Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_23010 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.7e-174 615.1 298 100.0
Pp3c13_23030 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.7e-174 615.1 298 100.0
Pp3c5_17370 Physcomitrium patens HOM05D012277 ORTHO05D010483 4.8e-78 295.4 198 73.7
Pp3c2_27350 Physcomitrium patens HOM05D012277 ORTHO05D010483 6.3e-78 295.0 286 49.3
Pp3c7_19830 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.0e-76 290.0 291 48.8
Pp3c7_19850 Physcomitrium patens HOM05D012277 ORTHO05D010483 2.0e-76 290.0 291 48.8
Pp3c1_10460 Physcomitrium patens HOM05D012277 ORTHO05D010483 4.2e-66 255.8 294 43.9
Pp3c11_13210 Physcomitrium patens HOM05D012277 ORTHO05D010483 1.8e-61 240.4 288 42.4
ECA233G3586 Erigeron canadensis HOM05D000322 ORTHO05D000186 2.0e-15 87.4 238 26.5
ECA233G0047 Erigeron canadensis HOM05D000322 ORTHO05D000186 9.8e-15 85.1 245 27.3
Pp3c17_11500 Physcomitrium patens HOM05D012277 ORTHO05D010483 9.8e-15 85.1 137 38.0
SMO141G0292 Selaginella moellendorffii HOM05D000322 ORTHO05D010483 6.4e-14 82.4 125 37.6
HPP92_010019 Vanilla planifolia HOM05D000197 ORTHO05D000114 9.2e-13 78.6 134 33.6
Mapoly0151s0036 Marchantia polymorpha HOM05D000322 ORTHO05D000186 1.6e-12 77.8 135 29.6
Pp3c10_2750 Physcomitrium patens HOM05D012277 ORTHO05D010483 3.5e-12 76.6 103 33.0
Pp3c10_2760 Physcomitrium patens HOM05D012277 ORTHO05D010483 3.5e-12 76.6 103 33.0
HPP92_015289 Vanilla planifolia HOM05D000197 ORTHO05D000114 3.5e-12 76.6 134 32.8
CiPaw.05G148600 Carya illinoinensis HOM05D000197 ORTHO05D000114 6.0e-12 75.9 134 33.6
QL06p011029 Quercus lobata HOM05D000322 ORTHO05D000186 6.0e-12 75.9 242 25.6
Peaxi162Scf00059g01918 Petunia axillaris HOM05D008409 ORTHO05D010483 1.3e-11 74.7 140 35.7
Cpa.g.sc258.3 Carica papaya HOM05D000197 ORTHO05D000114 2.3e-11 73.9 127 29.9
Cfa015466 Carpinus fangiana HOM05D000322 ORTHO05D000186 3.9e-11 73.2 228 27.2
CAN.G578.4 Capsicum annuum HOM05D008409 ORTHO05D010483 5.1e-11 72.8 131 34.4
PGSC0003DMG400013143 Solanum tuberosum HOM05D008409 ORTHO05D010483 6.6e-11 72.4 129 33.3
Aqoxy3G00934 Aquilegia oxysepala HOM05D000197 ORTHO05D000114 8.6e-11 72.0 112 33.9
CiPaw.06G073000 Carya illinoinensis HOM05D000197 ORTHO05D000114 8.6e-11 72.0 113 32.7
Mapoly0040s0095 Marchantia polymorpha HOM05D012277 ORTHO05D000114 8.6e-11 72.0 148 33.1
AUR62005328 Chenopodium quinoa HOM05D000197 ORTHO05D000114 1.5e-10 71.2 115 30.4
AUR62013976 Chenopodium quinoa HOM05D000197 ORTHO05D000114 2.5e-10 70.5 115 30.4
Ca_04619_v3 Cicer arietinum L. HOM05D000197 ORTHO05D000114 3.3e-10 70.1 110 31.8
TPR.G25548 Trifolium pratense HOM05D000197 ORTHO05D000114 5.6e-10 69.3 106 31.1
CSS0039522 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 9.5e-10 68.6 117 29.9
Psat4g125760 Pisum sativum HOM05D000197 ORTHO05D000114 1.2e-09 68.2 127 29.1
MD16G1160000 Malus domestica HOM05D000322 ORTHO05D000186 1.6e-09 67.8 216 25.0
SEGI_04347 Sequoiadendron giganteum HOM05D000197 ORTHO05D000114 1.6e-09 67.8 150 29.3
MSTRG.611 Avicennia marina HOM05D000197 ORTHO05D000114 2.1e-09 67.4 117 26.5
Dinv24891 Davidia involucrata HOM05D000197 ORTHO05D000114 2.1e-09 67.4 113 28.3
Peaxi162Scf00421g00328 Petunia axillaris HOM05D000197 ORTHO05D000114 2.1e-09 67.4 130 27.7
Sabra10G0068600 Salix brachista HOM05D000197 ORTHO05D000114 2.1e-09 67.4 110 31.8
AagrBONN_evm.TU.Sc2ySwM_228.4478 Anthoceros agrestis HOM05D008409 ORTHO05D010483 3.6e-09 66.6 149 30.9
Mapoly0131s0013 Marchantia polymorpha HOM05D008409 ORTHO05D010483 3.6e-09 66.6 141 34.8
CANSAT01G0021 Cannabis sativa HOM05D000197 ORTHO05D000114 4.7e-09 66.2 143 30.1
PSO017G5859 Papaver somniferum HOM05D000197 ORTHO05D000114 4.7e-09 66.2 112 29.5
QL08p038864 Quercus lobata HOM05D008409 ORTHO05D010483 4.7e-09 66.2 141 33.3
Ah.03g132470 Amaranthus hybridus HOM05D000197 ORTHO05D000114 6.2e-09 65.9 133 26.3
HanXRQChr03g0090301 Helianthus annuus HOM05D000322 ORTHO05D000186 6.2e-09 65.9 219 26.5
Mapoly0034s0105 Marchantia polymorpha HOM05D000322 ORTHO05D000186 6.2e-09 65.9 145 31.7
Nitab4.5_0005555g0020 Nicotiana tabacum HOM05D000197 ORTHO05D000114 6.2e-09 65.9 130 27.7
PSO478G4376 Papaver somniferum HOM05D000197 ORTHO05D000114 6.2e-09 65.9 112 29.5
SMO332G0032 Selaginella moellendorffii HOM05D008409 ORTHO05D000186 6.2e-09 65.9 122 29.5
EL10Ac6g13631 Beta vulgaris HOM05D000197 ORTHO05D000114 8.1e-09 65.5 116 29.3
Ca_22763_v3 Cicer arietinum L. HOM05D000197 ORTHO05D000114 8.1e-09 65.5 116 27.6
Thecc.02G180200 Theobroma cacao HOM05D008409 ORTHO05D010483 8.1e-09 65.5 133 30.8
Aqoxy3G00935 Aquilegia oxysepala HOM05D000197 ORTHO05D000114 1.1e-08 65.1 129 28.7
Sopen10g004190 Solanum pennellii HOM05D008409 ORTHO05D010483 1.1e-08 65.1 135 31.9
CAN.G205.30 Capsicum annuum HOM05D000197 ORTHO05D000114 1.4e-08 64.7 147 28.6
COL.COLO4_21710 Corchorus olitorius HOM05D000322 ORTHO05D000186 1.4e-08 64.7 110 32.7
vmacro16272 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 1.4e-08 64.7 114 28.9
HanXRQChr08g0235011 Helianthus annuus HOM05D000322 ORTHO05D000186 1.8e-08 64.3 240 22.5
Lalb_Chr16g0382431 Lupinus albus HOM05D000197 ORTHO05D000114 1.8e-08 64.3 110 30.0
Mapoly0131s0015 Marchantia polymorpha HOM05D012277 ORTHO05D000114 1.8e-08 64.3 124 30.6
ClCG06G004840 Citrullus lanatus HOM05D000322 ORTHO05D000186 2.3e-08 63.9 207 28.0
TAR627G0101 Trochodendron aralioides HOM05D008409 ORTHO05D010483 2.3e-08 63.9 139 30.9
ATR0737G133 Amborella trichopoda HOM05D008409 ORTHO05D010483 3.1e-08 63.5 121 33.1
Solyc10g008330.4 Solanum lycopersicum HOM05D008409 ORTHO05D010483 3.1e-08 63.5 135 31.1
Ciclev10017070m.g Citrus clementina HOM05D008409 ORTHO05D010483 4.0e-08 63.2 133 30.8
Nitab4.5_0009473g0020 Nicotiana tabacum HOM05D008409 ORTHO05D010483 5.2e-08 62.8 127 33.9
Nitab4.5_0001474g0070 Nicotiana tabacum HOM05D000197 ORTHO05D000114 6.8e-08 62.4 130 27.7
Pp3c8_12660 Physcomitrium patens HOM05D008409 ORTHO05D010483 6.8e-08 62.4 144 29.9
Aqoxy1G02429 Aquilegia oxysepala HOM05D008409 ORTHO05D010483 8.9e-08 62.0 141 27.7
Cfa009126 Carpinus fangiana HOM05D000197 ORTHO05D000114 8.9e-08 62.0 134 27.6
Mapoly0063s0020 Marchantia polymorpha HOM05D001593 ORTHO05D010032 8.9e-08 62.0 139 29.5
unitig_22.g6474 Utricularia gibba HOM05D000197 ORTHO05D000114 8.9e-08 62.0 148 23.6
Haze_12156 Corylus avellana HOM05D000197 ORTHO05D000114 1.2e-07 61.6 113 26.5
Atru.chr6.2992 Acer truncatum HOM05D008409 ORTHO05D010483 1.5e-07 61.2 130 31.5
ClCG07G002880 Citrullus lanatus HOM05D008409 ORTHO05D010483 1.5e-07 61.2 132 30.3
Mapoly0040s0030 Marchantia polymorpha HOM05D000322 ORTHO05D000186 1.5e-07 61.2 143 31.5
Mapoly0063s0024 Marchantia polymorpha HOM05D008409 ORTHO05D010032 1.5e-07 61.2 71 40.8
Mapoly0100s0057 Marchantia polymorpha HOM05D008409 ORTHO05D010483 1.5e-07 61.2 144 31.2
PGR142G1945 Punica granatum HOM05D008409 ORTHO05D010483 1.5e-07 61.2 122 31.1
MELO3C018733.2 Cucumis melo HOM05D008409 ORTHO05D010483 2.0e-07 60.8 132 30.3
Sed0018099 Sechium edule HOM05D008409 ORTHO05D010483 2.0e-07 60.8 132 30.3
Lsat_1_v5_gn_3_48941 Lactuca sativa HOM05D000197 ORTHO05D000114 2.6e-07 60.5 113 24.8
Gohir.D04G143000 Gossypium hirsutum HOM05D008409 ORTHO05D010483 3.4e-07 60.1 141 29.8
Potri.013G131000 Populus trichocarpa HOM05D008409 ORTHO05D010483 3.4e-07 60.1 140 31.4
PGSC0003DMG400004131 Solanum tuberosum HOM05D000197 ORTHO05D000114 3.4e-07 60.1 147 25.9
CsaV3_7G004460 Cucumis sativus L. HOM05D008409 ORTHO05D010483 4.4e-07 59.7 132 28.8
Ca_01893_v3 Cicer arietinum L. HOM05D000322 ORTHO05D000186 5.8e-07 59.3 88 33.0
Gohir.A02G053000 Gossypium hirsutum HOM05D000322 ORTHO05D000186 5.8e-07 59.3 133 29.3
Sed0020136 Sechium edule HOM05D000197 ORTHO05D000114 5.8e-07 59.3 115 28.7
ECA246G1203 Erigeron canadensis HOM05D000226 ORTHO05D000114 7.6e-07 58.9 110 23.6
TWI73G0515 Tripterygium wilfordii HOM05D000322 ORTHO05D000186 7.6e-07 58.9 131 31.3
Ca_01900_v3 Cicer arietinum L. HOM05D000322 ORTHO05D000186 9.9e-07 58.5 88 33.0
Mapoly0063s0019 Marchantia polymorpha HOM05D001593 ORTHO05D010032 9.9e-07 58.5 132 31.1
Sabra13G0110600 Salix brachista HOM05D008409 ORTHO05D010483 9.9e-07 58.5 140 29.3
SEGI_16799 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 9.9e-07 58.5 146 29.5
CsaV3_5G031770 Cucumis sativus L. HOM05D000197 ORTHO05D000114 1.3e-06 58.2 115 27.0
Manes.05G090000 Manihot esculenta HOM05D000197 ORTHO05D000114 1.3e-06 58.2 137 27.0
Mapoly0063s0018 Marchantia polymorpha HOM05D001593 ORTHO05D002007 1.3e-06 58.2 127 29.9
Nn1g09182 Nelumbo nucifera HOM05D000381 ORTHO05D001117 1.3e-06 58.2 111 29.7
SMO141G0029 Selaginella moellendorffii HOM05D000322 ORTHO05D000186 1.3e-06 58.2 120 30.0
Nn1g06548 Nelumbo nucifera HOM05D008409 ORTHO05D010483 1.7e-06 57.8 125 33.6
SEGI_00232 Sequoiadendron giganteum HOM05D008409 ORTHO05D010483 1.7e-06 57.8 123 29.3
Solyc05g005865.1 Solanum lycopersicum HOM05D000197 ORTHO05D000114 1.7e-06 57.8 129 26.4
C07p20100 Brassica napus HOM05D000197 ORTHO05D000114 2.2e-06 57.4 149 25.5
BolC7t42531H Brassica oleracea HOM05D000197 ORTHO05D000114 2.2e-06 57.4 149 25.5
Cc11_g14370 Coffea canephora HOM05D000197 ORTHO05D000114 2.2e-06 57.4 134 26.1
Duzib151G0924 Durio zibethinus HOM05D000322 ORTHO05D000186 2.2e-06 57.4 131 26.0
CiPaw.04G126300 Carya illinoinensis HOM05D008409 ORTHO05D010483 2.9e-06 57.0 132 28.8
MELO3C012016.2 Cucumis melo HOM05D000197 ORTHO05D000114 2.9e-06 57.0 115 27.0
HanXRQChr12g0372961 Helianthus annuus HOM05D000322 ORTHO05D000186 2.9e-06 57.0 131 30.5
SalBow2G0185 Salvia bowleyana HOM05D000197 ORTHO05D000114 2.9e-06 57.0 106 26.4
SalBow2G1202 Salvia bowleyana HOM05D000197 ORTHO05D000114 2.9e-06 57.0 106 26.4
Sopen05g001890 Solanum pennellii HOM05D000197 ORTHO05D000114 2.9e-06 57.0 129 26.4
vmacro08086 Vaccinium macrocarpon HOM05D000322 ORTHO05D000186 2.9e-06 57.0 131 31.3
Haze_13167 Corylus avellana HOM05D008409 ORTHO05D010483 3.8e-06 56.6 122 31.1
Duzib151G0603 Durio zibethinus HOM05D000322 ORTHO05D000186 3.8e-06 56.6 131 26.7
Gorai.005G064900 Gossypium raimondii HOM05D000322 ORTHO05D000186 3.8e-06 56.6 129 28.7
SEGI_04275 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 3.8e-06 56.6 155 28.4
SEGI_35359 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 3.8e-06 56.6 155 27.7
HanXRQChr12g0372951 Helianthus annuus HOM05D000322 ORTHO05D000186 4.9e-06 56.2 131 30.5
SMO367G1012 Selaginella moellendorffii HOM05D000322 ORTHO05D000114 4.9e-06 56.2 120 30.8
arahy.Tifrunner.gnm1.ann1.P1AGI1 Arachis hypogaea HOM05D000322 ORTHO05D000186 6.4e-06 55.8 88 33.0
Gohir.D02G057268 Gossypium hirsutum HOM05D000322 ORTHO05D000186 6.4e-06 55.8 111 29.7
Gorai.005G064000 Gossypium raimondii HOM05D000322 ORTHO05D000186 6.4e-06 55.8 111 29.7
SEGI_28786 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 6.4e-06 55.8 155 27.7
Actinidia15014 Actinidia chinensis HOM05D000197 ORTHO05D000114 8.4e-06 55.5 118 25.4
Gohir.A02G052700 Gossypium hirsutum HOM05D000322 ORTHO05D000186 8.4e-06 55.5 129 27.9
Gohir.D02G056650 Gossypium hirsutum HOM05D000322 ORTHO05D000186 8.4e-06 55.5 111 29.7
Manes.12G089218 Manihot esculenta HOM05D008409 ORTHO05D010483 8.4e-06 55.5 127 30.7
SEGI_13418 Sequoiadendron giganteum HOM05D000322 ORTHO05D000186 8.4e-06 55.5 148 29.1


User provided reference genes

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