Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.6e-248 862.4 485 100.0
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.6e-248 862.4 485 100.0
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 4.2e-148 528.9 485 62.7
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 6.1e-115 418.7 342 59.1
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 9.8e-113 411.4 327 61.5
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 6.3e-112 408.7 348 56.6
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 6.3e-112 408.7 330 60.6
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 8.3e-112 408.3 349 56.7
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 8.3e-112 408.3 349 56.7
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 8.3e-112 408.3 345 59.4
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 2.4e-111 406.8 343 57.1
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 2.4e-111 406.8 300 64.3
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 4.1e-111 406.0 328 59.5
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 4.1e-111 406.0 330 59.7
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 5.4e-111 405.6 327 59.3
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 7.0e-111 405.2 343 58.6
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 9.1e-111 404.8 328 59.5
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 9.1e-111 404.8 337 58.2
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.0e-110 403.7 301 64.1
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 2.0e-110 403.7 330 58.8
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 2.7e-110 403.3 355 56.9
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 3.5e-110 402.9 328 58.5
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 3.5e-110 402.9 326 59.5
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 4.5e-110 402.5 330 59.1
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.7e-109 400.6 331 58.6
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.9e-109 399.8 328 60.7
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 3.8e-109 399.4 330 58.5
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 3.8e-109 399.4 302 62.3
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 5.0e-109 399.1 312 60.6
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 8.6e-109 398.3 351 56.4
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.5e-108 397.5 346 56.9
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.9e-108 397.1 301 62.8
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 1.9e-108 397.1 309 63.1
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 2.5e-108 396.7 312 60.9
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 2.5e-108 396.7 348 56.0
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 3.3e-108 396.4 329 58.4
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 3.3e-108 396.4 348 56.0
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 4.2e-108 396.0 344 56.4
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 5.5e-108 395.6 330 58.8
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 9.5e-108 394.8 476 46.4
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 9.5e-108 394.8 476 46.2
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.2e-107 394.4 331 58.0
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.2e-107 394.4 301 62.5
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 1.6e-107 394.0 326 57.4
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 2.1e-107 393.7 325 59.4
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 2.1e-107 393.7 299 62.9
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 3.6e-107 392.9 301 61.1
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 3.6e-107 392.9 346 56.6
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.7e-107 392.5 478 46.4
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 4.7e-107 392.5 332 58.1
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 6.1e-107 392.1 332 58.1
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.0e-106 391.3 293 62.5
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 1.4e-106 391.0 301 63.1
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 1.4e-106 391.0 301 62.1
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.8e-106 390.6 476 46.0
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 2.3e-106 390.2 330 57.3
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 3.0e-106 389.8 326 57.7
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 3.0e-106 389.8 294 62.6
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 3.0e-106 389.8 337 56.7
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 4.0e-106 389.4 335 55.8
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 4.0e-106 389.4 349 55.6
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 4.0e-106 389.4 312 60.3
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 6.8e-106 388.7 334 57.5
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.2e-105 387.9 307 60.3
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 1.2e-105 387.9 302 60.6
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 1.2e-105 387.9 301 61.8
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.5e-105 387.5 300 60.3
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.6e-105 386.7 303 60.7
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 2.6e-105 386.7 335 55.5
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 2.6e-105 386.7 296 61.8
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 2.6e-105 386.7 295 61.7
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 3.4e-105 386.3 359 54.6
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 4.4e-105 386.0 356 54.8
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 7.5e-105 385.2 300 60.3
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 2.2e-104 383.6 330 56.4
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 2.8e-104 383.3 335 57.0
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 2.8e-104 383.3 300 60.3
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 4.9e-104 382.5 312 59.9
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.8e-103 380.6 303 59.4
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.8e-103 380.6 302 60.9
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 3.1e-103 379.8 303 59.1
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 2.3e-101 373.6 297 58.6
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 2.9e-101 373.2 325 56.6
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 6.6e-101 372.1 325 56.3
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.1e-100 371.3 325 56.0
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.5e-100 370.9 375 52.8
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 2.5e-100 370.2 324 56.8
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 4.3e-100 369.4 346 53.5
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 9.5e-100 368.2 325 54.5
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 1.6e-99 367.5 325 54.8
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 3.6e-99 366.3 301 57.5
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.5e-97 360.9 273 61.2
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 2.6e-97 360.1 387 47.0
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 4.6e-94 349.4 312 56.1
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 4.3e-92 342.8 331 53.5
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 8.9e-82 308.5 277 54.9
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 5.4e-79 299.3 239 60.7
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.3e-77 293.9 231 60.2
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 2.5e-76 290.4 302 48.3
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 3.3e-76 290.0 317 48.6
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 3.3e-76 290.0 217 62.7
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 1.5e-73 281.2 254 54.7
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 5.8e-73 279.3 228 60.1
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 3.1e-66 256.9 196 61.2
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 1.1e-63 248.4 219 55.3
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.6e-62 244.6 230 53.5
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 2.1e-62 244.2 277 41.5
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 1.0e-61 241.9 200 58.0
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 6.7e-53 212.6 205 52.2
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 6.7e-53 212.6 205 52.2
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 1.8e-45 188.0 119 68.9
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 2.5e-39 167.5 179 50.3
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 1.1e-34 152.1 197 43.1
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 8.2e-27 125.9 119 51.3
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 4.1e-26 123.6 86 61.6
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.7e-22 110.9 65 75.4
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 1.0e-21 109.0 136 43.4
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 2.6e-20 104.4 135 42.2
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 4.8e-19 100.1 122 46.7
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 7.0e-18 96.3 66 60.6
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 1.4e-15 88.6 74 54.1
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 3.3e-12 77.4 50 68.0
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.0e-09 68.2 118 26.3
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 1.1e-07 62.4 38 65.8
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.6e-06 58.5 59 40.7
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 6.1e-06 56.6 72 43.1


User provided reference genes

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