Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 4.8e-218 761.1 462 100.0
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 2.4e-92 343.6 470 56.6
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 6.2e-16 89.7 136 42.6
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.4e-15 88.6 95 48.4
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 9.0e-15 85.9 95 46.3
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 5.1e-10 70.1 153 33.3
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 1.1e-09 68.9 83 42.2
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 3.3e-09 67.4 67 49.3
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 5.6e-09 66.6 94 36.2
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 9.6e-09 65.9 138 30.4
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 1.3e-08 65.5 78 42.3
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 4.8e-08 63.5 181 29.3
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 6.2e-08 63.2 90 38.9
AagrBONN_evm.TU.Sc2ySwM_368.3264 Anthoceros agrestis HOM05D029403 ORTHO05D006930 6.2e-08 63.2 177 29.9
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 6.2e-08 63.2 63 47.6
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 6.2e-08 63.2 112 31.2
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 8.1e-08 62.8 92 38.0
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 8.1e-08 62.8 92 37.0
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.4e-07 62.0 100 38.0
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 1.4e-07 62.0 100 35.0
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.8e-07 61.6 92 34.8
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 3.1e-07 60.8 100 36.0
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 3.1e-07 60.8 88 39.8
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 3.1e-07 60.8 92 33.7
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 3.1e-07 60.8 91 36.3
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 3.1e-07 60.8 87 36.8
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 4.0e-07 60.5 102 37.3
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 4.0e-07 60.5 73 39.7
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 4.0e-07 60.5 92 35.9
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 5.3e-07 60.1 101 37.6
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 5.3e-07 60.1 101 37.6
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 5.3e-07 60.1 94 35.1
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 5.3e-07 60.1 93 35.5
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 5.3e-07 60.1 69 47.8
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 5.3e-07 60.1 62 46.8
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 5.3e-07 60.1 97 36.1
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 5.3e-07 60.1 89 34.8
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 6.9e-07 59.7 90 34.4
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 9.0e-07 59.3 64 45.3
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 9.0e-07 59.3 95 34.7
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 9.0e-07 59.3 95 34.7
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 9.0e-07 59.3 102 35.3
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.2e-06 58.9 88 37.5
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 1.2e-06 58.9 90 36.7
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 1.2e-06 58.9 90 36.7
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.2e-06 58.9 76 42.1
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 1.5e-06 58.5 106 36.8
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 1.5e-06 58.5 88 36.4
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 1.5e-06 58.5 79 40.5
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 2.0e-06 58.2 87 34.5
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.0e-06 58.2 91 36.3
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 2.0e-06 58.2 99 32.3
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 2.6e-06 57.8 91 37.4
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 2.6e-06 57.8 88 36.4
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.6e-06 57.8 98 35.7
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 2.6e-06 57.8 106 34.0
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.6e-06 57.8 104 37.5
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 2.6e-06 57.8 135 30.4
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 2.6e-06 57.8 96 36.5
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 3.4e-06 57.4 86 38.4
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 3.4e-06 57.4 100 37.0
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 3.4e-06 57.4 53 47.2
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 3.4e-06 57.4 77 40.3
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 4.5e-06 57.0 109 31.2
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 4.5e-06 57.0 193 25.9
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 5.8e-06 56.6 92 34.8
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 5.8e-06 56.6 87 37.9
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 5.8e-06 56.6 88 35.2
Cre06.g310200 Chlamydomonas reinhardtii HOM05D029403 ORTHO05D006930 5.8e-06 56.6 79 31.6
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 5.8e-06 56.6 99 32.3
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 5.8e-06 56.6 84 38.1
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 5.8e-06 56.6 57 42.1
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 5.8e-06 56.6 79 40.5
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 5.8e-06 56.6 80 40.0
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 7.6e-06 56.2 53 49.1
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 7.6e-06 56.2 122 33.6


User provided reference genes

Program Settings