Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c13_1370 Physcomitrium patens HOM05D001295 ORTHO05D005319 1.0e-190 669.8 332 100.0
AagrBONN_evm.TU.Sc2ySwM_228.190 Anthoceros agrestis HOM05D001295 ORTHO05D005319 1.6e-58 230.7 319 41.4
Mapoly0209s0009 Marchantia polymorpha HOM05D001295 ORTHO05D005319 4.7e-58 229.2 313 41.9
Hund12401 Selenicereus undatus HOM05D001295 ORTHO05D005319 1.0e-52 211.5 325 40.3
Nn1g09559 Nelumbo nucifera HOM05D001295 ORTHO05D005319 2.3e-52 210.3 233 45.5
Dinv05087 Davidia involucrata HOM05D001295 ORTHO05D005319 1.6e-50 204.1 304 39.8
Manes.11G126000 Manihot esculenta HOM05D001295 ORTHO05D005319 2.1e-50 203.8 276 39.5
PSO017G5265 Papaver somniferum HOM05D001295 ORTHO05D005319 8.0e-50 201.8 321 38.3
CSS0045865 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 1.8e-49 200.7 268 44.0
CSS0006680 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 2.3e-49 200.3 268 44.0
Thecc.04G173300 Theobroma cacao HOM05D001295 ORTHO05D005319 4.0e-49 199.5 276 40.6
PGSC0003DMG400026920 Solanum tuberosum HOM05D001295 ORTHO05D005319 5.2e-49 199.1 293 38.6
Sopen06g029480 Solanum pennellii HOM05D001295 ORTHO05D005319 2.0e-48 197.2 293 38.6
CAN.G65.159 Capsicum annuum HOM05D001295 ORTHO05D005319 2.6e-48 196.8 293 37.9
Oeu020777.1 Olea europaea HOM05D001295 ORTHO05D005319 4.4e-48 196.1 292 41.1
GSVIVG01004102001 Vitis vinifera HOM05D001295 ORTHO05D005319 4.4e-48 196.1 311 39.2
PSO837G0039 Papaver somniferum HOM05D001295 ORTHO05D005319 5.8e-48 195.7 328 37.2
Peaxi162Scf00180g00045 Petunia axillaris HOM05D001295 ORTHO05D005319 1.7e-47 194.1 293 38.6
Actinidia34573 Actinidia chinensis HOM05D001295 ORTHO05D005319 4.9e-47 192.6 297 41.8
Psat5g290520 Pisum sativum HOM05D001295 ORTHO05D005319 4.9e-47 192.6 297 38.0
COL.COLO4_09274 Corchorus olitorius HOM05D001295 ORTHO05D005319 8.3e-47 191.8 233 43.8
Potri.007G132100 Populus trichocarpa HOM05D001295 ORTHO05D005319 1.1e-46 191.4 276 38.8
TAR633G1947 Trochodendron aralioides HOM05D001295 ORTHO05D005319 4.1e-46 189.5 309 38.8
Solyc06g073130.4 Solanum lycopersicum HOM05D001295 ORTHO05D005319 5.4e-46 189.1 312 35.6
TPR.G6512 Trifolium pratense HOM05D001295 ORTHO05D005319 5.4e-46 189.1 298 37.9
HanXRQChr13g0419451 Helianthus annuus HOM05D001295 ORTHO05D005319 9.2e-46 188.3 292 38.4
QL10p051666 Quercus lobata HOM05D001295 ORTHO05D005319 1.2e-45 188.0 215 44.2
QL10p051312 Quercus lobata HOM05D001295 ORTHO05D005319 2.1e-45 187.2 273 37.7
Cc03_g12290 Coffea canephora HOM05D001295 ORTHO05D005319 2.7e-45 186.8 292 39.4
Lsat_1_v5_gn_3_110661 Lactuca sativa HOM05D001295 ORTHO05D005319 2.7e-45 186.8 301 37.9
ECA240G1882 Erigeron canadensis HOM05D001295 ORTHO05D005319 1.7e-44 184.1 194 47.9
ATR0743G262 Amborella trichopoda HOM05D001295 ORTHO05D005319 2.3e-44 183.7 319 36.7
AUR62002356 Chenopodium quinoa HOM05D001295 ORTHO05D005319 3.0e-44 183.3 323 37.2
Atru.chr4.1272 Acer truncatum HOM05D001295 ORTHO05D005319 3.9e-44 183.0 284 39.4
Phvul.005G154600 Phaseolus vulgaris HOM05D001295 ORTHO05D005319 3.9e-44 183.0 290 38.3
Sc21g0002910 Simmondsia chinensis HOM05D001295 ORTHO05D005319 3.9e-44 183.0 298 37.6
Ca_01246_v3 Cicer arietinum L. HOM05D001295 ORTHO05D005319 8.6e-44 181.8 299 38.5
Gorai.005G126300 Gossypium raimondii HOM05D001295 ORTHO05D005319 1.9e-43 180.6 239 41.8
VMungo1080G0958 Vigna mungo HOM05D001295 ORTHO05D005319 2.5e-43 180.3 291 39.2
Nitab4.5_0002553g0060 Nicotiana tabacum HOM05D001295 ORTHO05D005319 3.3e-43 179.9 335 34.0
SalBow8G2942 Salvia bowleyana HOM05D001295 ORTHO05D005319 4.3e-43 179.5 318 35.2
MSTRG.4291 Avicennia marina HOM05D001295 ORTHO05D005319 5.6e-43 179.1 301 38.9
Glyma.15G028500 Glycine max HOM05D001295 ORTHO05D005319 1.2e-42 177.9 302 38.1
Aqoxy5G00377 Aquilegia oxysepala HOM05D001295 ORTHO05D005319 1.6e-42 177.6 226 41.2
CiPaw.01G095500 Carya illinoinensis HOM05D001295 ORTHO05D005319 2.1e-42 177.2 276 38.0
Lj3g0016601 Lotus japonicus HOM05D001295 ORTHO05D005319 2.8e-42 176.8 289 37.7
MD04G1046100 Malus domestica HOM05D001295 ORTHO05D005319 2.8e-42 176.8 263 39.9
Medtr2g099125 Medicago truncatula HOM05D001295 ORTHO05D005319 8.1e-42 175.3 287 37.3
Lalb_Chr14g0372571 Lupinus albus HOM05D001295 ORTHO05D005319 1.1e-41 174.9 285 35.1
PGR142G2463 Punica granatum HOM05D001295 ORTHO05D005319 4.0e-41 172.9 278 36.3
arahy.Tifrunner.gnm1.ann1.982DXJ Arachis hypogaea HOM05D001295 ORTHO05D005319 6.8e-41 172.2 236 39.0
Prupe.1G199500 Prunus persica HOM05D001295 ORTHO05D005319 2.0e-40 170.6 272 36.8
HPP92_007597 Vanilla planifolia HOM05D001295 ORTHO05D005319 2.6e-40 170.2 309 35.0
Nitab4.5_0001586g0250 Nicotiana tabacum HOM05D001295 ORTHO05D005319 4.4e-40 169.5 238 38.2
Carub.0004s2592 Capsella rubella HOM05D001295 ORTHO05D005319 7.5e-40 168.7 276 36.6
Sed0017723 Sechium edule HOM05D001295 ORTHO05D005319 9.9e-40 168.3 293 33.8
Migut.G01307 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.3e-39 167.9 309 35.0
DCAR_028425 Daucus carota HOM05D001295 ORTHO05D005319 2.9e-39 166.8 270 37.4
THA.LOC104803837 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 8.3e-39 165.2 235 36.6
Eucgr.H00340 Eucalyptus grandis HOM05D001295 ORTHO05D005319 1.9e-38 164.1 308 36.0
Lalb_Chr22g0352051 Lupinus albus HOM05D001295 ORTHO05D005319 2.4e-38 163.7 217 39.2
CARHR138550 Cardamine hirsuta HOM05D001295 ORTHO05D005319 1.6e-37 161.0 271 34.7
COL.COLO4_21796 Corchorus olitorius HOM05D001295 ORTHO05D005319 1.6e-37 161.0 221 41.6
Thhalv10001762m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 1.7e-36 157.5 273 32.6
EL10Ac3g06020 Beta vulgaris HOM05D001295 ORTHO05D005319 3.9e-36 156.4 302 35.8
arahy.Tifrunner.gnm1.ann1.CA0DYB Arachis hypogaea HOM05D001295 ORTHO05D005319 8.6e-36 155.2 259 35.5
Zm00001eb064040 Zea mays HOM05D001295 ORTHO05D005319 8.6e-36 155.2 274 35.8
Sp4g25550 Schrenkiella parvula HOM05D001295 ORTHO05D005319 4.3e-35 152.9 273 32.2
Aa31LG1G25200 Aethionema arabicum HOM05D001295 ORTHO05D005319 5.6e-35 152.5 290 32.8
AUR62023829 Chenopodium quinoa HOM05D001295 ORTHO05D005319 7.3e-35 152.1 286 36.7
Sed0000422 Sechium edule HOM05D001295 ORTHO05D005319 1.2e-34 151.4 215 39.1
arahy.Tifrunner.gnm1.ann1.1HI5HP Arachis hypogaea HOM05D001295 ORTHO05D005319 2.8e-34 150.2 259 35.1
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 2.8e-34 150.2 290 31.4
Duzib212G0222 Durio zibethinus HOM05D001295 ORTHO05D005319 2.8e-34 150.2 229 38.0
Gohir.D02G111400 Gossypium hirsutum HOM05D001295 ORTHO05D005319 3.6e-34 149.8 250 37.2
AL4G42200 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 4.7e-34 149.4 231 35.9
BcaB02g08938 Brassica carinata HOM05D001295 ORTHO05D005319 1.4e-33 147.9 290 32.1
Cfa015203 Carpinus fangiana HOM05D001295 ORTHO05D005319 1.8e-33 147.5 238 36.1
Ciclev10021666m.g Citrus clementina HOM05D001295 ORTHO05D005319 1.8e-33 147.5 205 38.5
A05p03770 Brassica napus HOM05D001295 ORTHO05D005319 4.0e-33 146.4 274 32.5
BraA05t19365Z Brassica rapa HOM05D001295 ORTHO05D005319 4.0e-33 146.4 274 33.6
ClCG06G001010 Citrullus lanatus HOM05D001295 ORTHO05D005319 5.2e-33 146.0 293 31.4
TWI15G0408 Tripterygium wilfordii HOM05D001295 ORTHO05D005319 1.2e-32 144.8 209 38.8
AT3G03320 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 1.3e-31 141.4 192 39.6
Rhsim09G0020700 Rhododendron simsii HOM05D001295 ORTHO05D005319 1.1e-30 138.3 304 32.9
BcaC02g12392 Brassica carinata HOM05D001295 ORTHO05D005319 1.4e-30 137.9 275 31.6
C04p04470 Brassica napus HOM05D001295 ORTHO05D005319 1.4e-30 137.9 275 31.6
BolC4t22080H Brassica oleracea HOM05D001295 ORTHO05D005319 2.4e-30 137.1 275 31.6
Thhalv10021391m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 3.2e-30 136.7 199 38.7
Gohir.D08G098300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 3.2e-30 136.7 200 39.5
Gorai.004G105900 Gossypium raimondii HOM05D001295 ORTHO05D005319 3.2e-30 136.7 200 39.5
Migut.G01305 Erythranthe guttata HOM05D001295 ORTHO05D005319 4.2e-30 136.3 318 31.1
Gohir.A02G093300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 7.1e-30 135.6 196 38.8
AL3G12950 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 9.2e-30 135.2 142 47.9
Sabra07G0107500 Salix brachista HOM05D001295 ORTHO05D005319 9.2e-30 135.2 276 34.4
Ciclev10021418m.g Citrus clementina HOM05D001295 ORTHO05D005319 1.6e-29 134.4 273 31.5
MELO3C022439.2 Cucumis melo HOM05D001295 ORTHO05D005319 1.6e-29 134.4 301 30.2
Manes.04G047700 Manihot esculenta HOM05D001295 ORTHO05D005319 2.1e-29 134.0 204 38.2
SMO337G0100 Selaginella moellendorffii HOM05D001295 ORTHO05D005319 2.1e-29 134.0 161 45.3
Lj3C135G1 Lonicera japonica HOM05D001295 ORTHO05D005319 3.5e-29 133.3 162 42.6
Carub.0003s0249 Capsella rubella HOM05D001295 ORTHO05D005319 6.0e-29 132.5 164 41.5
RcHm_v2.0_Chr6g0292651 Rosa chinensis HOM05D001295 ORTHO05D005319 1.0e-28 131.7 216 38.0
Migut.G01326 Erythranthe guttata HOM05D001295 ORTHO05D005319 3.0e-28 130.2 186 41.4
Sabra07G0119100 Salix brachista HOM05D001295 ORTHO05D005319 1.9e-27 127.5 223 32.3
Sabra07G0119200 Salix brachista HOM05D001295 ORTHO05D005319 3.3e-27 126.7 198 34.3
CARHR077360 Cardamine hirsuta HOM05D001295 ORTHO05D005319 5.6e-27 125.9 142 43.7
Sp3g02350 Schrenkiella parvula HOM05D001295 ORTHO05D005319 5.6e-27 125.9 210 36.2
vmacro00676 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 5.6e-27 125.9 131 50.4
ClCG07G011710 Citrullus lanatus HOM05D001295 ORTHO05D005319 9.6e-27 125.2 181 37.0
Sabra07G0119300 Salix brachista HOM05D001295 ORTHO05D005319 1.6e-26 124.4 188 39.9
BraA05t23124Z Brassica rapa HOM05D001295 ORTHO05D005319 2.1e-26 124.0 153 41.2
THA.LOC104820845 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 2.8e-26 123.6 140 45.0
BcaC05g30303 Brassica carinata HOM05D001295 ORTHO05D005319 3.6e-26 123.2 165 40.0
A05p43870 Brassica napus HOM05D001295 ORTHO05D005319 3.6e-26 123.2 153 41.2
Hma1.2p1_0401F.1_g144800 Hydrangea macrophylla HOM05D001295 ORTHO05D005319 6.2e-26 122.5 125 50.4
RhsimUnG0137700 Rhododendron simsii HOM05D001295 ORTHO05D005319 1.1e-25 121.7 135 48.9
FAN27G1301 Fragaria x ananassa HOM05D001295 ORTHO05D005319 3.1e-25 120.2 220 34.5
C05p63460 Brassica napus HOM05D001295 ORTHO05D005319 4.0e-25 119.8 153 41.2
Gohir.A08G092500 Gossypium hirsutum HOM05D001295 ORTHO05D005319 6.9e-25 119.0 200 37.0
SGA_v2.0_scaffold12G06175 Striga asiatica HOM05D001295 ORTHO05D005319 9.0e-25 118.6 308 30.2
BolC5t35010H Brassica oleracea HOM05D001295 ORTHO05D005319 1.5e-24 117.9 153 41.2
FAN24G0827 Fragaria x ananassa HOM05D001295 ORTHO05D005319 5.8e-24 115.9 266 31.6
CsaV3_4G002500 Cucumis sativus L. HOM05D001295 ORTHO05D005319 1.3e-23 114.8 128 43.8
FAN15G1214 Fragaria x ananassa HOM05D001295 ORTHO05D005319 1.7e-23 114.4 148 39.2
FvH4_2g24830 Fragaria vesca HOM05D001295 ORTHO05D005319 2.2e-23 114.0 266 31.2
Migut.G01331 Erythranthe guttata HOM05D001295 ORTHO05D005319 2.9e-23 113.6 210 34.3
Thecc.04G173200 Theobroma cacao HOM05D001295 ORTHO05D005319 9.3e-22 108.6 228 32.5
Aa31LG5G13780 Aethionema arabicum HOM05D001295 ORTHO05D005319 1.6e-21 107.8 155 39.4
AT2G43465 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 3.1e-17 93.6 193 29.5
C01p44730 Brassica napus HOM05D001295 ORTHO05D005319 4.0e-17 93.2 245 27.3
Cpa.g.sc9.324 Carica papaya HOM05D001295 ORTHO05D005319 4.0e-17 93.2 96 50.0
unitig_37.g12026 Utricularia gibba HOM05D001295 ORTHO05D005319 1.5e-16 91.3 116 44.0
A09p42860 Brassica napus HOM05D001295 ORTHO05D005319 2.6e-16 90.5 230 28.7
vmacro00675 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 6.4e-15 85.9 180 31.1
Lj3g0015879 Lotus japonicus HOM05D001295 ORTHO05D005319 4.2e-14 83.2 147 36.1
Haze_01445 Corylus avellana HOM05D001295 ORTHO05D005319 1.5e-11 74.7 139 31.7
Lj3A83T16 Lonicera japonica HOM05D001295 ORTHO05D005319 1.5e-11 74.7 65 50.8
BolC2t06464H Brassica oleracea HOM05D001295 ORTHO05D005319 2.8e-10 70.5 181 28.2
MELO3C001160.2 Cucumis melo HOM05D001295 ORTHO05D005319 1.4e-06 58.2 43 60.5


User provided reference genes

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