Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_8280 Physcomitrium patens HOM05D022662 ORTHO05D006223 4.1e-129 464.9 268 100.0
Pp3c3_3640 Physcomitrium patens HOM05D022662 ORTHO05D006223 4.7e-93 345.1 255 78.8
Pp3c26_11940 Physcomitrium patens HOM05D022662 ORTHO05D006223 2.0e-75 286.6 259 66.8
Pp3c1_4130 Physcomitrium patens HOM05D022662 ORTHO05D006223 4.7e-40 169.1 247 49.0
Pp3c3_10930 Physcomitrium patens HOM05D022662 ORTHO05D006223 4.7e-16 89.4 203 30.0
Mapoly0033s0033 Marchantia polymorpha HOM05D005423 ORTHO05D006223 3.0e-15 86.7 202 37.1
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 1.7e-10 70.9 151 31.1
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 5.0e-10 69.3 158 30.4
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 7.3e-09 65.5 151 27.8
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 1.2e-08 64.7 146 26.7
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.1e-08 63.9 131 33.6
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 2.8e-08 63.5 133 29.3
Nn5g28818 Nelumbo nucifera HOM05D007205 ORTHO05D009175 6.1e-08 62.4 126 33.3
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 8.0e-08 62.0 145 27.6
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 1.0e-07 61.6 159 27.7
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 1.8e-07 60.8 133 26.3
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 2.3e-07 60.5 153 29.4
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.1e-07 60.1 131 29.8
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 3.1e-07 60.1 131 29.8
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 3.1e-07 60.1 164 26.2
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 4.0e-07 59.7 133 26.3
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 4.0e-07 59.7 156 28.2
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 5.2e-07 59.3 146 27.4
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 5.2e-07 59.3 154 28.6
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 5.2e-07 59.3 134 27.6
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 8.9e-07 58.5 154 26.6
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 8.9e-07 58.5 136 30.9
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 1.2e-06 58.2 155 28.4
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 1.5e-06 57.8 136 32.4
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 2.6e-06 57.0 155 28.4
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 3.4e-06 56.6 116 33.6
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 4.4e-06 56.2 133 25.6
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 4.4e-06 56.2 111 30.6
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 4.4e-06 56.2 157 24.8
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 5.8e-06 55.8 129 25.6
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 5.8e-06 55.8 147 29.9
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 5.8e-06 55.8 160 27.5
VMungo0251G0055 Vigna mungo HOM05D007205 ORTHO05D009175 5.8e-06 55.8 138 29.7
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 7.5e-06 55.5 121 30.6
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 7.5e-06 55.5 155 29.7
Nitab4.5_0009996g0030 Nicotiana tabacum HOM05D007205 ORTHO05D009175 9.8e-06 55.1 132 31.1


User provided reference genes

Program Settings