Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 4.7e-120 434.5 210 100.0
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 5.4e-60 235.0 150 76.0
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 5.1e-58 228.4 144 75.7
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 1.6e-43 180.3 127 65.4
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 3.3e-41 172.6 128 60.2
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 8.7e-34 147.9 105 59.0
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 1.1e-33 147.5 144 50.0
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 1.1e-33 147.5 102 64.7
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 1.9e-33 146.7 99 64.6
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 2.5e-33 146.4 111 56.8
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.5e-33 146.4 130 53.8
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 2.5e-33 146.4 105 61.9
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 2.5e-33 146.4 103 63.1
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 3.3e-33 146.0 111 60.4
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 4.3e-33 145.6 99 63.6
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 5.7e-33 145.2 117 58.1
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 5.7e-33 145.2 105 60.0
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 7.4e-33 144.8 118 57.6
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 7.4e-33 144.8 118 54.2
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 7.4e-33 144.8 100 64.0
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 7.4e-33 144.8 108 61.1
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 9.6e-33 144.4 100 64.0
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 9.6e-33 144.4 100 64.0
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 9.6e-33 144.4 103 64.1
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 1.3e-32 144.1 107 62.6
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 1.6e-32 143.7 111 57.7
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 1.6e-32 143.7 118 60.2
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 1.6e-32 143.7 118 60.2
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 1.6e-32 143.7 118 60.2
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 1.6e-32 143.7 118 60.2
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 1.6e-32 143.7 118 60.2
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 1.6e-32 143.7 107 62.6
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 2.1e-32 143.3 104 60.6
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 2.1e-32 143.3 104 60.6
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 2.1e-32 143.3 104 61.5
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 2.8e-32 142.9 106 61.3
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 2.8e-32 142.9 102 61.8
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 3.7e-32 142.5 129 51.2
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 3.7e-32 142.5 129 51.2
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 3.7e-32 142.5 118 55.9
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 3.7e-32 142.5 104 62.5
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 4.8e-32 142.1 108 55.6
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 4.8e-32 142.1 106 61.3
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 6.2e-32 141.7 127 53.5
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 6.2e-32 141.7 118 58.5
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 6.2e-32 141.7 103 57.3
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 8.2e-32 141.4 140 52.9
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 8.2e-32 141.4 107 61.7
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 8.2e-32 141.4 107 61.7
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 8.2e-32 141.4 107 61.7
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 8.2e-32 141.4 107 61.7
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 8.2e-32 141.4 107 61.7
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 8.2e-32 141.4 110 58.2
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 8.2e-32 141.4 104 60.6
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 8.2e-32 141.4 103 61.2
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 8.2e-32 141.4 103 61.2
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 8.2e-32 141.4 130 51.5
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.8e-31 140.2 123 55.3
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 1.8e-31 140.2 103 57.3
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 2.4e-31 139.8 103 61.2
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 2.4e-31 139.8 143 51.0
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 2.4e-31 139.8 99 60.6
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 2.4e-31 139.8 131 51.1
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 2.4e-31 139.8 105 56.2
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 2.4e-31 139.8 123 56.1
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 3.1e-31 139.4 105 54.3
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 3.1e-31 139.4 143 50.3
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 3.1e-31 139.4 102 60.8
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 4.1e-31 139.0 105 55.2
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 5.3e-31 138.7 99 59.6
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 5.3e-31 138.7 99 59.6
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 5.3e-31 138.7 104 60.6
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 5.3e-31 138.7 137 48.9
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 6.9e-31 138.3 99 60.6
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 6.9e-31 138.3 103 59.2
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 9.0e-31 137.9 112 55.4
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 9.0e-31 137.9 108 59.3
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.2e-30 137.5 101 62.4
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 1.2e-30 137.5 99 60.6
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 1.2e-30 137.5 107 52.3
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 2.0e-30 136.7 149 50.3
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 2.0e-30 136.7 103 59.2
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 2.0e-30 136.7 120 51.7
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 2.0e-30 136.7 104 59.6
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 2.0e-30 136.7 104 59.6
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 2.6e-30 136.3 132 52.3
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 3.4e-30 136.0 104 59.6
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 3.4e-30 136.0 95 60.0
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 4.5e-30 135.6 95 60.0
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 4.5e-30 135.6 111 55.0
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 5.8e-30 135.2 144 47.9
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 5.8e-30 135.2 102 58.8
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 5.8e-30 135.2 105 57.1
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 7.6e-30 134.8 111 55.0
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 7.6e-30 134.8 111 54.1
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 1.0e-29 134.4 106 56.6
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 1.3e-29 134.0 131 50.4
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 1.7e-29 133.7 95 56.8
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 1.7e-29 133.7 103 59.2
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 2.2e-29 133.3 95 57.9
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 2.9e-29 132.9 99 56.6
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 2.9e-29 132.9 99 56.6
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 2.9e-29 132.9 111 54.1
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 2.9e-29 132.9 106 56.6
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 5.0e-29 132.1 129 49.6
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 8.4e-29 131.3 136 49.3
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 2.5e-28 129.8 99 52.5
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 3.2e-28 129.4 101 58.4
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 4.2e-28 129.0 106 54.7
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 7.1e-28 128.3 106 55.7
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 2.3e-26 123.2 107 50.5
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 4.8e-24 115.5 67 68.7
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 4.1e-23 112.5 96 54.2
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 9.0e-23 111.3 100 48.0
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 9.0e-23 111.3 100 48.0
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 4.2e-20 102.4 71 56.3
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 2.1e-19 100.1 99 44.4
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 4.6e-19 99.0 78 62.8
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 1.0e-18 97.8 126 41.3
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 1.8e-18 97.1 78 59.0
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 1.8e-18 97.1 73 52.1
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 1.7e-16 90.5 78 48.7
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 6.5e-13 78.6 50 66.0
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 3.3e-09 66.2 42 64.3
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 8.2e-08 61.6 40 62.5


User provided reference genes

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