Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c14_12070 Physcomitrium patens HOM05D005869 ORTHO05D007229 4.9e-182 641.0 314 100.0
Mapoly0153s0008 Marchantia polymorpha HOM05D005869 ORTHO05D007229 1.0e-70 271.2 276 48.6
AagrBONN_evm.TU.Sc2ySwM_368.1764 Anthoceros agrestis HOM05D005869 ORTHO05D007229 5.1e-70 268.9 275 50.2
BcaC06g35333 Brassica carinata HOM05D005869 ORTHO05D007229 5.6e-69 265.4 280 51.1
Potri.001G066000 Populus trichocarpa HOM05D005869 ORTHO05D007229 2.1e-68 263.5 287 49.1
Thecc.02G194400 Theobroma cacao HOM05D005869 ORTHO05D007229 2.1e-68 263.5 285 49.8
Thhalv10008411m.g Eutrema salsugineum HOM05D005869 ORTHO05D007229 3.6e-68 262.7 271 53.5
Nitab4.5_0002899g0010 Nicotiana tabacum HOM05D005869 ORTHO05D007229 3.6e-68 262.7 288 50.7
Sabra01G0045900 Salix brachista HOM05D005869 ORTHO05D007229 3.6e-68 262.7 296 49.3
CARHR027570 Cardamine hirsuta HOM05D005869 ORTHO05D007229 4.7e-68 262.3 269 51.7
RcHm_v2.0_Chr4g0429061 Rosa chinensis HOM05D005869 ORTHO05D007229 6.2e-68 261.9 283 49.5
Potri.003G163800 Populus trichocarpa HOM05D005869 ORTHO05D007229 1.1e-67 261.2 268 52.2
FvH4_4g22830 Fragaria vesca HOM05D005869 ORTHO05D007229 1.4e-67 260.8 277 49.8
THA.LOC104820535 Tarenaya hassleriana HOM05D005869 ORTHO05D007229 1.4e-67 260.8 275 51.3
Sp1g24290 Schrenkiella parvula HOM05D005869 ORTHO05D007229 2.4e-67 260.0 286 49.0
Solyc12g041880.2 Solanum lycopersicum HOM05D005869 ORTHO05D007229 3.1e-67 259.6 280 49.3
Gohir.D02G175000 Gossypium hirsutum HOM05D005869 ORTHO05D007229 4.0e-67 259.2 273 51.3
Gohir.A03G152800 Gossypium hirsutum HOM05D005869 ORTHO05D007229 5.2e-67 258.8 273 50.9
Zm00001eb044420 Zea mays HOM05D005869 ORTHO05D007229 5.2e-67 258.8 290 48.3
A07p11480 Brassica napus HOM05D005869 ORTHO05D007229 6.8e-67 258.5 289 49.5
Sopen12g020650 Solanum pennellii HOM05D005869 ORTHO05D007229 6.8e-67 258.5 280 49.3
Duzib132G0160 Durio zibethinus HOM05D005869 ORTHO05D007229 1.2e-66 257.7 303 49.2
AL1G41620 Arabidopsis lyrata HOM05D005869 ORTHO05D007229 1.5e-66 257.3 271 49.8
C07p17290 Brassica napus HOM05D005869 ORTHO05D007229 2.0e-66 256.9 280 50.4
Carub.0001s2653 Capsella rubella HOM05D005869 ORTHO05D007229 4.4e-66 255.8 288 48.6
Gorai.005G196600 Gossypium raimondii HOM05D005869 ORTHO05D007229 4.4e-66 255.8 273 51.6
BcaB07g32415 Brassica carinata HOM05D005869 ORTHO05D007229 5.8e-66 255.4 291 49.5
PGSC0003DMG400014477 Solanum tuberosum HOM05D005869 ORTHO05D007229 7.6e-66 255.0 284 50.0
GSVIVG01004938001 Vitis vinifera HOM05D005869 ORTHO05D007229 7.6e-66 255.0 283 49.5
CsaV3_4G002340 Cucumis sativus L. HOM05D005869 ORTHO05D007229 2.9e-65 253.1 279 49.1
PSO017G3988 Papaver somniferum HOM05D005869 ORTHO05D007229 2.9e-65 253.1 292 46.6
PSO478G4440 Papaver somniferum HOM05D005869 ORTHO05D007229 3.8e-65 252.7 276 48.6
MELO3C017808.2 Cucumis melo HOM05D005869 ORTHO05D007229 6.4e-65 251.9 281 49.5
Nn4g22166 Nelumbo nucifera HOM05D005869 ORTHO05D007229 6.4e-65 251.9 288 47.6
BraA07t28937Z Brassica rapa HOM05D005869 ORTHO05D007229 8.4e-65 251.5 297 47.1
CDE05G0434 Ceratophyllum demersum HOM05D005869 ORTHO05D007229 8.4e-65 251.5 282 48.9
Cc11_g15130 Coffea canephora HOM05D005869 ORTHO05D007229 8.4e-65 251.5 272 50.0
Prupe.1G217100 Prunus persica HOM05D005869 ORTHO05D007229 1.1e-64 251.1 275 49.5
ClCG07G011870 Citrullus lanatus HOM05D005869 ORTHO05D007229 1.4e-64 250.8 295 48.1
Atru.chr11.2424 Acer truncatum HOM05D005869 ORTHO05D007229 1.9e-64 250.4 270 49.6
Aqoxy5G03171 Aquilegia oxysepala HOM05D005869 ORTHO05D007229 2.4e-64 250.0 287 45.6
BolC7t42232H Brassica oleracea HOM05D005869 ORTHO05D007229 3.2e-64 249.6 288 47.9
Manes.08G102300 Manihot esculenta HOM05D005869 ORTHO05D007229 9.3e-64 248.1 278 49.6
Sed0007329 Sechium edule HOM05D005869 ORTHO05D007229 9.3e-64 248.1 289 47.8
TPR.G35001 Trifolium pratense HOM05D005869 ORTHO05D007229 9.3e-64 248.1 281 47.7
TWI36G0175 Tripterygium wilfordii HOM05D005869 ORTHO05D007229 1.6e-63 247.3 277 46.6
AT1G28100 Arabidopsis thaliana HOM05D005869 ORTHO05D007229 3.5e-63 246.1 271 49.1
BraA09t39308Z Brassica rapa HOM05D005869 ORTHO05D007229 3.5e-63 246.1 297 48.8
Duzib052G0289 Durio zibethinus HOM05D005869 ORTHO05D007229 4.6e-63 245.7 272 48.9
Migut.K01077 Erythranthe guttata HOM05D005869 ORTHO05D007229 4.6e-63 245.7 273 47.6
MD13G1129300 Malus domestica HOM05D005869 ORTHO05D007229 4.6e-63 245.7 279 48.7
CSS0039203 Camellia sinensis var. sinensis HOM05D005869 ORTHO05D007229 6.0e-63 245.4 293 46.1
Ciclev10032244m.g Citrus clementina HOM05D005869 ORTHO05D007229 6.0e-63 245.4 280 48.6
TAR622G0237 Trochodendron aralioides HOM05D005869 ORTHO05D007229 6.0e-63 245.4 281 49.8
ATR0829G022 Amborella trichopoda HOM05D005869 ORTHO05D007229 1.0e-62 244.6 285 45.6
arahy.Tifrunner.gnm1.ann1.WRPQ8T Arachis hypogaea HOM05D005869 ORTHO05D007229 2.3e-62 243.4 271 48.0
vmacro16076 Vaccinium macrocarpon HOM05D005869 ORTHO05D007229 3.0e-62 243.0 321 46.1
Rhsim12G0098100 Rhododendron simsii HOM05D005869 ORTHO05D007229 5.1e-62 242.3 308 44.8
Medtr2g072940 Medicago truncatula HOM05D005869 ORTHO05D007229 6.6e-62 241.9 279 48.4
C05p26800 Brassica napus HOM05D005869 ORTHO05D007229 1.1e-61 241.1 286 47.2
A09p37960 Brassica napus HOM05D005869 ORTHO05D007229 4.3e-61 239.2 278 48.6
Oeu044507.2 Olea europaea HOM05D005869 ORTHO05D007229 4.3e-61 239.2 282 46.1
Peaxi162Scf00128g01773 Petunia axillaris HOM05D005869 ORTHO05D007229 4.3e-61 239.2 272 48.9
Hma1.2p1_1834F.1_g304595 Hydrangea macrophylla HOM05D005869 ORTHO05D007229 9.6e-61 238.0 276 49.3
arahy.Tifrunner.gnm1.ann1.3C70LE Arachis hypogaea HOM05D005869 ORTHO05D007229 1.6e-60 237.3 271 47.6
BolC5t31401H Brassica oleracea HOM05D005869 ORTHO05D007229 2.8e-60 236.5 280 48.9
BcaC05g26814 Brassica carinata HOM05D005869 ORTHO05D007229 3.6e-60 236.1 264 48.9
Psat1g007680 Pisum sativum HOM05D005869 ORTHO05D007229 6.2e-60 235.3 280 45.4
Eucgr.B03550 Eucalyptus grandis HOM05D005869 ORTHO05D007229 1.1e-59 234.6 274 47.4
MD16G1129300 Malus domestica HOM05D005869 ORTHO05D007229 1.4e-59 234.2 279 47.3
HPP92_000723 Vanilla planifolia HOM05D005869 ORTHO05D007229 1.4e-59 234.2 299 44.5
CiPaw.05G102600 Carya illinoinensis HOM05D005869 ORTHO05D007229 1.8e-59 233.8 301 46.2
PGR102G3220 Punica granatum HOM05D005869 ORTHO05D007229 2.4e-59 233.4 281 45.2
Lalb_Chr25g0285611 Lupinus albus HOM05D005869 ORTHO05D007229 5.3e-59 232.3 289 43.9
EL10Ac6g13596 Beta vulgaris HOM05D005869 ORTHO05D007229 6.9e-59 231.9 281 45.9
Actinidia09599 Actinidia chinensis HOM05D005869 ORTHO05D007229 1.2e-58 231.1 292 44.5
HanXRQChr08g0210441 Helianthus annuus HOM05D005869 ORTHO05D007229 5.8e-58 228.8 286 45.1
MSTRG.8047 Avicennia marina HOM05D005869 ORTHO05D007229 3.8e-57 226.1 296 45.3
Glyma.13G264200 Glycine max HOM05D005869 ORTHO05D007229 3.8e-57 226.1 278 45.3
Manes.09G187100 Manihot esculenta HOM05D005869 ORTHO05D007229 4.9e-57 225.7 207 55.1
Lj3g0004461 Lotus japonicus HOM05D005869 ORTHO05D007229 6.4e-57 225.3 282 43.3
Ah.03g135600 Amaranthus hybridus HOM05D005869 ORTHO05D007229 1.4e-56 224.2 281 46.6
Phvul.005G075700 Phaseolus vulgaris HOM05D005869 ORTHO05D007229 3.2e-56 223.0 280 44.6
HanXRQChr12g0363371 Helianthus annuus HOM05D005869 ORTHO05D007229 4.2e-56 222.6 280 44.6
ECA233G2015 Erigeron canadensis HOM05D005869 ORTHO05D007229 7.1e-56 221.9 273 45.4
Pp3c14_11090 Physcomitrium patens HOM05D005869 ORTHO05D007229 6.6e-54 215.3 134 83.6
Cre03.g194450 Chlamydomonas reinhardtii HOM05D005869 ORTHO05D007229 1.1e-51 208.0 280 42.9
VMungo1080G1469 Vigna mungo HOM05D005869 ORTHO05D007229 1.8e-51 207.2 276 44.6
MCO09G131 Micromonas commoda HOM05D005869 ORTHO05D007229 4.0e-51 206.1 291 40.9
Sed0028093 Sechium edule HOM05D005869 ORTHO05D007229 1.5e-50 204.1 319 42.0
HanXRQChr08g0210391 Helianthus annuus HOM05D005869 ORTHO05D007229 2.0e-50 203.8 276 44.6
Aa31sc1106G20 Aethionema arabicum HOM05D005869 ORTHO05D007229 1.3e-49 201.1 329 38.6
CBR_g3946 Chara braunii HOM05D005869 ORTHO05D007229 1.1e-48 198.0 272 41.5
CANSAT01G1948 Cannabis sativa HOM05D005869 ORTHO05D007229 9.3e-48 194.9 238 45.4
Cpa.g.sc498.3 Carica papaya HOM05D005869 ORTHO05D007229 2.3e-46 190.3 176 54.5
PRCOL_00000815 Prasinoderma coloniale HOM05D005869 ORTHO05D007229 2.1e-44 183.7 275 40.0
BcaB03g13954 Brassica carinata HOM05D005869 ORTHO05D007229 1.1e-43 181.4 161 55.9
MBI11_g11870_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 4.0e-43 179.5 300 38.3
Lj6A836G36 Lonicera japonica HOM05D005869 ORTHO05D007229 5.8e-42 175.6 285 38.2
Migut.K01075 Erythranthe guttata HOM05D005869 ORTHO05D007229 8.4e-41 171.8 281 36.3
QL03p049767 Quercus lobata HOM05D005869 ORTHO05D007229 1.1e-40 171.4 105 74.3
Sc04g0000040 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.5e-40 170.2 112 70.5
Sc04g0000100 Simmondsia chinensis HOM05D005869 ORTHO05D007229 2.7e-39 166.8 102 73.5
Sabra03G0119100 Salix brachista HOM05D005869 ORTHO05D007229 4.6e-39 166.0 152 53.9
Migut.K01074 Erythranthe guttata HOM05D005869 ORTHO05D007229 7.9e-39 165.2 137 57.7
Os10g0499600 Oryza sativa ssp. japonica HOM05D005869 ORTHO05D007229 1.1e-37 161.4 93 76.3
SGA_v2.0_scaffold201G41354 Striga asiatica HOM05D005869 ORTHO05D007229 2.1e-36 157.1 289 37.0
BcaC05g26813 Brassica carinata HOM05D005869 ORTHO05D007229 4.8e-36 156.0 95 74.7
SMO115G0111 Selaginella moellendorffii HOM05D005869 ORTHO05D007229 4.8e-36 156.0 96 76.0
MSTRG.8048 Avicennia marina HOM05D005869 ORTHO05D007229 9.3e-32 141.7 282 33.0
AUR62005704 Chenopodium quinoa HOM05D005869 ORTHO05D007229 1.2e-31 141.4 273 35.5
Haze_12488 Corylus avellana HOM05D005869 ORTHO05D007229 1.3e-30 137.9 278 36.3
Lsat_1_v5_gn_4_151180 Lactuca sativa HOM05D005869 ORTHO05D007229 6.7e-30 135.6 231 38.1
SalBow7G3994 Salvia bowleyana HOM05D005869 ORTHO05D007229 8.7e-30 135.2 299 35.8
Migut.K01072 Erythranthe guttata HOM05D005869 ORTHO05D007229 4.3e-29 132.9 102 59.8
SalBow2G1918 Salvia bowleyana HOM05D005869 ORTHO05D007229 3.7e-28 129.8 319 33.9
Oeu019435.1 Olea europaea HOM05D005869 ORTHO05D007229 6.9e-27 125.6 273 34.4
FAN07G2435 Fragaria x ananassa HOM05D000001 ORTHO05D010470 5.9e-26 122.5 277 31.4
FAN17G1058 Fragaria x ananassa HOM05D000001 ORTHO05D010470 7.7e-26 122.1 277 32.1
FAN12G1770 Fragaria x ananassa HOM05D000001 ORTHO05D010470 1.7e-25 120.9 312 29.2
Nitab4.5_0000608g0060 Nicotiana tabacum HOM05D005869 ORTHO05D007229 1.6e-23 114.4 194 38.1
Migut.K01076 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.8e-20 103.6 93 53.8
Hund16126 Selenicereus undatus HOM05D005869 ORTHO05D007229 2.8e-20 103.6 219 35.6
Migut.O00624 Erythranthe guttata HOM05D005869 ORTHO05D007229 1.0e-17 95.1 200 33.5
COL.COLO4_06415 Corchorus olitorius HOM05D005869 ORTHO05D007229 1.3e-17 94.7 152 36.2
unitig_26.g10430 Utricularia gibba HOM05D005869 ORTHO05D007229 6.1e-15 85.9 196 32.7
Hund16125 Selenicereus undatus HOM05D005869 ORTHO05D007229 1.0e-14 85.1 50 76.0
QL03p049770 Quercus lobata HOM05D005869 ORTHO05D007229 3.9e-14 83.2 109 43.1
Dinv19137 Davidia involucrata HOM05D005869 ORTHO05D007229 5.2e-14 82.8 138 37.7
Actinidia34002 Actinidia chinensis HOM05D005869 ORTHO05D007229 4.4e-13 79.7 46 76.1
Sc04g0000050 Simmondsia chinensis HOM05D005869 ORTHO05D007229 9.7e-13 78.6 137 34.3
Sc04g0000090 Simmondsia chinensis HOM05D005869 ORTHO05D007229 1.3e-12 78.2 137 35.0
Ca_03922_v3 Cicer arietinum L. HOM05D005869 ORTHO05D007229 3.7e-12 76.6 138 34.1
Migut.K01073 Erythranthe guttata HOM05D005869 ORTHO05D007229 2.7e-07 60.5 97 35.1
SEGI_05009 Sequoiadendron giganteum HOM05D005869 ORTHO05D007229 1.4e-06 58.2 96 39.6


User provided reference genes

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