Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 2.4e-193 678.7 359 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 7.5e-118 427.9 278 78.4
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 8.8e-111 404.4 272 75.4
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 6.6e-106 388.3 274 72.6
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 1.4e-100 370.5 349 62.5
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 1.3e-98 364.0 277 66.1
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 1.3e-98 364.0 274 67.2
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 1.1e-97 360.9 272 67.6
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 1.9e-97 360.1 273 65.9
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 2.5e-97 359.8 263 68.1
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 3.3e-97 359.4 264 68.9
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.3e-97 359.0 266 68.0
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 4.3e-97 359.0 272 67.3
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 4.3e-97 359.0 273 65.6
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 5.6e-97 358.6 297 64.0
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 9.5e-97 357.8 263 68.1
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 9.5e-97 357.8 286 63.3
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 1.6e-96 357.1 264 68.6
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.6e-96 357.1 264 68.6
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 2.1e-96 356.7 263 68.1
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 2.1e-96 356.7 263 68.1
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 2.8e-96 356.3 266 67.7
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.6e-96 355.9 264 68.2
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 3.6e-96 355.9 263 68.1
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 4.7e-96 355.5 269 67.3
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 4.7e-96 355.5 267 66.7
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 8.0e-96 354.8 276 64.9
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 8.0e-96 354.8 295 61.7
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 8.0e-96 354.8 330 58.2
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 8.0e-96 354.8 268 65.3
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 1.0e-95 354.4 276 64.9
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 1.0e-95 354.4 276 64.9
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.0e-95 354.4 269 66.5
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 1.4e-95 354.0 271 67.9
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 1.4e-95 354.0 274 65.0
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 1.4e-95 354.0 271 65.3
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 2.3e-95 353.2 332 58.7
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 3.1e-95 352.8 300 62.3
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 3.1e-95 352.8 264 67.4
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 4.0e-95 352.4 277 65.0
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 5.2e-95 352.1 269 65.8
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 5.2e-95 352.1 265 68.7
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 5.2e-95 352.1 269 65.8
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 6.8e-95 351.7 339 57.8
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 6.8e-95 351.7 267 65.2
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 6.8e-95 351.7 269 65.8
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 8.9e-95 351.3 331 58.6
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 1.2e-94 350.9 277 64.6
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.2e-94 350.9 277 64.6
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 1.2e-94 350.9 269 66.5
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 2.0e-94 350.1 277 65.3
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 2.0e-94 350.1 276 63.8
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.4e-94 349.4 258 68.2
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 5.8e-94 348.6 267 66.7
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 5.8e-94 348.6 323 57.3
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 7.5e-94 348.2 274 66.4
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 7.5e-94 348.2 265 66.8
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 9.8e-94 347.8 266 67.3
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.3e-93 347.4 280 63.6
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 1.7e-93 347.1 271 65.7
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 4.9e-93 345.5 277 64.3
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 4.9e-93 345.5 323 58.2
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 6.4e-93 345.1 271 64.6
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 6.4e-93 345.1 271 65.7
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 6.4e-93 345.1 277 65.0
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 6.4e-93 345.1 299 60.5
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 8.3e-93 344.7 271 65.3
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 8.3e-93 344.7 266 65.4
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.4e-92 344.0 305 58.4
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 1.9e-92 343.6 315 58.1
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 2.4e-92 343.2 251 68.1
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 4.1e-92 342.4 277 63.5
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 5.4e-92 342.0 267 63.7
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 1.6e-91 340.5 331 58.3
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 2.0e-91 340.1 331 57.1
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 2.0e-91 340.1 308 60.1
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 2.7e-91 339.7 264 65.9
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 2.7e-91 339.7 277 63.5
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 6.0e-91 338.6 277 63.2
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 6.0e-91 338.6 277 63.2
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 7.8e-91 338.2 277 63.2
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 7.8e-91 338.2 268 65.3
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.7e-90 337.0 325 57.5
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 1.7e-90 337.0 277 62.8
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 1.7e-90 337.0 277 62.8
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.7e-90 337.0 325 57.5
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 2.3e-90 336.7 265 63.0
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 2.3e-90 336.7 295 60.7
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 2.8e-88 329.7 277 62.5
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 4.7e-88 328.9 270 62.2
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 6.2e-88 328.6 261 64.0
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 8.0e-88 328.2 269 61.3
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 5.2e-87 325.5 331 55.6
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 9.8e-86 321.2 245 64.1
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.7e-85 320.5 229 67.7
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 6.4e-85 318.5 236 67.4
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 6.4e-85 318.5 236 67.4
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 4.1e-84 315.8 342 52.3
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 4.1e-84 315.8 274 59.9
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 5.4e-84 315.5 231 67.1
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.2e-83 314.3 237 65.8
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 6.0e-83 312.0 299 58.5
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.0e-82 311.2 270 60.4
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 2.1e-80 303.5 229 65.5
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 2.6e-78 296.6 253 58.1
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 4.4e-78 295.8 298 55.4
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 5.8e-78 295.4 209 71.3
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.1e-68 264.6 264 54.5
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 1.0e-50 204.9 177 61.0
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 6.2e-48 195.7 287 43.2
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.4e-46 189.9 245 46.1
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 3.8e-45 186.4 232 46.1
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 3.0e-42 176.8 171 57.3
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 2.5e-36 157.1 133 60.9
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 3.9e-34 149.8 107 61.7
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 1.6e-19 101.3 65 73.8
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 3.3e-17 93.6 67 68.7
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 2.6e-06 57.4 46 58.7


User provided reference genes

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