Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.0e-285 984.9 460 100.0
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 5.4e-270 933.7 453 93.8
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 6.9e-209 730.7 463 70.4
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 6.7e-204 714.1 467 69.8
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 3.2e-198 695.3 460 68.9
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 3.3e-195 685.3 450 67.6
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 2.8e-194 682.2 449 67.0
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 8.2e-194 680.6 460 64.8
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.8e-193 679.5 449 67.3
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 3.1e-193 678.7 459 64.9
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 3.1e-193 678.7 451 67.6
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 6.9e-193 677.6 464 65.9
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 1.5e-192 676.4 450 66.4
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-192 676.4 449 66.8
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 2.0e-192 676.0 450 67.1
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 2.0e-192 676.0 446 66.4
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 2.0e-192 676.0 451 66.5
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 5.9e-192 674.5 460 65.0
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 7.7e-192 674.1 450 65.6
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.3e-191 673.3 462 64.1
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.3e-191 673.3 451 65.9
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 2.2e-191 672.5 446 66.1
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.2e-191 672.5 449 66.6
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 5.0e-191 671.4 451 65.6
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 5.0e-191 671.4 451 65.6
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 6.5e-191 671.0 452 66.4
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 6.5e-191 671.0 451 65.4
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 6.5e-191 671.0 451 65.4
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.5e-190 669.1 451 66.7
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 2.5e-190 669.1 451 65.9
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 3.2e-190 668.7 451 65.9
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 4.2e-190 668.3 451 66.3
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 4.2e-190 668.3 450 66.2
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 5.5e-190 667.9 450 66.0
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 5.5e-190 667.9 461 64.6
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 5.5e-190 667.9 461 64.6
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 7.2e-190 667.5 450 66.7
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 7.2e-190 667.5 449 66.4
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 9.4e-190 667.2 450 65.3
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 2.1e-189 666.0 451 66.1
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 2.7e-189 665.6 455 65.7
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.6e-189 665.2 451 66.5
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 3.6e-189 665.2 460 65.7
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 4.6e-189 664.8 450 65.8
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 4.6e-189 664.8 451 65.4
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 7.9e-189 664.1 450 65.8
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 7.9e-189 664.1 450 65.1
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.0e-188 663.7 467 63.4
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.8e-188 662.9 451 64.5
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.8e-188 662.9 450 65.6
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.8e-188 662.9 450 65.6
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.3e-188 662.5 454 64.5
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 2.3e-188 662.5 469 63.1
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 3.0e-188 662.1 452 65.9
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 5.1e-188 661.4 451 65.4
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 8.8e-188 660.6 451 65.6
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.1e-187 660.2 451 63.9
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.1e-187 660.2 443 66.8
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.0e-187 659.4 453 64.0
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 2.6e-187 659.1 451 65.2
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.3e-187 658.7 451 65.9
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 4.3e-187 658.3 454 65.0
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.3e-186 656.8 460 63.3
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 6.3e-186 654.4 462 63.2
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 6.3e-186 654.4 472 61.2
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 3.4e-184 648.7 450 64.0
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.0e-183 647.1 460 63.5
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.7e-183 646.4 451 63.2
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 8.5e-183 644.0 450 64.0
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.1e-182 643.7 450 64.2
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.9e-182 642.9 450 64.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 2.5e-182 642.5 450 64.0
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 2.5e-182 642.5 458 62.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 1.6e-181 639.8 450 64.2
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 6.7e-180 634.4 450 62.9
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 6.7e-180 634.4 450 63.3
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 4.8e-178 628.2 458 61.8
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 3.1e-177 625.5 451 61.9
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 4.1e-177 625.2 477 59.7
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 2.0e-176 622.9 449 61.5
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 4.5e-176 621.7 444 62.4
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.7e-175 619.8 451 61.0
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 4.2e-174 615.1 448 61.8
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.7e-173 612.5 450 60.4
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 3.3e-171 605.5 460 60.4
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 1.6e-168 596.7 488 56.6
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 8.5e-167 590.9 450 58.9
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 4.7e-165 585.1 464 57.5
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 3.0e-164 582.4 486 56.0
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 1.8e-161 573.2 394 64.5
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.7e-157 559.3 450 56.2
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 5.7e-147 525.0 443 54.9
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.5e-142 510.4 340 66.5
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.2e-141 507.3 338 67.8
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.0e-140 504.2 341 67.2
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.0e-140 504.2 341 67.2
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.3e-140 503.1 337 66.5
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.8e-140 501.5 337 66.8
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.6e-139 499.6 338 67.2
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 7.5e-139 498.0 338 65.7
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 9.8e-139 497.7 337 66.8
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.1e-134 484.2 352 63.9
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 9.5e-134 481.1 321 67.9
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 6.8e-132 474.9 337 63.2
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-131 474.2 289 70.9
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 5.2e-124 448.7 277 72.2
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 9.2e-121 438.0 289 66.4
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.1e-117 426.8 280 67.5
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 2.2e-114 416.8 337 58.2
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.2e-114 416.8 291 63.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 3.0e-111 406.4 451 43.5
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.3e-105 384.8 280 62.1
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.5e-104 382.9 280 61.4
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 2.3e-103 380.2 488 39.1
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.6e-51 208.0 143 59.4
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.2e-47 193.0 110 75.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.2e-47 193.0 110 75.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-46 191.8 110 74.5
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 5.9e-43 179.5 160 53.1
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.1e-23 115.5 88 59.1
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 8.1e-08 62.8 40 65.0


User provided reference genes

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