003558 ORTHO05D004392 2.8e-53 213.0 267 47.6
Eucgr.E00934 Eucalyptus grandis HOM05D003558 ORTHO05D004392 5.9e-51 205.3 178 61.2
FvH4_6g31620 Fragaria vesca HOM05D003558 ORTHO05D004392 2.9e-50 203.0 274 46.7
Haze_09103 Corylus avellana HOM05D003558 ORTHO05D004392 5.5e-49 198.7 122 82.0
Nitab4.5_0007285g0050 Nicotiana tabacum HOM05D003558 ORTHO05D004392 1.2e-48 197.6 217 52.1
Eucgr.E00681 Eucalyptus grandis HOM05D003558 ORTHO05D004392 2.7e-48 196.4 186 60.8
FAN09G0436 Fragaria x ananassa HOM05D003558 ORTHO05D004392 5.7e-46 188.7 274 44.9
Eucgr.E00961 Eucalyptus grandis HOM05D003558 ORTHO05D004392 8.2e-45 184.9 123 74.8
Aqoxy2G02711 Aquilegia oxysepala HOM05D003558 ORTHO05D004392 5.0e-42 175.6 116 72.4
Glyma.03G059800 Glycine max HOM05D000140 ORTHO05D004392 3.2e-41 172.9 108 73.1
CSS0010814 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 4.5e-35 152.5 119 68.9
Actinidia22185 Actinidia chinensis HOM05D003558 ORTHO05D005715 1.8e-31 140.6 129 56.6
Aa31LG9G160 Aethionema arabicum HOM05D003558 ORTHO05D004392 5.0e-18 95.9 88 53.4
CSS0029558 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.6e-16 89.7 60 73.3
CSS0047737 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.0e-15 88.2 59 72.9
Sc07g0010140 Simmondsia chinensis HOM05D003558 ORTHO05D004392 1.0e-15 88.2 60 75.0
Psat6g100040 Pisum sativum HOM05D003558 ORTHO05D004392 7.5e-14 82.0 71 57.7
CSS0000450 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.3e-13 81.3 49 79.6
CSS0011636 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.3e-13 81.3 49 75.5
CSS0044790 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 1.3e-13 81.3 49 75.5
CSS0046828 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.7e-13 79.7 54 70.4
CSS0039205 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 2.4e-12 77.0 49 73.5
Eucgr.E00716 Eucalyptus grandis HOM05D003558 ORTHO05D045319 2.0e-11 73.9 48 68.8
CSS0013431 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 3.5e-11 73.2 49 75.5
CSS0004905 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 4.5e-11 72.8 44 77.3
Eucgr.E00976 Eucalyptus grandis HOM05D003558 ORTHO05D045319 4.5e-11 72.8 49 69.4
Aqoxy2G02712 Aquilegia oxysepala HOM05D003558 ORTHO05D004392 6.6e-10 68.9 61 54.1
Eucgr.E00909 Eucalyptus grandis HOM05D003558 ORTHO05D191499 3.3e-09 66.6 68 45.6
CSS0022413 Camellia sinensis var. sinensis HOM05D003558 ORTHO05D004392 7.3e-09 65.5 38 73.7


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