Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_23680 Physcomitrium patens HOM05D067035 ORTHO05D003305 0.0e+00 1112.4 574 100.0
Pp3c3_14390 Physcomitrium patens HOM05D067035 ORTHO05D003305 9.3e-155 551.2 576 56.6
Potri.010G138100 Populus trichocarpa HOM05D003025 ORTHO05D003305 2.6e-11 74.7 155 38.1
Hma1.2p1_0428F.1_g150820 Hydrangea macrophylla HOM05D003025 ORTHO05D003305 1.4e-09 68.9 199 33.2
TWI31G1177 Tripterygium wilfordii HOM05D003025 ORTHO05D003305 3.1e-09 67.8 110 44.5
Potri.008G111800 Populus trichocarpa HOM05D003025 ORTHO05D003305 4.1e-09 67.4 253 31.2
CSS0010260 Camellia sinensis var. sinensis HOM05D003025 ORTHO05D003305 7.0e-09 66.6 75 58.7
MD13G1056500 Malus domestica HOM05D003025 ORTHO05D003305 2.7e-08 64.7 60 60.0
Dinv15582 Davidia involucrata HOM05D003025 ORTHO05D003305 3.5e-08 64.3 203 31.5
HPP92_018243 Vanilla planifolia HOM05D003025 ORTHO05D003305 4.5e-08 63.9 59 61.0
arahy.Tifrunner.gnm1.ann1.161SS5 Arachis hypogaea HOM05D003025 ORTHO05D003305 5.9e-08 63.5 76 53.9
Sed0016639 Sechium edule HOM05D003025 ORTHO05D003305 5.9e-08 63.5 78 48.7
VMungo1215G0401 Vigna mungo HOM05D003025 ORTHO05D003305 5.9e-08 63.5 71 56.3
GSVIVG01010102001 Vitis vinifera HOM05D003025 ORTHO05D003305 5.9e-08 63.5 110 39.1
Lalb_Chr10g0099151 Lupinus albus HOM05D003025 ORTHO05D003305 1.0e-07 62.8 110 40.9
Lalb_Chr17g0341461 Lupinus albus HOM05D003025 ORTHO05D003305 1.3e-07 62.4 68 55.9
Sabra08G0084400 Salix brachista HOM05D003025 ORTHO05D003305 1.3e-07 62.4 190 33.7
SGA_v2.0_scaffold16G07826 Striga asiatica HOM05D003025 ORTHO05D003305 1.3e-07 62.4 66 62.1
Glyma.01G064900 Glycine max HOM05D003025 ORTHO05D003305 1.7e-07 62.0 63 58.7
Phvul.003G038300 Phaseolus vulgaris HOM05D003025 ORTHO05D003305 1.7e-07 62.0 71 54.9
BcaC06g31142 Brassica carinata HOM05D003025 ORTHO05D003305 2.9e-07 61.2 56 57.1
A06p42840 Brassica napus HOM05D003025 ORTHO05D003305 2.9e-07 61.2 56 57.1
BolC7t43953H Brassica oleracea HOM05D003025 ORTHO05D003305 2.9e-07 61.2 56 57.1
BraA06t27196Z Brassica rapa HOM05D003025 ORTHO05D003305 2.9e-07 61.2 56 57.1
CANSAT64G2528 Cannabis sativa HOM05D003025 ORTHO05D003305 2.9e-07 61.2 120 41.7
CiPaw.05G121600 Carya illinoinensis HOM05D003025 ORTHO05D003305 2.9e-07 61.2 53 64.2
MBI15_g31908_MAGBIO Magnolia biondii HOM05D003025 ORTHO05D003305 2.9e-07 61.2 57 59.6
Thecc.02G322700 Theobroma cacao HOM05D003025 ORTHO05D003305 2.9e-07 61.2 68 60.3
Gohir.A13G088100 Gossypium hirsutum HOM05D003025 ORTHO05D003305 3.8e-07 60.8 119 41.2
MD16G1055400 Malus domestica HOM05D003025 ORTHO05D003305 3.8e-07 60.8 53 60.4
Prupe.1G293500 Prunus persica HOM05D003025 ORTHO05D003305 3.8e-07 60.8 62 56.5
HPP92_015551 Vanilla planifolia HOM05D003025 ORTHO05D003305 3.8e-07 60.8 171 31.6
Duzib248G1661 Durio zibethinus HOM05D003025 ORTHO05D003305 5.0e-07 60.5 55 63.6
FAN12G3072 Fragaria x ananassa HOM05D003025 ORTHO05D003305 5.0e-07 60.5 57 57.9
Glyma.02G122700 Glycine max HOM05D003025 ORTHO05D003305 5.0e-07 60.5 63 58.7
Lj6A773T133 Lonicera japonica HOM05D003025 ORTHO05D003305 5.0e-07 60.5 106 43.4
PSO478G4016 Papaver somniferum HOM05D003025 ORTHO05D003305 5.0e-07 60.5 51 64.7
Sed0017206 Sechium edule HOM05D003025 ORTHO05D003305 5.0e-07 60.5 80 46.2
Hund09959 Selenicereus undatus HOM05D003025 ORTHO05D003305 5.0e-07 60.5 138 35.5
Solyc04g005290.3 Solanum lycopersicum HOM05D003025 ORTHO05D003305 5.0e-07 60.5 80 45.0
PGSC0003DMG400001936 Solanum tuberosum HOM05D003025 ORTHO05D003305 5.0e-07 60.5 80 45.0
Actinidia07767 Actinidia chinensis HOM05D003025 ORTHO05D003305 6.5e-07 60.1 94 42.6
ClCG05G023550 Citrullus lanatus HOM05D003025 ORTHO05D003305 6.5e-07 60.1 46 69.6
Gohir.A03G106600 Gossypium hirsutum HOM05D003025 ORTHO05D003305 6.5e-07 60.1 55 63.6
Gohir.D02G131800 Gossypium hirsutum HOM05D003025 ORTHO05D003305 6.5e-07 60.1 55 63.6
Gorai.005G147700 Gossypium raimondii HOM05D003025 ORTHO05D003305 6.5e-07 60.1 55 63.6
Gorai.013G097400 Gossypium raimondii HOM05D003025 ORTHO05D003305 6.5e-07 60.1 151 37.1
Sabra10G0106400 Salix brachista HOM05D003025 ORTHO05D003305 6.5e-07 60.1 173 32.9
COL.COLO4_27800 Corchorus olitorius HOM05D003025 ORTHO05D003305 8.5e-07 59.7 180 33.3
Gohir.D13G085500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 8.5e-07 59.7 165 35.8
Sopen04g001270 Solanum pennellii HOM05D003025 ORTHO05D003305 8.5e-07 59.7 80 45.0
THA.LOC104805213 Tarenaya hassleriana HOM05D003025 ORTHO05D003305 8.5e-07 59.7 63 52.4
Migut.L01161 Erythranthe guttata HOM05D003025 ORTHO05D003305 1.1e-06 59.3 199 31.7
Lj2g0017874 Lotus japonicus HOM05D003025 ORTHO05D003305 1.1e-06 59.3 61 54.1
Lalb_Chr04g0255461 Lupinus albus HOM05D003025 ORTHO05D003305 1.1e-06 59.3 90 46.7
PSO017G6048 Papaver somniferum HOM05D003025 ORTHO05D003305 1.1e-06 59.3 51 62.7
PSO782G5508 Papaver somniferum HOM05D003025 ORTHO05D003305 1.1e-06 59.3 161 32.9
Actinidia31928 Actinidia chinensis HOM05D003025 ORTHO05D003305 1.5e-06 58.9 58 63.8
CiPaw.06G095000 Carya illinoinensis HOM05D003025 ORTHO05D003305 1.5e-06 58.9 53 64.2
PSO063G1603 Papaver somniferum HOM05D003025 ORTHO05D003305 1.5e-06 58.9 251 29.1
PGR102G2660 Punica granatum HOM05D003025 ORTHO05D003305 1.5e-06 58.9 54 59.3
THA.LOC104824052 Tarenaya hassleriana HOM05D003025 ORTHO05D003305 1.5e-06 58.9 66 51.5
CDE10G0152 Ceratophyllum demersum HOM05D003025 ORTHO05D003305 1.9e-06 58.5 61 52.5
Phvul.003G280500 Phaseolus vulgaris HOM05D003025 ORTHO05D003305 1.9e-06 58.5 59 54.2
Rhsim12G0071300 Rhododendron simsii HOM05D003025 ORTHO05D003305 1.9e-06 58.5 63 55.6
TWI79G0747 Tripterygium wilfordii HOM05D003025 ORTHO05D003305 1.9e-06 58.5 119 39.5
Gorai.001G067100 Gossypium raimondii HOM05D003025 ORTHO05D003305 2.5e-06 58.2 64 54.7
Psat2g085960 Pisum sativum HOM05D003025 ORTHO05D003305 2.5e-06 58.2 54 63.0
Sed0026748 Sechium edule HOM05D025218 ORTHO05D025068 2.5e-06 58.2 60 53.3
CsaV3_5G033470 Cucumis sativus L. HOM05D003025 ORTHO05D003305 3.2e-06 57.8 46 67.4
FvH4_4g29290 Fragaria vesca HOM05D003025 ORTHO05D003305 3.2e-06 57.8 57 57.9
FAN17G1716 Fragaria x ananassa HOM05D003025 ORTHO05D003305 3.2e-06 57.8 57 57.9
FAN22G0063 Fragaria x ananassa HOM05D003025 ORTHO05D003305 3.2e-06 57.8 57 57.9
Gohir.A12G159500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 3.2e-06 57.8 53 62.3
Gohir.D12G162800 Gossypium hirsutum HOM05D003025 ORTHO05D003305 3.2e-06 57.8 53 62.3
Gorai.008G175400 Gossypium raimondii HOM05D003025 ORTHO05D003305 3.2e-06 57.8 53 62.3
Nn4g23540 Nelumbo nucifera HOM05D003025 ORTHO05D003305 3.2e-06 57.8 55 60.0
BcaC04g21446 Brassica carinata HOM05D003025 ORTHO05D003305 4.2e-06 57.4 115 40.9
C09p31660 Brassica napus HOM05D003025 ORTHO05D003305 4.2e-06 57.4 115 40.9
BolC9t56021H Brassica oleracea HOM05D003025 ORTHO05D003305 4.2e-06 57.4 115 40.9
FAN07G1412 Fragaria x ananassa HOM05D003025 ORTHO05D003305 4.2e-06 57.4 57 57.9
Gohir.A07G058700 Gossypium hirsutum HOM05D003025 ORTHO05D003305 4.2e-06 57.4 52 61.5
Gohir.D07G063600 Gossypium hirsutum HOM05D003025 ORTHO05D003305 4.2e-06 57.4 52 61.5
vmacro01298 Vaccinium macrocarpon HOM05D003025 ORTHO05D003305 4.2e-06 57.4 102 41.2
ATR0691G160 Amborella trichopoda HOM05D003025 ORTHO05D003305 5.5e-06 57.0 53 62.3
SGA_v2.0_scaffold287G47189 Striga asiatica HOM05D003025 ORTHO05D003305 5.5e-06 57.0 125 36.8
MSTRG.7727 Avicennia marina HOM05D003025 ORTHO05D003305 7.2e-06 56.6 66 54.5
C02p51790 Brassica napus HOM05D003025 ORTHO05D003305 7.2e-06 56.6 99 37.4
DCAR_030058 Daucus carota HOM05D003025 ORTHO05D003305 7.2e-06 56.6 59 59.3
Hma1.2p1_0060F.1_g032730 Hydrangea macrophylla HOM05D003025 ORTHO05D003305 7.2e-06 56.6 66 53.0
Oeu003749.3 Olea europaea HOM05D003025 ORTHO05D003305 7.2e-06 56.6 66 53.0
RcHm_v2.0_Chr4g0437341 Rosa chinensis HOM05D003025 ORTHO05D003305 7.2e-06 56.6 57 56.1
THA.LOC104801838 Tarenaya hassleriana HOM05D003025 ORTHO05D003305 9.4e-06 56.2 211 29.4


User provided reference genes

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