Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 3.0e-245 851.7 512 100.0
Mapoly0028s0047 Marchantia polymorpha HOM05D007444 ORTHO05D009359 3.8e-14 84.0 198 32.3
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 1.2e-12 79.0 115 38.3
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 1.6e-12 78.6 169 30.8
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 1.0e-11 75.9 122 38.5
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 3.0e-11 74.3 121 35.5
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 3.9e-11 73.9 122 32.0
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 5.1e-11 73.6 114 43.0
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 5.1e-11 73.6 142 33.1
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 5.1e-11 73.6 142 33.1
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 8.7e-11 72.8 121 34.7
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 8.7e-11 72.8 112 35.7
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 1.1e-10 72.4 121 34.7
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 1.1e-10 72.4 121 34.7
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 1.1e-10 72.4 121 34.7
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 1.5e-10 72.0 113 37.2
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 1.5e-10 72.0 117 35.9
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.9e-10 71.6 112 34.8
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.9e-10 71.6 112 35.7
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 2.5e-10 71.2 112 34.8
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 3.3e-10 70.9 112 34.8
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 5.6e-10 70.1 114 36.8
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 9.6e-10 69.3 112 36.6
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 1.3e-09 68.9 113 33.6
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 1.3e-09 68.9 110 37.3
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 1.6e-09 68.6 113 35.4
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 1.6e-09 68.6 149 34.2
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 2.1e-09 68.2 116 34.5
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 2.1e-09 68.2 261 25.7
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 2.8e-09 67.8 112 31.2
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 2.8e-09 67.8 113 37.2
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 4.8e-09 67.0 112 35.7
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 8.1e-09 66.2 114 36.8
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.8e-08 65.1 112 32.1
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 2.4e-08 64.7 114 36.8
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 3.1e-08 64.3 116 34.5
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 3.1e-08 64.3 112 33.9
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 6.9e-08 63.2 119 35.3
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 6.9e-08 63.2 116 36.2
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 9.0e-08 62.8 114 35.1
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 1.2e-07 62.4 115 33.9
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 2.0e-07 61.6 289 23.9
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 3.4e-07 60.8 116 33.6
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 4.5e-07 60.5 117 33.3
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 7.6e-07 59.7 116 31.9
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 7.6e-07 59.7 114 32.5
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 9.9e-07 59.3 111 33.3
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 1.3e-06 58.9 115 35.7
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 1.7e-06 58.5 113 32.7
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 2.2e-06 58.2 102 37.3
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 2.9e-06 57.8 115 33.9
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.9e-06 57.8 116 30.2
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 2.9e-06 57.8 116 31.0
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 2.9e-06 57.8 113 31.9
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 2.9e-06 57.8 114 30.7
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 3.8e-06 57.4 113 32.7
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 3.8e-06 57.4 113 30.1
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 4.9e-06 57.0 164 28.0
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 6.4e-06 56.6 117 31.6


User provided reference genes

Program Settings