Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_8620 Physcomitrium patens HOM05D003864 ORTHO05D004658 1.6e-168 595.9 285 100.0
Pp3c13_19760 Physcomitrium patens HOM05D003864 ORTHO05D004658 5.5e-124 448.0 282 75.2
Mapoly0090s0075 Marchantia polymorpha HOM05D003864 ORTHO05D004658 7.8e-102 374.4 283 65.0
AagrBONN_evm.TU.Sc2ySwM_344.1910 Anthoceros agrestis HOM05D003864 ORTHO05D004658 3.6e-99 365.5 279 62.0
Gorai.011G185900 Gossypium raimondii HOM05D003864 ORTHO05D004658 6.0e-94 348.2 258 62.4
Gohir.D10G166700 Gossypium hirsutum HOM05D003864 ORTHO05D004658 3.0e-93 345.9 258 62.0
Gohir.A10G101440 Gossypium hirsutum HOM05D003864 ORTHO05D004658 3.9e-93 345.5 258 62.0
Ciclev10005325m.g Citrus clementina HOM05D003864 ORTHO05D004658 5.0e-93 345.1 258 60.9
TWI53G0015 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 1.1e-92 344.0 258 62.0
TWI53G1008 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 1.1e-92 344.0 258 62.0
Aqoxy2G03115 Aquilegia oxysepala HOM05D003864 ORTHO05D004658 2.5e-92 342.8 258 60.1
Sed0008062 Sechium edule HOM05D003864 ORTHO05D004658 4.3e-92 342.0 274 58.8
ClCG06G005360 Citrullus lanatus HOM05D003864 ORTHO05D004658 5.6e-92 341.7 274 58.0
CsaV3_6G017400 Cucumis sativus L. HOM05D003864 ORTHO05D004658 7.3e-92 341.3 274 58.8
Sed0015457 Sechium edule HOM05D003864 ORTHO05D004658 7.3e-92 341.3 274 58.8
Eucgr.B01266 Eucalyptus grandis HOM05D003864 ORTHO05D004658 1.6e-91 340.1 258 59.7
MELO3C021355.2 Cucumis melo HOM05D003864 ORTHO05D004658 3.6e-91 339.0 274 58.0
AL4G36380 Arabidopsis lyrata HOM05D003864 ORTHO05D004658 4.7e-91 338.6 258 60.9
THA.LOC104821766 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 1.1e-90 337.4 258 60.1
CiPaw.01G152900 Carya illinoinensis HOM05D003864 ORTHO05D004658 1.4e-90 337.0 258 59.3
C03p25940 Brassica napus HOM05D003864 ORTHO05D004658 2.3e-90 336.3 259 60.2
Cfa015492 Carpinus fangiana HOM05D003864 ORTHO05D004658 2.3e-90 336.3 258 58.9
PGR004G1016 Punica granatum HOM05D003864 ORTHO05D004658 2.3e-90 336.3 259 57.1
PGSC0003DMG400030786 Solanum tuberosum HOM05D003864 ORTHO05D004658 2.3e-90 336.3 258 60.5
Sp4g21430 Schrenkiella parvula HOM05D003864 ORTHO05D004658 4.0e-90 335.5 258 60.1
Solyc01g067630.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 8.9e-90 334.3 258 60.1
Actinidia23428 Actinidia chinensis HOM05D003864 ORTHO05D004658 1.5e-89 333.6 258 59.3
Thhalv10016876m.g Eutrema salsugineum HOM05D003864 ORTHO05D004658 1.5e-89 333.6 258 59.7
LjContig00389g0005087 Lotus japonicus HOM05D003864 ORTHO05D004658 1.5e-89 333.6 262 58.4
Haze_01063 Corylus avellana HOM05D003864 ORTHO05D004658 3.4e-89 332.4 262 58.4
Carub.0004s2113 Capsella rubella HOM05D003864 ORTHO05D004658 5.8e-89 331.6 258 58.9
ECA240G1720 Erigeron canadensis HOM05D003864 ORTHO05D004658 7.5e-89 331.3 255 60.0
CBR_g37156 Chara braunii HOM05D003864 ORTHO05D004658 9.9e-89 330.9 271 58.7
Nn4g25986 Nelumbo nucifera HOM05D003864 ORTHO05D004658 9.9e-89 330.9 258 56.6
Prupe.1G142000 Prunus persica HOM05D003864 ORTHO05D004658 9.9e-89 330.9 287 54.0
GSVIVG01017804001 Vitis vinifera HOM05D003864 ORTHO05D004658 9.9e-89 330.9 265 58.1
CiPaw.02G086600 Carya illinoinensis HOM05D003864 ORTHO05D004658 1.3e-88 330.5 258 58.5
PSO210G7573 Papaver somniferum HOM05D003864 ORTHO05D004658 1.7e-88 330.1 258 58.9
PGR031G0559 Punica granatum HOM05D003864 ORTHO05D004658 1.7e-88 330.1 264 59.5
arahy.Tifrunner.gnm1.ann1.CLS5KG Arachis hypogaea HOM05D003864 ORTHO05D004658 2.2e-88 329.7 273 58.6
Zm00001eb341670 Zea mays HOM05D003864 ORTHO05D004658 2.2e-88 329.7 260 59.2
BraA05t19685Z Brassica rapa HOM05D003864 ORTHO05D004658 2.9e-88 329.3 258 58.5
CDE01G0506 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 2.9e-88 329.3 258 58.9
PSO170G3769 Papaver somniferum HOM05D003864 ORTHO05D004658 2.9e-88 329.3 258 58.9
Atru.chr4.2755 Acer truncatum HOM05D003864 ORTHO05D004658 4.9e-88 328.6 257 58.4
THA.LOC104820237 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 4.9e-88 328.6 283 56.5
Thecc.04G277700 Theobroma cacao HOM05D003864 ORTHO05D004658 4.9e-88 328.6 258 58.5
Duzib151G0071 Durio zibethinus HOM05D003864 ORTHO05D004658 6.4e-88 328.2 281 55.5
Manes.15G016900 Manihot esculenta HOM05D003864 ORTHO05D004658 6.4e-88 328.2 274 56.6
Sc19g0004950 Simmondsia chinensis HOM05D003864 ORTHO05D004658 8.3e-88 327.8 278 55.4
AT2G39080 Arabidopsis thaliana HOM05D003864 ORTHO05D004658 1.1e-87 327.4 257 59.5
Phvul.006G161500 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 1.1e-87 327.4 283 54.8
Lsat_1_v5_gn_5_56881 Lactuca sativa HOM05D003864 ORTHO05D004658 1.4e-87 327.0 258 58.5
Manes.03G191300 Manihot esculenta HOM05D003864 ORTHO05D004658 1.9e-87 326.6 258 57.8
Cc03_g02350 Coffea canephora HOM05D003864 ORTHO05D004658 3.2e-87 325.9 262 58.0
A03p21870 Brassica napus HOM05D003864 ORTHO05D004658 4.1e-87 325.5 271 57.2
Potri.008G204700 Populus trichocarpa HOM05D003864 ORTHO05D004658 4.1e-87 325.5 258 56.6
TAR633G1069 Trochodendron aralioides HOM05D003864 ORTHO05D004658 5.4e-87 325.1 258 57.4
MSTRG.10054 Avicennia marina HOM05D003864 ORTHO05D004658 7.1e-87 324.7 262 58.0
Glyma.15G097900 Glycine max HOM05D003864 ORTHO05D004658 9.2e-87 324.3 263 56.7
Lj4g0016445 Lotus japonicus HOM05D003864 ORTHO05D004658 1.2e-86 323.9 262 57.6
TAR362G0395 Trochodendron aralioides HOM05D003864 ORTHO05D004658 1.2e-86 323.9 258 58.5
FvH4_4g17200 Fragaria vesca HOM05D003864 ORTHO05D004658 1.6e-86 323.6 262 57.3
TPR.G1486 Trifolium pratense HOM05D003864 ORTHO05D004658 1.6e-86 323.6 262 57.3
Os01g0367100 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 2.1e-86 323.2 258 58.1
Peaxi162Scf00033g01410 Petunia axillaris HOM05D003864 ORTHO05D004658 2.1e-86 323.2 265 57.7
Ca_00573_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 2.7e-86 322.8 273 55.7
BraA03t11423Z Brassica rapa HOM05D003864 ORTHO05D004658 7.8e-86 321.2 272 57.0
Glyma.13G215300 Glycine max HOM05D003864 ORTHO05D004658 1.3e-85 320.5 263 56.7
Nitab4.5_0000784g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 1.3e-85 320.5 275 57.1
Lj6A670T81 Lonicera japonica HOM05D003864 ORTHO05D004658 1.7e-85 320.1 262 58.4
TPR.G23836 Trifolium pratense HOM05D003864 ORTHO05D004658 1.7e-85 320.1 272 54.0
vmacro08202 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 2.3e-85 319.7 268 56.3
Glyma.05G133900 Glycine max HOM05D003864 ORTHO05D004658 3.9e-85 318.9 260 57.7
Nn3g21324 Nelumbo nucifera HOM05D003864 ORTHO05D004658 3.9e-85 318.9 269 54.3
Nitab4.5_0004537g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 6.6e-85 318.2 282 55.7
CAN.G256.9 Capsicum annuum HOM05D003864 ORTHO05D004658 1.5e-84 317.0 277 57.0
BcaB01g03648 Brassica carinata HOM05D003864 ORTHO05D004658 1.9e-84 316.6 261 57.1
Migut.G00209 Erythranthe guttata HOM05D003864 ORTHO05D004658 1.9e-84 316.6 262 57.3
Lalb_Chr20g0118111 Lupinus albus HOM05D003864 ORTHO05D004658 2.5e-84 316.2 285 53.7
Phvul.002G188400 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 2.5e-84 316.2 260 56.5
Ah.12g064180 Amaranthus hybridus HOM05D003864 ORTHO05D004658 5.6e-84 315.1 263 55.9
Zm00001eb131760 Zea mays HOM05D003864 ORTHO05D004658 1.6e-83 313.5 258 55.4
Nitab4.5_0001054g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 2.1e-83 313.2 282 54.6
Nitab4.5_0001459g0140 Nicotiana tabacum HOM05D003864 ORTHO05D004658 2.8e-83 312.8 276 55.4
BcaB02g09145 Brassica carinata HOM05D003864 ORTHO05D004658 6.2e-83 311.6 258 57.0
Sabra08G0157300 Salix brachista HOM05D003864 ORTHO05D004658 6.2e-83 311.6 269 53.2
DCAR_027110 Daucus carota HOM05D003864 ORTHO05D004658 8.1e-83 311.2 270 54.8
Ca_18234_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 1.1e-82 310.8 269 53.2
A05p07200 Brassica napus HOM05D003864 ORTHO05D004658 2.4e-82 309.7 258 55.8
EL10Ac6g14524 Beta vulgaris HOM05D003864 ORTHO05D004658 6.8e-82 308.1 271 53.1
DCAR_002443 Daucus carota HOM05D003864 ORTHO05D004658 6.8e-82 308.1 281 50.2
SMO356G0587 Selaginella moellendorffii HOM05D003864 ORTHO05D004658 6.8e-82 308.1 260 57.3
Hund20596 Selenicereus undatus HOM05D003864 ORTHO05D004658 6.8e-82 308.1 262 55.0
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 1.5e-81 307.0 258 55.8
Glyma.08G088600 Glycine max HOM05D003864 ORTHO05D004658 9.9e-81 304.3 289 51.9
RcHm_v2.0_Chr4g0421021 Rosa chinensis HOM05D003864 ORTHO05D004658 9.9e-81 304.3 274 52.9
BcaC02g12038 Brassica carinata HOM05D003864 ORTHO05D004658 2.9e-80 302.8 258 55.0
arahy.Tifrunner.gnm1.ann1.ZU35GG Arachis hypogaea HOM05D003864 ORTHO05D004658 3.8e-80 302.4 281 53.7
Medtr4g094742 Medicago truncatula HOM05D003864 ORTHO05D004658 3.8e-80 302.4 275 53.1
Oeu044793.1 Olea europaea HOM05D003864 ORTHO05D004658 1.1e-79 300.8 263 53.6
Medtr2g020190 Medicago truncatula HOM05D003864 ORTHO05D004658 1.4e-79 300.4 262 55.0
Cpa.g.sc1008.4 Carica papaya HOM05D003864 ORTHO05D004658 2.1e-78 296.6 259 54.8
CDE05G0625 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 2.7e-78 296.2 258 54.7
C04p08610 Brassica napus HOM05D003864 ORTHO05D004658 3.5e-78 295.8 273 52.7
Dinv38324 Davidia involucrata HOM05D003864 ORTHO05D004658 2.3e-77 293.1 236 58.1
MD13G1173800 Malus domestica HOM05D003864 ORTHO05D004658 6.6e-77 291.6 262 53.4
Lalb_Chr07g0188241 Lupinus albus HOM05D003864 ORTHO05D004658 1.9e-76 290.0 269 52.8
Hma1.2p1_0150F.1_g066600 Hydrangea macrophylla HOM05D003864 ORTHO05D004658 5.6e-76 288.5 226 59.3
Actinidia00050 Actinidia chinensis HOM05D003864 ORTHO05D004658 2.1e-75 286.6 225 58.2
Lalb_Chr18g0055711 Lupinus albus HOM05D003864 ORTHO05D004658 2.8e-75 286.2 271 52.4
HPP92_017180 Vanilla planifolia HOM05D003864 ORTHO05D004658 6.4e-72 275.0 274 50.0
Peaxi162Scf00386g00316 Petunia axillaris HOM05D003864 ORTHO05D004658 1.3e-69 267.3 272 51.8
MD16G1174800 Malus domestica HOM05D003864 ORTHO05D004658 1.1e-68 264.2 314 43.9
Rhsim02G0013600 Rhododendron simsii HOM05D003864 ORTHO05D004658 3.3e-68 262.7 258 49.2
Psat1g187240 Pisum sativum HOM05D003864 ORTHO05D004658 2.1e-67 260.0 283 47.0
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 2.4e-66 256.5 244 50.4
COL.COLO4_13927 Corchorus olitorius HOM05D003864 ORTHO05D004658 1.3e-64 250.8 258 48.4
MCO15G076 Micromonas commoda HOM05D003864 ORTHO05D004658 1.4e-63 247.3 237 49.8
Rhsim04G0216400 Rhododendron simsii HOM05D003864 ORTHO05D004658 7.1e-63 245.0 307 43.6
MBI19_g44903_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 9.3e-63 244.6 202 56.9
CARHR133840 Cardamine hirsuta HOM05D003864 ORTHO05D004658 2.1e-62 243.4 182 59.9
ATR0706G015 Amborella trichopoda HOM05D003864 ORTHO05D004658 4.6e-62 242.3 269 46.1
vmacro22597 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 2.3e-61 240.0 314 41.1
vmacro15256 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 3.9e-61 239.2 314 41.1
SGA_v2.0_scaffold89G27550 Striga asiatica HOM05D003864 ORTHO05D004658 1.1e-60 237.7 261 44.8
SGA_v2.0_scaffold57G20242 Striga asiatica HOM05D003864 ORTHO05D004658 2.5e-60 236.5 263 46.4
Sc25g0004750 Simmondsia chinensis HOM05D003864 ORTHO05D004658 6.2e-59 231.9 175 61.7
Aa31LG5G20520 Aethionema arabicum HOM05D003864 ORTHO05D004658 8.1e-59 231.5 272 44.1
VMungo0251G3051 Vigna mungo HOM05D003864 ORTHO05D004658 7.6e-57 224.9 260 45.4
Cre13.g608000 Chlamydomonas reinhardtii HOM05D003864 ORTHO05D004658 3.5e-54 216.1 274 42.7
AUR62007746 Chenopodium quinoa HOM05D003864 ORTHO05D004658 4.6e-54 215.7 263 41.1
PRCOL_00006073 Prasinoderma coloniale HOM05D003864 ORTHO05D004658 5.6e-52 208.8 344 35.5
Os01g0367400 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 2.8e-51 206.5 258 41.1
FAN07G1078 Fragaria x ananassa HOM05D003864 ORTHO05D004658 8.2e-51 204.9 262 40.8
FAN17G0790 Fragaria x ananassa HOM05D003864 ORTHO05D004658 2.4e-50 203.4 262 40.5
arahy.Tifrunner.gnm1.ann1.858I9V Arachis hypogaea HOM05D003864 ORTHO05D004658 5.3e-50 202.2 324 36.7
arahy.Tifrunner.gnm1.ann1.WPBE4U Arachis hypogaea HOM05D003864 ORTHO05D004658 5.8e-49 198.7 324 36.1
FAN22G0711 Fragaria x ananassa HOM05D003864 ORTHO05D004658 2.2e-48 196.8 267 39.7
AUR62002937 Chenopodium quinoa HOM05D003864 ORTHO05D004658 8.4e-48 194.9 272 39.3
MBI19_g26585_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 7.9e-46 188.3 258 38.4
C04p08680 Brassica napus HOM05D003864 ORTHO05D004658 3.3e-44 183.0 170 51.8
BolC3t14979H Brassica oleracea HOM05D003864 ORTHO05D004658 2.2e-43 180.3 146 60.3
PGSC0003DMG400010656 Solanum tuberosum HOM05D003864 ORTHO05D004658 1.4e-42 177.6 163 56.4
Sopen01g029580 Solanum pennellii HOM05D003864 ORTHO05D004658 2.4e-42 176.8 146 58.9
SalBow2G1899 Salvia bowleyana HOM05D003864 ORTHO05D004658 4.1e-42 176.0 146 56.8
QL06p007391 Quercus lobata HOM05D003864 ORTHO05D004658 5.3e-42 175.6 146 56.8
Solyc06g054530.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 6.9e-42 175.3 146 57.5
unitig_748.g8369 Utricularia gibba HOM05D000472 ORTHO05D000344 6.9e-42 175.3 146 58.2
Sopen06g019600 Solanum pennellii HOM05D003864 ORTHO05D004658 4.5e-41 172.6 146 56.8
Dinv44425 Davidia involucrata HOM05D003864 ORTHO05D004658 1.3e-40 171.0 146 55.5
CSS0001944 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.2e-38 164.5 189 45.5
CSS0038005 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.6e-38 164.1 189 45.5
Psat7g088240 Pisum sativum HOM05D003864 ORTHO05D004658 1.6e-38 164.1 157 53.5
SHI00297 Sapria himalayana HOM05D003864 ORTHO05D004658 1.6e-38 164.1 500 26.2
FAN12G3853 Fragaria x ananassa HOM05D003864 ORTHO05D004658 5.1e-37 159.1 226 38.9
unitig_748.g8370 Utricularia gibba HOM05D003864 ORTHO05D004658 6.7e-37 158.7 117 57.3
BcaC02g12030 Brassica carinata HOM05D003864 ORTHO05D004658 3.3e-36 156.4 119 55.5
CDE12G0314 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.1e-34 151.4 105 61.9
HanXRQChr13g0411221 Helianthus annuus HOM05D003864 ORTHO05D004658 1.4e-34 151.0 102 60.8
SEGI_14152 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 5.3e-34 149.1 122 59.8
BolC4t22460H Brassica oleracea HOM05D003864 ORTHO05D004658 9.1e-34 148.3 130 53.1
HanXRQChr13g0411231 Helianthus annuus HOM05D003864 ORTHO05D004658 4.7e-30 136.0 109 56.9
CDE12G0924 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 6.1e-30 135.6 111 55.9
MSTRG.21813 Avicennia marina HOM05D003864 ORTHO05D004658 1.7e-27 127.5 104 59.6
SEGI_31487 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 2.5e-23 113.6 85 62.4
RcHm_v2.0_Chr4g0421071 Rosa chinensis HOM05D003864 ORTHO05D004658 4.2e-23 112.8 138 44.9
QL06p007393 Quercus lobata HOM05D003864 ORTHO05D004658 2.1e-22 110.5 82 56.1
SEGI_13555 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 4.8e-19 99.4 72 56.9
CSS0041699 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 6.3e-19 99.0 191 32.5
CSS0003637 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.6e-17 94.4 78 52.6
CSS0011053 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 1.6e-17 94.4 78 52.6
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 5.0e-16 89.4 73 56.2
Actinidia25721 Actinidia chinensis HOM05D003864 ORTHO05D004658 7.0e-10 68.9 71 43.7
RcHm_v2.0_Chr4g0421081 Rosa chinensis HOM05D003864 ORTHO05D004658 1.7e-08 64.3 58 46.6
Zm00001eb400060 Zea mays HOM05D003864 ORTHO05D004658 2.2e-08 63.9 49 55.1
CSS0015623 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 7.2e-07 58.9 50 50.0


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