Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_23370 Physcomitrium patens HOM05D020496 ORTHO05D009197 2.0e-182 642.5 378 100.0
Pp3c13_23373 Physcomitrium patens HOM05D020496 ORTHO05D009197 2.0e-182 642.5 378 100.0
AagrBONN_evm.TU.Sc2ySwM_362.657 Anthoceros agrestis HOM05D020496 ORTHO05D009197 3.9e-16 90.1 151 39.1
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 2.1e-09 67.8 101 40.6
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 6.0e-09 66.2 147 34.7
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 7.8e-09 65.9 100 40.0
SMO358G0741 Selaginella moellendorffii HOM05D020496 ORTHO05D009197 7.8e-09 65.9 78 42.3
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 1.0e-08 65.5 99 40.4
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 1.3e-08 65.1 114 38.6
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 2.3e-08 64.3 147 32.7
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 2.3e-08 64.3 136 34.6
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 3.9e-08 63.5 56 55.4
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 3.9e-08 63.5 83 39.8
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 6.6e-08 62.8 89 40.4
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 6.6e-08 62.8 89 39.3
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 8.7e-08 62.4 100 36.0
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 1.9e-07 61.2 85 42.4
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 1.9e-07 61.2 103 35.0
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 2.5e-07 60.8 66 47.0
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 2.5e-07 60.8 66 47.0
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 2.5e-07 60.8 142 32.4
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 2.5e-07 60.8 70 45.7
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 3.3e-07 60.5 70 45.7
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 4.3e-07 60.1 146 33.6
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 4.3e-07 60.1 154 33.8
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 5.6e-07 59.7 79 40.5
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 5.6e-07 59.7 79 40.5
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 5.6e-07 59.7 135 34.1
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 7.3e-07 59.3 70 42.9
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 7.3e-07 59.3 80 38.8
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 7.3e-07 59.3 66 45.5
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 7.3e-07 59.3 56 55.4
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 7.3e-07 59.3 102 37.3
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 7.3e-07 59.3 79 39.2
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 7.3e-07 59.3 135 32.6
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 9.6e-07 58.9 66 47.0
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 9.6e-07 58.9 135 31.1
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 9.6e-07 58.9 150 32.0
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 9.6e-07 58.9 150 33.3
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 1.3e-06 58.5 112 34.8
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 1.3e-06 58.5 137 31.4
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 1.3e-06 58.5 137 31.4
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 1.3e-06 58.5 109 32.1
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 1.3e-06 58.5 150 31.3
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 1.6e-06 58.2 146 32.2
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 1.6e-06 58.2 142 31.7
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 1.6e-06 58.2 98 34.7
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 1.6e-06 58.2 84 38.1
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 2.1e-06 57.8 128 33.6
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 2.1e-06 57.8 66 43.9
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 2.1e-06 57.8 66 43.9
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 2.1e-06 57.8 79 41.8
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 2.1e-06 57.8 110 34.5
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 2.8e-06 57.4 100 35.0
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 4.8e-06 56.6 66 45.5
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 4.8e-06 56.6 121 33.1
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 4.8e-06 56.6 109 36.7
EL10Ac3g06402 Beta vulgaris HOM05D000789 ORTHO05D000897 6.2e-06 56.2 70 40.0
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 8.1e-06 55.8 151 29.1
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 8.1e-06 55.8 136 32.4


User provided reference genes

Program Settings