Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_16650 Physcomitrium patens HOM05D011001 ORTHO05D014251 1.1e-63 246.5 123 100.0
Pp3c15_6480 Physcomitrium patens HOM05D009535 ORTHO05D011278 2.2e-29 132.5 114 57.9
Pp3c10_17990 Physcomitrium patens HOM05D009535 ORTHO05D011278 4.8e-24 114.8 105 55.2
Pp3c27_3990 Physcomitrium patens HOM05D011001 ORTHO05D014251 1.4e-15 86.7 74 54.1
Pp3c14_3640 Physcomitrium patens HOM05D011001 ORTHO05D014251 2.4e-15 85.9 64 62.5
Pp3c22_3600 Physcomitrium patens HOM05D011001 ORTHO05D014251 2.6e-14 82.4 93 49.5
Pp3c21_9670 Physcomitrium patens HOM05D011001 ORTHO05D014251 3.2e-12 75.5 72 56.9
Pp3c10_6200 Physcomitrium patens HOM05D009535 ORTHO05D011278 1.2e-11 73.6 116 39.7
Pp3c11_8090 Physcomitrium patens HOM05D011001 ORTHO05D014251 1.6e-11 73.2 54 63.0
Pp3c20_20591 Physcomitrium patens HOM05D011001 ORTHO05D011278 2.1e-11 72.8 119 38.7
Pp3c7_23190 Physcomitrium patens HOM05D011001 ORTHO05D014251 6.1e-11 71.2 52 65.4
Mapoly0025s0067 Marchantia polymorpha HOM05D000465 ORTHO05D000301 3.0e-10 68.9 77 45.5
Mapoly0060s0038 Marchantia polymorpha HOM05D000465 ORTHO05D000301 3.0e-10 68.9 76 46.1
Mapoly0082s0022 Marchantia polymorpha HOM05D000465 ORTHO05D000301 3.0e-10 68.9 77 45.5
Mapoly0001s0002 Marchantia polymorpha HOM05D000465 ORTHO05D000301 5.1e-10 68.2 76 46.1
Mapoly2384s0001 Marchantia polymorpha HOM05D000465 ORTHO05D000301 5.1e-10 68.2 76 43.4
Mapoly0118s0003 Marchantia polymorpha HOM05D000465 ORTHO05D000301 6.7e-10 67.8 76 44.7
Mapoly0006s0235 Marchantia polymorpha HOM05D000465 ORTHO05D000301 8.8e-10 67.4 76 44.7
Mapoly0020s0098 Marchantia polymorpha HOM05D000465 ORTHO05D000301 8.8e-10 67.4 78 43.6
Mapoly0030s0149 Marchantia polymorpha HOM05D000465 ORTHO05D000301 8.8e-10 67.4 78 43.6
Mapoly0016s0163 Marchantia polymorpha HOM05D000465 ORTHO05D000301 1.1e-09 67.0 76 43.4
Mapoly0029s0086 Marchantia polymorpha HOM05D000465 ORTHO05D000301 1.1e-09 67.0 76 43.4
Mapoly0077s0053 Marchantia polymorpha HOM05D000465 ORTHO05D000301 1.1e-09 67.0 76 43.4
Mapoly0079s0069 Marchantia polymorpha HOM05D000465 ORTHO05D000301 2.0e-09 66.2 76 44.7
Pp3c1_31430 Physcomitrium patens HOM05D011001 ORTHO05D014251 2.0e-09 66.2 65 47.7
Pp3c7_25170 Physcomitrium patens HOM05D011001 ORTHO05D014251 2.6e-09 65.9 72 52.8
Mapoly1647s0001 Marchantia polymorpha HOM05D000465 ORTHO05D000301 3.3e-09 65.5 76 42.1
Mapoly0042s0001 Marchantia polymorpha HOM05D000465 ORTHO05D000301 4.4e-09 65.1 76 43.4
Mapoly0055s0004 Marchantia polymorpha HOM05D000465 ORTHO05D000301 9.7e-09 63.9 77 42.9
Mapoly0073s0034 Marchantia polymorpha HOM05D000465 ORTHO05D000301 9.7e-09 63.9 76 44.7
Pp3c22_8900 Physcomitrium patens HOM05D009535 ORTHO05D011278 9.7e-09 63.9 47 63.8
Pp3c5_590 Physcomitrium patens HOM05D011001 ORTHO05D014251 1.3e-08 63.5 61 55.7
Pp3c7_3390 Physcomitrium patens HOM05D009535 ORTHO05D011278 1.3e-08 63.5 47 63.8
Mapoly0100s0063 Marchantia polymorpha HOM05D000465 ORTHO05D000301 1.7e-08 63.2 75 42.7
Pp3c24_20860 Physcomitrium patens HOM05D009535 ORTHO05D011278 1.7e-08 63.2 52 55.8
Pp3c11_8100 Physcomitrium patens HOM05D009535 ORTHO05D011278 2.2e-08 62.8 48 66.7
Mapoly0001s0159 Marchantia polymorpha HOM05D000465 ORTHO05D000301 2.8e-08 62.4 75 40.0
Mapoly0068s0107 Marchantia polymorpha HOM05D000465 ORTHO05D000301 2.8e-08 62.4 76 42.1
Mapoly0018s0005 Marchantia polymorpha HOM05D000465 ORTHO05D000301 3.7e-08 62.0 76 40.8
Mapoly0028s0044 Marchantia polymorpha HOM05D000465 ORTHO05D000301 4.8e-08 61.6 78 39.7
Mapoly0007s0018 Marchantia polymorpha HOM05D000465 ORTHO05D000301 6.3e-08 61.2 76 42.1
Pp3c21_3200 Physcomitrium patens HOM05D011001 ORTHO05D014251 6.3e-08 61.2 62 51.6
Pp3c12_1670 Physcomitrium patens HOM05D009535 ORTHO05D011278 8.2e-08 60.8 47 57.4
Mapoly0155s0021 Marchantia polymorpha HOM05D000465 ORTHO05D000301 1.1e-07 60.5 76 40.8
Pp3c16_16020 Physcomitrium patens HOM05D009535 ORTHO05D011278 1.1e-07 60.5 43 62.8
Mapoly0198s0007 Marchantia polymorpha HOM05D000465 ORTHO05D000301 1.8e-07 59.7 100 33.0
Mapoly0055s0127 Marchantia polymorpha HOM05D000465 ORTHO05D000301 2.4e-07 59.3 98 36.7
Pp3c1_29690 Physcomitrium patens HOM05D011001 ORTHO05D014251 2.4e-07 59.3 52 53.8
AagrBONN_evm.TU.Sc2ySwM_340.724 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.3e-07 58.2 73 42.5
Pp3c7_12410 Physcomitrium patens HOM05D011001 ORTHO05D014251 5.3e-07 58.2 59 50.8
Pp3s466_20 Physcomitrium patens HOM05D000465 ORTHO05D014251 9.1e-07 57.4 91 39.6
AagrBONN_evm.TU.Sc2ySwM_228.5868 Anthoceros agrestis HOM05D000465 ORTHO05D000301 1.2e-06 57.0 71 40.8
Pp3c20_9150 Physcomitrium patens HOM05D009535 ORTHO05D011278 1.2e-06 57.0 45 60.0
AagrBONN_evm.TU.Sc2ySwM_228.4205 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.6e-06 55.8 71 40.8
AagrBONN_evm.TU.Sc2ySwM_340.1664 Anthoceros agrestis HOM05D000465 ORTHO05D000301 2.6e-06 55.8 71 42.3
AagrBONN_evm.TU.Sc2ySwM_228.3942 Anthoceros agrestis HOM05D000465 ORTHO05D000301 5.9e-06 54.7 71 43.7


User provided reference genes

Program Settings