Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 0.0e+00 1078.5 548 100.0
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 8.3e-161 571.2 550 54.5
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 8.9e-147 524.6 561 49.9
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 1.0e-142 511.1 539 50.1
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 3.6e-140 502.7 539 49.9
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 2.6e-138 496.5 539 49.0
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 9.9e-138 494.6 542 48.9
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 1.9e-136 490.3 541 50.5
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 7.1e-136 488.4 540 49.8
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 2.1e-135 486.9 546 46.9
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 2.1e-135 486.9 544 50.0
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 4.6e-135 485.7 542 48.7
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 2.3e-134 483.4 541 47.7
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 6.6e-134 481.9 548 47.3
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 8.7e-134 481.5 541 49.0
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 8.7e-134 481.5 541 49.0
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 1.1e-133 481.1 543 49.4
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 1.5e-133 480.7 541 48.4
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 4.3e-133 479.2 547 48.1
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 4.3e-133 479.2 539 47.3
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 1.3e-132 477.6 541 48.1
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 2.8e-132 476.5 544 46.5
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 4.8e-132 475.7 541 48.1
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 1.4e-131 474.2 540 46.5
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 3.1e-131 473.0 544 48.5
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 4.0e-131 472.6 539 47.5
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 5.3e-131 472.2 543 47.3
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 6.9e-131 471.9 539 47.1
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 6.9e-131 471.9 544 47.2
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 7.6e-130 468.4 546 45.8
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 7.6e-130 468.4 541 46.6
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 7.6e-130 468.4 548 47.4
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 1.3e-129 467.6 545 46.2
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 2.2e-129 466.8 541 47.0
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 2.9e-129 466.5 543 46.4
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 2.9e-129 466.5 539 46.9
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 2.9e-129 466.5 539 48.4
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 3.8e-129 466.1 541 45.7
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 6.4e-129 465.3 543 45.9
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 8.4e-129 464.9 542 47.2
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 7.1e-128 461.8 560 47.5
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 1.2e-127 461.1 543 46.0
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 2.1e-127 460.3 543 46.4
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 2.7e-127 459.9 541 46.0
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 6.0e-127 458.8 541 46.0
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 1.0e-126 458.0 543 46.4
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 1.0e-126 458.0 541 46.0
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 1.3e-126 457.6 541 46.0
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 3.9e-126 456.1 540 45.9
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 3.9e-126 456.1 556 45.3
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 3.9e-126 456.1 546 45.2
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 1.5e-125 454.1 540 45.6
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 2.5e-125 453.4 540 46.3
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 4.3e-125 452.6 543 44.6
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 4.3e-125 452.6 543 45.1
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 5.6e-125 452.2 557 45.2
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 5.6e-125 452.2 541 45.3
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 7.4e-125 451.8 540 46.5
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 1.6e-124 450.7 540 46.3
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 1.4e-123 447.6 510 45.7
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 1.4e-123 447.6 544 45.6
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 1.4e-123 447.6 543 45.5
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 3.1e-123 446.4 544 44.3
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 5.3e-123 445.7 544 45.0
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 6.9e-123 445.3 544 46.0
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 9.0e-123 444.9 544 44.7
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 2.0e-122 443.7 544 44.9
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 3.4e-122 443.0 541 45.5
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 1.3e-121 441.0 549 45.0
AagrBONN_evm.TU.Sc2ySwM_344.4267 Anthoceros agrestis HOM05D005625 ORTHO05D007564 2.9e-121 439.9 463 50.5
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 3.8e-121 439.5 540 45.4
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 8.4e-121 438.3 541 44.5
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 5.5e-120 435.6 541 45.3
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 7.1e-120 435.3 586 43.9
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 9.3e-120 434.9 540 45.0
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 2.3e-118 430.3 599 40.6
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 2.3e-118 430.3 540 44.3
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 1.2e-114 417.9 541 44.4
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 4.2e-112 409.5 541 42.3
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 6.1e-111 405.6 593 40.6
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 6.1e-111 405.6 465 47.5
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 6.1e-111 405.6 570 41.6
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 2.3e-110 403.7 514 44.9
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 5.1e-110 402.5 556 43.5
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 5.7e-109 399.1 443 48.5
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 2.2e-108 397.1 541 41.8
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 8.2e-108 395.2 541 42.1
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 1.4e-107 394.4 541 41.8
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 5.3e-107 392.5 540 41.3
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 1.2e-106 391.3 551 42.5
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 4.3e-101 372.9 550 40.4
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 8.2e-100 368.6 541 40.3
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 4.1e-99 366.3 409 46.9
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 3.4e-98 363.2 448 44.2
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 5.9e-98 362.5 416 46.6
AagrBONN_evm.TU.Sc2ySwM_344.5166 Anthoceros agrestis HOM05D005625 ORTHO05D007564 1.3e-97 361.3 387 49.9
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 5.5e-96 355.9 540 40.2
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 9.4e-96 355.1 400 47.2
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 2.3e-94 350.5 540 40.6
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 3.0e-86 323.6 574 36.9
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 1.3e-76 291.6 569 36.2
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 4.8e-76 289.7 509 36.1
PRCOL_00002543 Prasinoderma coloniale HOM05D005625 ORTHO05D007564 1.2e-74 285.0 564 34.9
SEGI_17074 Sequoiadendron giganteum HOM05D005625 ORTHO05D007564 3.5e-74 283.5 299 50.5
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 8.0e-71 272.3 355 42.3
Atru.chr11.652 Acer truncatum HOM05D005625 ORTHO05D007564 2.3e-70 270.8 288 49.0
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 4.0e-70 270.0 355 42.0
Cre02.g095113 Chlamydomonas reinhardtii HOM05D005625 ORTHO05D007564 1.9e-64 251.1 530 31.9
ClCG03G011780 Citrullus lanatus HOM05D005625 ORTHO05D007564 4.3e-64 250.0 298 46.6
FAN08G2869 Fragaria x ananassa HOM05D005625 ORTHO05D007564 8.1e-47 192.6 203 50.2
Nitab4.5_0000213g0250 Nicotiana tabacum HOM05D005625 ORTHO05D007564 6.6e-41 172.9 201 46.3
Os05g0105300 Oryza sativa ssp. japonica HOM05D005625 ORTHO05D007564 4.0e-38 163.7 169 50.9
PGSC0003DMG400019987 Solanum tuberosum HOM05D005625 ORTHO05D007564 3.9e-33 147.1 153 47.7
ClCG03G011750 Citrullus lanatus HOM05D005625 ORTHO05D007564 1.1e-32 145.6 154 46.1
Glyma.15G127567 Glycine max HOM05D005625 ORTHO05D007564 1.9e-27 128.3 136 47.8
Nitab4.5_0000213g0260 Nicotiana tabacum HOM05D005625 ORTHO05D007564 2.1e-26 124.8 130 48.5
Cfa026593 Carpinus fangiana HOM05D005625 ORTHO05D007564 8.7e-25 119.4 453 25.8
Peaxi162Scf00078g00534 Petunia axillaris HOM05D005625 ORTHO05D007564 9.6e-24 115.9 132 45.5
Glyma.15G127633 Glycine max HOM05D005625 ORTHO05D007564 7.9e-18 96.3 124 41.9
Solyc11g042500.3 Solanum lycopersicum HOM05D005625 ORTHO05D007564 2.3e-17 94.7 92 50.0
Hund08558 Selenicereus undatus HOM05D005625 ORTHO05D007564 3.9e-17 94.0 90 54.4
Nitab4.5_0001155g0020 Nicotiana tabacum HOM05D005625 ORTHO05D007564 1.9e-16 91.7 94 50.0
BcaB04g17633 Brassica carinata HOM05D005625 ORTHO05D007564 9.6e-16 89.4 101 44.6
TPR.G26547 Trifolium pratense HOM05D005625 ORTHO05D022022 8.7e-09 66.2 106 34.0
ClCG03G011760 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.6e-07 62.0 75 42.7
CBR_g27740 Chara braunii HOM05D000738 ORTHO05D000675 3.7e-07 60.8 74 45.9
THA.LOC104823212 Tarenaya hassleriana HOM05D005979 ORTHO05D007848 3.7e-07 60.8 69 46.4
Aqoxy2G00350 Aquilegia oxysepala HOM05D005979 ORTHO05D007848 6.2e-07 60.1 77 42.9
Potri.006G041400 Populus trichocarpa HOM05D005979 ORTHO05D007848 8.1e-07 59.7 77 41.6
Sabra06G0028100 Salix brachista HOM05D005979 ORTHO05D007848 8.1e-07 59.7 77 41.6
Ah.09g228190 Amaranthus hybridus HOM05D005979 ORTHO05D007848 1.8e-06 58.5 77 40.3
Sc18g0002150 Simmondsia chinensis HOM05D005979 ORTHO05D007848 2.4e-06 58.2 77 41.6
CSS0035132 Camellia sinensis var. sinensis HOM05D005979 ORTHO05D007848 3.1e-06 57.8 77 39.0
Glyma.05G203800 Glycine max HOM05D005979 ORTHO05D007848 3.1e-06 57.8 77 41.6
Gohir.D04G132100 Gossypium hirsutum HOM05D005979 ORTHO05D007848 3.1e-06 57.8 77 39.0
Lsat_1_v5_gn_3_107600 Lactuca sativa HOM05D000629 ORTHO05D013393 3.1e-06 57.8 73 45.2
Thecc.05G139000 Theobroma cacao HOM05D005979 ORTHO05D007848 3.1e-06 57.8 77 39.0
CARHR084710 Cardamine hirsuta HOM05D005979 ORTHO05D007848 4.0e-06 57.4 77 40.3
CiPaw.09G046000 Carya illinoinensis HOM05D005979 ORTHO05D007848 4.0e-06 57.4 77 40.3
Manes.09G007200 Manihot esculenta HOM05D005979 ORTHO05D007848 4.0e-06 57.4 77 40.3
AL3G21560 Arabidopsis lyrata HOM05D005979 ORTHO05D007848 5.3e-06 57.0 77 39.0
Carub.0003s0939 Capsella rubella HOM05D005979 ORTHO05D007848 5.3e-06 57.0 77 39.0
CAN.G637.20 Capsicum annuum HOM05D005979 ORTHO05D007848 5.3e-06 57.0 77 39.0
ClCG09G016040 Citrullus lanatus HOM05D005979 ORTHO05D007848 5.3e-06 57.0 77 39.0
Haze_19714 Corylus avellana HOM05D005979 ORTHO05D007848 5.3e-06 57.0 77 41.6
Gohir.A13G100300 Gossypium hirsutum HOM05D005979 ORTHO05D007848 5.3e-06 57.0 77 39.0
Gohir.D13G103900 Gossypium hirsutum HOM05D005979 ORTHO05D007848 5.3e-06 57.0 77 39.0
Gorai.013G116500 Gossypium raimondii HOM05D005979 ORTHO05D007848 5.3e-06 57.0 77 39.0
GSVIVG01033606001 Vitis vinifera HOM05D005979 ORTHO05D007848 5.3e-06 57.0 77 40.3
AUR62029060 Chenopodium quinoa HOM05D005979 ORTHO05D007848 6.9e-06 56.6 77 40.3
Duzib093G1926 Durio zibethinus HOM05D005979 ORTHO05D007848 6.9e-06 56.6 77 39.0
AUR62033954 Chenopodium quinoa HOM05D005979 ORTHO05D007848 9.0e-06 56.2 69 43.5
Migut.B00389 Erythranthe guttata HOM05D005979 ORTHO05D007848 9.0e-06 56.2 77 39.0
Lalb_Chr02g0156521 Lupinus albus HOM05D005979 ORTHO05D007848 9.0e-06 56.2 84 38.1
PGSC0003DMG400031053 Solanum tuberosum HOM05D005979 ORTHO05D007848 9.0e-06 56.2 77 39.0


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