Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_24550 Physcomitrium patens HOM05D005916 ORTHO05D007168 2.4e-75 285.4 145 100.0
Mapoly0098s0031 Marchantia polymorpha HOM05D005916 ORTHO05D007168 1.7e-28 129.8 130 46.9
Pp3c26_180 Physcomitrium patens HOM05D005916 ORTHO05D007168 3.2e-27 125.6 100 60.0
PSO063G1306 Papaver somniferum HOM05D005916 ORTHO05D007168 1.1e-24 117.1 106 50.9
PSO782G0331 Papaver somniferum HOM05D005916 ORTHO05D007168 1.1e-24 117.1 106 50.9
Carub.0006s1828 Capsella rubella HOM05D005916 ORTHO05D007168 1.5e-24 116.7 106 50.9
A02p05910 Brassica napus HOM05D005916 ORTHO05D007168 1.9e-24 116.3 106 50.9
BraA02t05543Z Brassica rapa HOM05D005916 ORTHO05D007168 1.9e-24 116.3 106 50.9
RcHm_v2.0_Chr1g0373201 Rosa chinensis HOM05D005916 ORTHO05D007168 1.9e-24 116.3 121 47.1
Atru.chr6.1973 Acer truncatum HOM05D005916 ORTHO05D007168 4.3e-24 115.2 106 50.9
Potri.012G113400 Populus trichocarpa HOM05D005916 ORTHO05D007168 7.4e-24 114.4 127 45.7
BcaB08g36557 Brassica carinata HOM05D005916 ORTHO05D007168 9.6e-24 114.0 106 50.0
Thhalv10014735m.g Eutrema salsugineum HOM05D005916 ORTHO05D007168 9.6e-24 114.0 106 50.0
Sp6g24470 Schrenkiella parvula HOM05D005916 ORTHO05D007168 9.6e-24 114.0 106 50.0
Aqoxy3G02650 Aquilegia oxysepala HOM05D005916 ORTHO05D007168 1.3e-23 113.6 134 44.0
BNapus_Darmor_BZH_scaffold_38p01960 Brassica napus HOM05D005916 ORTHO05D007168 1.6e-23 113.2 106 50.0
BolC2t06995H Brassica oleracea HOM05D005916 ORTHO05D007168 1.6e-23 113.2 106 50.0
Prupe.2G269700 Prunus persica HOM05D005916 ORTHO05D007168 1.6e-23 113.2 106 50.0
CANSAT56G4429 Cannabis sativa HOM05D005916 ORTHO05D007168 2.1e-23 112.8 121 46.3
PSO541G5205 Papaver somniferum HOM05D005916 ORTHO05D007168 2.1e-23 112.8 105 49.5
Potri.015G110900 Populus trichocarpa HOM05D005916 ORTHO05D007168 2.1e-23 112.8 105 50.5
FvH4_7g26530 Fragaria vesca HOM05D005916 ORTHO05D007168 2.8e-23 112.5 121 47.9
FAN01G2833 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.8e-23 112.5 128 46.9
FAN06G3885 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.8e-23 112.5 121 45.5
AL6G31440 Arabidopsis lyrata HOM05D005916 ORTHO05D007168 4.8e-23 111.7 106 49.1
FAN10G1904 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.8e-23 111.7 126 47.6
Sabra15G0132700 Salix brachista HOM05D005916 ORTHO05D007168 6.2e-23 111.3 103 50.5
PSO675G3127 Papaver somniferum HOM05D005916 ORTHO05D007168 8.2e-23 110.9 104 49.0
QL09p027336 Quercus lobata HOM05D005916 ORTHO05D007168 8.2e-23 110.9 106 48.1
MBI04_g13855_MAGBIO Magnolia biondii HOM05D005916 ORTHO05D007168 1.1e-22 110.5 101 51.5
DCAR_014647 Daucus carota HOM05D005916 ORTHO05D007168 1.4e-22 110.2 119 45.4
THA.LOC104799659 Tarenaya hassleriana HOM05D005916 ORTHO05D007168 1.4e-22 110.2 106 49.1
TWI39G0778 Tripterygium wilfordii HOM05D005916 ORTHO05D007168 1.4e-22 110.2 97 52.6
ATR1098G017 Amborella trichopoda HOM05D005916 ORTHO05D007168 1.8e-22 109.8 98 53.1
BcaC04g19397 Brassica carinata HOM05D005916 ORTHO05D007168 1.8e-22 109.8 103 49.5
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 1.8e-22 109.8 103 49.5
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 1.8e-22 109.8 103 49.5
Ciclev10032791m.g Citrus clementina HOM05D005916 ORTHO05D007168 1.8e-22 109.8 100 51.0
HPP92_020684 Vanilla planifolia HOM05D005916 ORTHO05D007168 1.8e-22 109.8 106 48.1
Cpa.g.sc13.218 Carica papaya HOM05D005916 ORTHO05D007168 2.4e-22 109.4 120 45.0
CDE06G1827 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 2.4e-22 109.4 98 52.0
Eucgr.A02936 Eucalyptus grandis HOM05D005916 ORTHO05D007168 2.4e-22 109.4 120 45.0
SGA_v2.0_scaffold136G34977 Striga asiatica HOM05D005916 ORTHO05D007168 2.4e-22 109.4 105 49.5
CARHR192950 Cardamine hirsuta HOM05D005916 ORTHO05D007168 3.1e-22 109.0 103 49.5
Gohir.D07G049300 Gossypium hirsutum HOM05D005916 ORTHO05D007168 3.1e-22 109.0 120 45.0
Gorai.001G052400 Gossypium raimondii HOM05D005916 ORTHO05D007168 3.1e-22 109.0 120 45.0
CsaV3_4G004400 Cucumis sativus L. HOM05D005916 ORTHO05D007168 4.0e-22 108.6 106 48.1
Manes.06G129600 Manihot esculenta HOM05D005916 ORTHO05D007168 4.0e-22 108.6 98 51.0
VMungo0720G1184 Vigna mungo HOM05D005916 ORTHO05D007168 4.0e-22 108.6 127 44.1
EL10Ac5g12406 Beta vulgaris HOM05D005916 ORTHO05D007168 5.3e-22 108.2 106 48.1
SGA_v2.0_scaffold69G23310 Striga asiatica HOM05D005916 ORTHO05D007168 5.3e-22 108.2 121 45.5
TPR.G26100 Trifolium pratense HOM05D005916 ORTHO05D007168 5.3e-22 108.2 120 45.8
AagrBONN_evm.TU.Sc2ySwM_362.2892 Anthoceros agrestis HOM05D005916 ORTHO05D007168 9.0e-22 107.5 128 49.2
Cc00_g13060 Coffea canephora HOM05D005916 ORTHO05D007168 9.0e-22 107.5 105 49.5
Haze_22228 Corylus avellana HOM05D005916 ORTHO05D007168 9.0e-22 107.5 112 44.6
GSVIVG01024482001 Vitis vinifera HOM05D005916 ORTHO05D007168 9.0e-22 107.5 97 51.5
ECA233G3320 Erigeron canadensis HOM05D005916 ORTHO05D007168 1.2e-21 107.1 106 47.2
Oeu046440.1 Olea europaea HOM05D005916 ORTHO05D007168 1.2e-21 107.1 106 47.2
AT5G19910 Arabidopsis thaliana HOM05D005916 ORTHO05D007168 1.5e-21 106.7 98 50.0
Psat6g202080 Pisum sativum HOM05D005916 ORTHO05D007168 1.5e-21 106.7 121 43.8
FAN25G1847 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.0e-21 106.3 127 44.9
Sc17g0004780 Simmondsia chinensis HOM05D005916 ORTHO05D007168 2.0e-21 106.3 106 49.1
COL.COLO4_37304 Corchorus olitorius HOM05D005916 ORTHO05D007168 2.6e-21 105.9 105 47.6
FvH4_5g39330 Fragaria vesca HOM05D005916 ORTHO05D007168 2.6e-21 105.9 106 49.1
FAN08G1750 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.6e-21 105.9 106 49.1
FAN18G1579 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.6e-21 105.9 106 49.1
Glyma.10G242500 Glycine max HOM05D005916 ORTHO05D007168 2.6e-21 105.9 123 43.9
MD01G1174300 Malus domestica HOM05D005916 ORTHO05D007168 2.6e-21 105.9 122 44.3
Os07g0164600 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 2.6e-21 105.9 97 50.5
Os10g0564100 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 2.6e-21 105.9 97 50.5
Phvul.007G063000 Phaseolus vulgaris HOM05D005916 ORTHO05D007168 2.6e-21 105.9 125 43.2
CSS0012195 Camellia sinensis var. sinensis HOM05D005916 ORTHO05D007168 3.4e-21 105.5 97 49.5
Glyma.20G151600 Glycine max HOM05D005916 ORTHO05D007168 3.4e-21 105.5 104 47.1
Gohir.A07G044800 Gossypium hirsutum HOM05D005916 ORTHO05D007168 3.4e-21 105.5 97 50.5
Zm00001eb038950 Zea mays HOM05D005916 ORTHO05D007168 3.4e-21 105.5 97 49.5
MSTRG.8396 Avicennia marina HOM05D005916 ORTHO05D007168 4.5e-21 105.1 105 47.6
Ca_10837_v3 Cicer arietinum L. HOM05D005916 ORTHO05D007168 4.5e-21 105.1 106 47.2
MD07G1241000 Malus domestica HOM05D005916 ORTHO05D007168 4.5e-21 105.1 98 49.0
Dinv34531 Davidia involucrata HOM05D005916 ORTHO05D007168 5.8e-21 104.8 100 48.0
Medtr1g102540 Medicago truncatula HOM05D005916 ORTHO05D007168 5.8e-21 104.8 106 47.2
PGR083G1688 Punica granatum HOM05D005916 ORTHO05D007168 7.6e-21 104.4 97 49.5
arahy.Tifrunner.gnm1.ann1.7NV6YZ Arachis hypogaea HOM05D005916 ORTHO05D007168 1.0e-20 104.0 103 47.6
arahy.Tifrunner.gnm1.ann1.VH0MPJ Arachis hypogaea HOM05D005916 ORTHO05D007168 1.0e-20 104.0 103 47.6
Lj5g0003841 Lotus japonicus HOM05D005916 ORTHO05D007168 1.0e-20 104.0 105 47.6
Nn6g33759 Nelumbo nucifera HOM05D005916 ORTHO05D007168 1.0e-20 104.0 97 48.5
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 1.3e-20 103.6 97 48.5
MELO3C017626.2 Cucumis melo HOM05D005916 ORTHO05D007168 1.3e-20 103.6 98 48.0
Lsat_1_v5_gn_8_11541 Lactuca sativa HOM05D005916 ORTHO05D007168 1.3e-20 103.6 104 46.2
Hund13383 Selenicereus undatus HOM05D005916 ORTHO05D007168 1.3e-20 103.6 97 48.5
Thecc.03G145100 Theobroma cacao HOM05D005916 ORTHO05D007168 1.3e-20 103.6 105 46.7
vmacro09932 Vaccinium macrocarpon HOM05D005916 ORTHO05D007168 1.3e-20 103.6 107 45.8
Nitab4.5_0000103g0220 Nicotiana tabacum HOM05D005916 ORTHO05D007168 2.2e-20 102.8 97 48.5
Solyc03g094030.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 2.2e-20 102.8 97 48.5
Sopen03g024920 Solanum pennellii HOM05D005916 ORTHO05D007168 2.2e-20 102.8 97 48.5
PGSC0003DMG403008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 2.2e-20 102.8 97 48.5
Migut.F01212 Erythranthe guttata HOM05D005916 ORTHO05D007168 2.9e-20 102.4 105 45.7
ClCG07G017200 Citrullus lanatus HOM05D005916 ORTHO05D007168 3.8e-20 102.1 97 47.4
Sed0012421 Sechium edule HOM05D001364 ORTHO05D007168 4.9e-20 101.7 103 46.6
HanXRQChr08g0223361 Helianthus annuus HOM05D005916 ORTHO05D007168 6.5e-20 101.3 98 46.9
AUR62029119 Chenopodium quinoa HOM05D005916 ORTHO05D007168 8.4e-20 100.9 98 46.9
QL02p099223 Quercus lobata HOM05D005916 ORTHO05D007168 8.4e-20 100.9 106 42.5
Atru.chr6.592 Acer truncatum HOM05D005916 ORTHO05D007168 1.4e-19 100.1 110 42.7
HanXRQChr03g0069461 Helianthus annuus HOM05D005916 ORTHO05D007168 1.9e-19 99.8 97 46.4
Lalb_Chr24g0402981 Lupinus albus HOM05D005916 ORTHO05D007168 1.9e-19 99.8 105 45.7
TPR.G9644 Trifolium pratense HOM05D005916 ORTHO05D007168 1.9e-19 99.8 105 45.7
SEGI_39874 Sequoiadendron giganteum HOM05D005916 ORTHO05D007168 9.3e-19 97.4 65 61.5
Hma1.2p1_1014F.1_g247880 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 2.1e-18 96.3 65 61.5
Ah.01g021910 Amaranthus hybridus HOM05D005916 ORTHO05D007168 3.5e-18 95.5 129 41.1
AUR62015003 Chenopodium quinoa HOM05D005916 ORTHO05D007168 4.6e-18 95.1 68 57.4
Lj8A49T46 Lonicera japonica HOM05D005916 ORTHO05D007168 6.0e-18 94.7 99 44.4
Nitab4.5_0003429g0010 Nicotiana tabacum HOM05D005916 ORTHO05D007168 1.3e-17 93.6 97 45.4
CAN.G706.26 Capsicum annuum HOM05D005916 ORTHO05D007168 6.7e-17 91.3 97 45.4
CAN.G297.9 Capsicum annuum HOM05D005916 ORTHO05D007168 3.3e-16 89.0 121 39.7
SMO197G0072 Selaginella moellendorffii HOM05D005916 ORTHO05D007168 5.7e-16 88.2 61 59.0
EL10Ac9g22675 Beta vulgaris HOM05D005916 ORTHO05D007168 7.4e-16 87.8 114 41.2
Dinv21889 Davidia involucrata HOM05D005916 ORTHO05D007168 9.7e-16 87.4 90 45.6
CDE06G2153 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 2.2e-15 86.3 98 44.9
SalBow2G2523 Salvia bowleyana HOM05D005916 ORTHO05D007168 3.7e-15 85.5 122 39.3
CiPaw.07G182800 Carya illinoinensis HOM05D005916 ORTHO05D007168 1.4e-14 83.6 122 37.7
Dinv34527 Davidia involucrata HOM05D005916 ORTHO05D007168 5.3e-14 81.6 73 49.3
PRCOL_00001580 Prasinoderma coloniale HOM05D005916 ORTHO05D007168 2.2e-12 76.3 94 36.2
Hma1.2p1_1014F.1_g247870 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 2.3e-09 66.2 108 34.3
MCO04G185 Micromonas commoda HOM05D005916 ORTHO05D007168 6.7e-09 64.7 62 40.3
Rhsim09G0188200 Rhododendron simsii HOM05D001364 ORTHO05D001316 3.7e-07 58.9 106 31.1
Peaxi162Scf00073g01818 Petunia axillaris HOM05D005916 ORTHO05D007168 4.1e-06 55.5 75 40.0


User provided reference genes

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