Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 1.4e-113 412.9 204 100.0
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 2.5e-38 162.9 152 55.3
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 1.1e-36 157.5 153 51.6
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 1.0e-34 151.0 130 55.4
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 1.0e-34 151.0 91 70.3
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 3.8e-34 149.1 95 65.3
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 5.0e-34 148.7 102 62.7
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 8.5e-34 147.9 142 52.1
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.1e-33 147.5 110 60.0
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 1.1e-33 147.5 110 60.0
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 1.1e-33 147.5 120 55.8
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 1.9e-33 146.7 89 68.5
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 1.9e-33 146.7 135 53.3
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 3.2e-33 146.0 115 56.5
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 3.2e-33 146.0 115 56.5
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 3.2e-33 146.0 122 54.1
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 3.2e-33 146.0 120 55.8
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 4.2e-33 145.6 118 55.9
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 4.2e-33 145.6 94 63.8
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 4.2e-33 145.6 89 67.4
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 4.2e-33 145.6 129 55.0
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 5.5e-33 145.2 120 54.2
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 5.5e-33 145.2 89 68.5
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 5.5e-33 145.2 119 54.6
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 5.5e-33 145.2 94 62.8
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 5.5e-33 145.2 89 68.5
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 7.2e-33 144.8 89 67.4
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 7.2e-33 144.8 89 68.5
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 9.4e-33 144.4 118 55.9
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 9.4e-33 144.4 111 57.7
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 9.4e-33 144.4 120 53.3
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 9.4e-33 144.4 125 52.8
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 9.4e-33 144.4 110 58.2
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 9.4e-33 144.4 93 68.8
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 9.4e-33 144.4 89 67.4
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 1.2e-32 144.1 89 67.4
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.6e-32 143.7 89 67.4
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.6e-32 143.7 110 58.2
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.6e-32 143.7 91 65.9
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 2.1e-32 143.3 89 67.4
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 2.1e-32 143.3 110 58.2
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 2.7e-32 142.9 89 66.3
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 2.7e-32 142.9 89 66.3
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 2.7e-32 142.9 89 66.3
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 2.7e-32 142.9 129 52.7
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 3.6e-32 142.5 89 65.2
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 3.6e-32 142.5 127 51.2
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 4.6e-32 142.1 172 43.0
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 4.6e-32 142.1 94 62.8
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 4.6e-32 142.1 89 65.2
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 4.6e-32 142.1 89 65.2
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 4.6e-32 142.1 91 64.8
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 6.1e-32 141.7 120 52.5
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 6.1e-32 141.7 91 63.7
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 6.1e-32 141.7 89 67.4
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 7.9e-32 141.4 126 52.4
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 1.0e-31 141.0 112 55.4
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 1.0e-31 141.0 96 61.5
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 1.4e-31 140.6 89 66.3
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.4e-31 140.6 111 58.6
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 1.4e-31 140.6 94 60.6
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 1.8e-31 140.2 91 64.8
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.8e-31 140.2 89 65.2
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 1.8e-31 140.2 89 65.2
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 1.8e-31 140.2 170 42.4
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.8e-31 140.2 125 51.2
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 1.8e-31 140.2 91 64.8
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 1.8e-31 140.2 120 52.5
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 2.3e-31 139.8 89 67.4
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 2.3e-31 139.8 109 56.9
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 2.3e-31 139.8 128 52.3
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 3.9e-31 139.0 111 56.8
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 3.9e-31 139.0 126 53.2
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 3.9e-31 139.0 159 48.4
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 5.1e-31 138.7 89 65.2
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 5.1e-31 138.7 128 50.0
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 6.7e-31 138.3 89 65.2
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 6.7e-31 138.3 89 66.3
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 8.8e-31 137.9 136 47.8
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.1e-30 137.5 89 64.0
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 3.3e-30 136.0 132 52.3
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 1.3e-29 134.0 122 49.2
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.3e-29 134.0 89 62.9
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 1.7e-29 133.7 89 62.9
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 2.2e-29 133.3 121 48.8
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 6.3e-29 131.7 130 48.5
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.1e-28 131.0 141 46.1
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 2.4e-28 129.8 120 50.8
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 9.1e-28 127.9 112 52.7
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 1.5e-27 127.1 102 55.9
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 2.6e-27 126.3 117 50.4
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 4.5e-27 125.6 147 43.5
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 1.0e-26 124.4 89 58.4
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.2e-24 117.5 89 53.9
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.6e-24 117.1 120 46.7
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.4e-23 114.0 71 66.2
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 5.3e-20 102.1 88 50.0
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 1.8e-15 87.0 53 64.2
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.8e-15 87.0 66 57.6
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 2.0e-14 83.6 120 41.7
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 3.3e-14 82.8 120 36.7
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 7.5e-14 81.6 57 59.6
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.7e-13 80.5 106 38.7
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 1.1e-12 77.8 52 63.5
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 2.7e-08 63.2 79 43.0


User provided reference genes

Program Settings