Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 1.7e-85 319.3 165 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 1.1e-23 114.0 132 50.0
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 4.8e-19 98.6 149 45.0
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 1.1e-18 97.4 148 43.2
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 2.0e-17 93.2 87 50.6
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 2.6e-17 92.8 133 45.9
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 5.8e-17 91.7 104 44.2
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 5.8e-17 91.7 104 44.2
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 9.9e-17 90.9 144 40.3
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 9.9e-17 90.9 104 44.2
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 1.3e-16 90.5 103 46.6
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 1.3e-16 90.5 74 56.8
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 2.2e-16 89.7 107 43.9
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.2e-16 89.7 71 57.7
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 3.8e-16 89.0 87 48.3
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 4.9e-16 88.6 149 36.9
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 4.9e-16 88.6 120 40.8
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 6.4e-16 88.2 73 56.2
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 1.1e-15 87.4 88 51.1
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 1.4e-15 87.0 98 43.9
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 1.4e-15 87.0 127 43.3
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 1.4e-15 87.0 80 48.8
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 1.9e-15 86.7 80 50.0
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 1.9e-15 86.7 98 42.9
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 1.9e-15 86.7 74 52.7
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 1.9e-15 86.7 92 48.9
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 2.4e-15 86.3 91 49.5
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 2.4e-15 86.3 73 52.1
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 3.2e-15 85.9 74 54.1
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 3.2e-15 85.9 103 46.6
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 4.2e-15 85.5 74 52.7
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 4.2e-15 85.5 74 52.7
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 5.5e-15 85.1 103 42.7
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 5.5e-15 85.1 103 43.7
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 7.1e-15 84.7 88 46.6
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 7.1e-15 84.7 93 47.3
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 7.1e-15 84.7 91 48.4
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 9.3e-15 84.3 74 54.1
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 1.6e-14 83.6 91 48.4
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 1.6e-14 83.6 91 48.4
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 2.7e-14 82.8 77 49.4
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 2.7e-14 82.8 87 44.8
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.7e-14 82.8 70 57.1
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 3.5e-14 82.4 74 52.7
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 3.5e-14 82.4 71 53.5
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 3.5e-14 82.4 67 56.7
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 3.5e-14 82.4 74 52.7
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 4.6e-14 82.0 68 57.4
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 4.6e-14 82.0 71 52.1
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 6.0e-14 81.6 94 48.9
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 6.0e-14 81.6 74 51.4
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 6.0e-14 81.6 117 41.9
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 6.0e-14 81.6 83 47.0
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 7.9e-14 81.3 126 39.7
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 7.9e-14 81.3 88 44.3
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 7.9e-14 81.3 74 50.0
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 7.9e-14 81.3 88 44.3
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 1.0e-13 80.9 81 46.9
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.0e-13 80.9 67 56.7
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.3e-13 80.5 80 46.2
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.3e-13 80.5 82 48.8
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 1.8e-13 80.1 76 51.3
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 1.8e-13 80.1 97 43.3
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 2.3e-13 79.7 68 55.9
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 2.3e-13 79.7 68 55.9
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 3.0e-13 79.3 99 42.4
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 3.0e-13 79.3 77 46.8
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 3.9e-13 79.0 83 45.8
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 5.1e-13 78.6 125 38.4
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 5.1e-13 78.6 125 38.4
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 5.1e-13 78.6 101 43.6
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 5.1e-13 78.6 70 48.6
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 6.7e-13 78.2 71 50.7
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 6.7e-13 78.2 63 58.7
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 8.7e-13 77.8 71 49.3
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 8.7e-13 77.8 120 39.2
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 8.7e-13 77.8 63 58.7
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 8.7e-13 77.8 71 49.3
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 1.1e-12 77.4 71 49.3
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 1.1e-12 77.4 70 51.4
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 1.5e-12 77.0 77 44.2
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 2.5e-12 76.3 71 50.7
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 2.5e-12 76.3 70 50.0
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 3.3e-12 75.9 77 49.4
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 3.3e-12 75.9 74 48.6
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 3.3e-12 75.9 77 42.9
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 4.3e-12 75.5 64 53.1
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 4.3e-12 75.5 71 45.1
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 4.3e-12 75.5 75 52.0
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 5.6e-12 75.1 68 48.5
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 7.4e-12 74.7 64 53.1
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 9.6e-12 74.3 92 40.2
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.1e-11 73.2 70 51.4
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.1e-11 73.2 70 51.4
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 2.1e-11 73.2 104 40.4
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 3.7e-11 72.4 64 53.1
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 6.2e-11 71.6 71 43.7
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 6.2e-11 71.6 71 50.7
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 8.1e-11 71.2 71 42.3
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 8.1e-11 71.2 60 53.3
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 8.1e-11 71.2 76 42.1
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 3.1e-10 69.3 64 50.0
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 2.0e-09 66.6 79 45.6
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.7e-08 63.5 56 51.8
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 2.9e-08 62.8 69 44.9
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.9e-07 60.1 63 49.2
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 1.6e-06 57.0 46 50.0


User provided reference genes

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