Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_24850 Physcomitrium patens HOM05D011321 ORTHO05D002558 0.0e+00 1436.0 754 100.0
Pp3c4_6340 Physcomitrium patens HOM05D011321 ORTHO05D002558 0.0e+00 1087.8 726 79.1
Pp3c3_32390 Physcomitrium patens HOM05D011321 ORTHO05D002558 2.1e-287 992.3 720 71.2
Pp3c7_250 Physcomitrium patens HOM05D011321 ORTHO05D002558 3.1e-206 722.6 640 58.6
Pp3c11_22850 Physcomitrium patens HOM05D011321 ORTHO05D002558 9.0e-206 721.1 627 58.9
Pp3c15_11580 Physcomitrium patens HOM05D011321 ORTHO05D002558 5.9e-165 585.5 619 51.2
Pp3c5_10560 Physcomitrium patens HOM05D011321 ORTHO05D002558 1.1e-99 368.6 629 37.0
Pp3c16_7080 Physcomitrium patens HOM05D011321 ORTHO05D002558 5.8e-96 356.3 619 35.5
Pp3c11_2920 Physcomitrium patens HOM05D011321 ORTHO05D002558 9.6e-91 339.0 602 34.2
Pp3c1_10720 Physcomitrium patens HOM05D011321 ORTHO05D002558 5.1e-84 316.6 612 33.5
Pp3c9_11390 Physcomitrium patens HOM05D011321 ORTHO05D002558 3.1e-81 307.4 392 44.1
Pp3c2_33610 Physcomitrium patens HOM05D011321 ORTHO05D002558 2.9e-79 300.8 621 32.9
Pp3c9_11400 Physcomitrium patens HOM05D011321 ORTHO05D002558 2.8e-42 177.9 131 61.1
AagrBONN_evm.TU.Sc2ySwM_362.2520 Anthoceros agrestis HOM05D011321 ORTHO05D002558 6.7e-36 156.8 282 33.7
AagrBONN_evm.TU.Sc2ySwM_362.2517 Anthoceros agrestis HOM05D011321 ORTHO05D002558 2.6e-35 154.8 318 35.5
AagrBONN_evm.TU.Sc2ySwM_344.2766 Anthoceros agrestis HOM05D011321 ORTHO05D002558 1.5e-27 129.0 275 33.5
MBI15_g16138_MAGBIO Magnolia biondii HOM05D002655 ORTHO05D002558 5.0e-15 87.4 303 29.0
TPR.G30443 Trifolium pratense HOM05D002655 ORTHO05D002558 8.6e-15 86.7 286 28.7
CANSAT56G2388 Cannabis sativa HOM05D002655 ORTHO05D002558 1.5e-14 85.9 269 28.3
LjContig00357g0012654 Lotus japonicus HOM05D002655 ORTHO05D002558 1.9e-14 85.5 292 27.4
PSO339G6376 Papaver somniferum HOM05D002655 ORTHO05D002558 7.3e-14 83.6 292 28.1
vmacro06940 Vaccinium macrocarpon HOM05D002655 ORTHO05D002558 9.5e-14 83.2 282 29.4
Actinidia29732 Actinidia chinensis HOM05D002655 ORTHO05D002558 1.2e-13 82.8 284 27.8
Haze_17293 Corylus avellana HOM05D002655 ORTHO05D002558 1.2e-13 82.8 282 26.6
Medtr5g083500 Medicago truncatula HOM05D002655 ORTHO05D002558 1.6e-13 82.4 291 28.2
Cfa001258 Carpinus fangiana HOM05D002655 ORTHO05D002558 2.1e-13 82.0 282 28.0
Duzib106G0019 Durio zibethinus HOM05D002655 ORTHO05D002558 3.6e-13 81.3 291 29.9
PSO384G4829 Papaver somniferum HOM05D002655 ORTHO05D002558 4.7e-13 80.9 292 27.7
CSS0020664 Camellia sinensis var. sinensis HOM05D002655 ORTHO05D002558 6.1e-13 80.5 280 29.3
Psat2g029840 Pisum sativum HOM05D002655 ORTHO05D002558 6.1e-13 80.5 297 28.6
Sp2g27250 Schrenkiella parvula HOM05D002655 ORTHO05D002558 6.1e-13 80.5 314 26.4
TWI14G0122 Tripterygium wilfordii HOM05D002655 ORTHO05D002558 6.1e-13 80.5 261 26.8
Peaxi162Scf01149g00019 Petunia axillaris HOM05D002655 ORTHO05D002558 1.0e-12 79.7 287 25.8
Phvul.008G219800 Phaseolus vulgaris HOM05D002655 ORTHO05D002558 1.0e-12 79.7 285 25.6
arahy.Tifrunner.gnm1.ann1.3X2JKH Arachis hypogaea HOM05D002655 ORTHO05D002558 1.4e-12 79.3 291 26.5
Sed0024814 Sechium edule HOM05D002655 ORTHO05D002558 1.4e-12 79.3 284 25.7
SEGI_02192 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 1.4e-12 79.3 301 25.6
Aa31LG1G17710 Aethionema arabicum HOM05D002655 ORTHO05D002558 1.8e-12 79.0 296 26.7
arahy.Tifrunner.gnm1.ann1.YSF7P1 Arachis hypogaea HOM05D002655 ORTHO05D002558 1.8e-12 79.0 273 24.5
BcaB02g09778 Brassica carinata HOM05D002655 ORTHO05D002558 1.8e-12 79.0 312 26.9
Solyc10g018120.2 Solanum lycopersicum HOM05D002655 ORTHO05D002558 1.8e-12 79.0 284 26.4
DCAR_027543 Daucus carota HOM05D002655 ORTHO05D002558 2.3e-12 78.6 281 26.0
Sc11g0005430 Simmondsia chinensis HOM05D002655 ORTHO05D002558 2.3e-12 78.6 282 27.3
Thecc.10G009000 Theobroma cacao HOM05D002655 ORTHO05D002558 2.3e-12 78.6 281 26.3
HPP92_001129 Vanilla planifolia HOM05D002655 ORTHO05D002558 2.3e-12 78.6 281 27.4
Thhalv10005630m.g Eutrema salsugineum HOM05D002655 ORTHO05D002558 3.0e-12 78.2 308 26.3
Glyma.02G261000 Glycine max HOM05D002655 ORTHO05D002558 3.0e-12 78.2 297 27.9
Lsat_1_v5_gn_2_125641 Lactuca sativa HOM05D002655 ORTHO05D002558 3.0e-12 78.2 283 29.0
VMungo0647G0549 Vigna mungo HOM05D002655 ORTHO05D002558 3.0e-12 78.2 297 25.9
Lalb_Chr10g0105341 Lupinus albus HOM05D002655 ORTHO05D002558 4.0e-12 77.8 267 27.0
Rhsim03G0147900 Rhododendron simsii HOM05D002655 ORTHO05D002558 4.0e-12 77.8 282 28.4
Aqoxy1G01282 Aquilegia oxysepala HOM05D002655 ORTHO05D002558 5.2e-12 77.4 288 27.4
Lalb_Chr08g0231431 Lupinus albus HOM05D002655 ORTHO05D002558 5.2e-12 77.4 291 25.1
CSS0048880 Camellia sinensis var. sinensis HOM05D002655 ORTHO05D002558 6.8e-12 77.0 280 28.6
THA.LOC104799957 Tarenaya hassleriana HOM05D002655 ORTHO05D002558 6.8e-12 77.0 297 26.3
Nn2g13265 Nelumbo nucifera HOM05D002655 ORTHO05D002558 8.9e-12 76.6 291 26.1
Prupe.2G257800 Prunus persica HOM05D002655 ORTHO05D002558 8.9e-12 76.6 286 26.6
BcaC01g02676 Brassica carinata HOM05D002655 ORTHO05D002558 1.2e-11 76.3 296 26.0
C03p62060 Brassica napus HOM05D002655 ORTHO05D002558 1.2e-11 76.3 296 26.0
MD01G1159800 Malus domestica HOM05D002655 ORTHO05D002558 1.2e-11 76.3 281 26.0
HanXRQChr14g0458771 Helianthus annuus HOM05D002655 ORTHO05D002558 1.5e-11 75.9 288 27.4
Hund15873 Selenicereus undatus HOM05D002655 ORTHO05D002558 1.5e-11 75.9 286 25.2
SEGI_33891 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 1.5e-11 75.9 245 26.5
PGSC0003DMG400019944 Solanum tuberosum HOM05D002655 ORTHO05D002558 1.5e-11 75.9 284 25.7
BolC3t18467H Brassica oleracea HOM05D002655 ORTHO05D002558 2.0e-11 75.5 291 26.5
BraA06t26030Z Brassica rapa HOM05D002655 ORTHO05D002558 2.0e-11 75.5 291 26.5
CAN.G203.24 Capsicum annuum HOM05D002655 ORTHO05D002558 2.0e-11 75.5 284 26.1
Nitab4.5_0003402g0050 Nicotiana tabacum HOM05D002655 ORTHO05D002558 2.0e-11 75.5 278 26.3
Nitab4.5_0026398g0010 Nicotiana tabacum HOM05D002655 ORTHO05D002558 2.0e-11 75.5 287 25.1
A06p30910 Brassica napus HOM05D002655 ORTHO05D002558 2.6e-11 75.1 291 26.5
AUR62022958 Chenopodium quinoa HOM05D002655 ORTHO05D002558 2.6e-11 75.1 287 26.1
ECA238G4387 Erigeron canadensis HOM05D002655 ORTHO05D002558 2.6e-11 75.1 282 29.1
GSVIVG01032739001 Vitis vinifera HOM05D002655 ORTHO05D002558 2.6e-11 75.1 281 26.7
Aqoxy2G00775 Aquilegia oxysepala HOM05D002655 ORTHO05D002558 3.4e-11 74.7 263 28.1
Psat5g132160 Pisum sativum HOM05D002655 ORTHO05D002558 3.4e-11 74.7 280 26.8
Ah.10g036090 Amaranthus hybridus HOM05D002655 ORTHO05D002558 4.4e-11 74.3 282 27.3
arahy.Tifrunner.gnm1.ann1.JHLY2S Arachis hypogaea HOM05D002655 ORTHO05D002558 4.4e-11 74.3 269 25.7
CiPaw.01G302400 Carya illinoinensis HOM05D002655 ORTHO05D002558 4.4e-11 74.3 282 27.0
AUR62012318 Chenopodium quinoa HOM05D002655 ORTHO05D002558 4.4e-11 74.3 283 26.1
Dinv10575 Davidia involucrata HOM05D002655 ORTHO05D002558 4.4e-11 74.3 281 26.7
FvH4_7g25370 Fragaria vesca HOM05D002655 ORTHO05D002558 5.7e-11 73.9 292 26.0
HanXRQChr07g0203491 Helianthus annuus HOM05D002655 ORTHO05D002558 5.7e-11 73.9 288 28.1
Lsat_1_v5_gn_2_125740 Lactuca sativa HOM05D002655 ORTHO05D002558 5.7e-11 73.9 285 29.1
Sopen10g007200 Solanum pennellii HOM05D002655 ORTHO05D002558 5.7e-11 73.9 192 27.6
TAR633G1667 Trochodendron aralioides HOM05D002655 ORTHO05D002558 5.7e-11 73.9 281 27.8
Eucgr.G01325 Eucalyptus grandis HOM05D002655 ORTHO05D002558 7.5e-11 73.6 322 24.8
AL8G41460 Arabidopsis lyrata HOM05D002655 ORTHO05D002558 9.8e-11 73.2 291 25.8
arahy.Tifrunner.gnm1.ann1.492DM0 Arachis hypogaea HOM05D002655 ORTHO05D002558 9.8e-11 73.2 269 25.7
Ciclev10031321m.g Citrus clementina HOM05D002655 ORTHO05D002558 9.8e-11 73.2 282 29.1
Oeu044272.1 Olea europaea HOM05D002655 ORTHO05D002558 9.8e-11 73.2 323 24.5
QL08p063992 Quercus lobata HOM05D002655 ORTHO05D002558 9.8e-11 73.2 284 27.5
SEGI_12685 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 9.8e-11 73.2 293 25.3
Migut.F00622 Erythranthe guttata HOM05D002655 ORTHO05D002558 1.3e-10 72.8 282 23.8
Eucgr.L00953 Eucalyptus grandis HOM05D002655 ORTHO05D002558 1.3e-10 72.8 322 24.5
Carub.0008s2498 Capsella rubella HOM05D002655 ORTHO05D002558 1.7e-10 72.4 290 26.2
Gohir.A06G160175 Gossypium hirsutum HOM05D002655 ORTHO05D002558 1.7e-10 72.4 287 27.2
AT5G64190 Arabidopsis thaliana HOM05D002655 ORTHO05D002558 2.2e-10 72.0 291 26.1
Gohir.D06G166200 Gossypium hirsutum HOM05D002655 ORTHO05D002558 2.2e-10 72.0 287 27.2
Nn2g11017 Nelumbo nucifera HOM05D002655 ORTHO05D002558 2.2e-10 72.0 287 27.5
Potri.010G183100 Populus trichocarpa HOM05D002655 ORTHO05D002558 2.2e-10 72.0 284 27.1
Duzib052G0908 Durio zibethinus HOM05D002655 ORTHO05D002558 2.9e-10 71.6 307 24.8
Sabra10G0140400 Salix brachista HOM05D002655 ORTHO05D002558 3.7e-10 71.2 284 27.1
Ca_15166_v3 Cicer arietinum L. HOM05D002655 ORTHO05D002558 4.9e-10 70.9 278 28.8
Dinv21796 Davidia involucrata HOM05D002655 ORTHO05D002558 4.9e-10 70.9 192 29.2
Medtr3g071950 Medicago truncatula HOM05D002655 ORTHO05D002558 4.9e-10 70.9 283 27.2
TPR.G30920 Trifolium pratense HOM05D002655 ORTHO05D002558 4.9e-10 70.9 278 26.6
Gohir.A03G185600 Gossypium hirsutum HOM05D002655 ORTHO05D002558 6.4e-10 70.5 309 24.3
Gorai.005G234500 Gossypium raimondii HOM05D002655 ORTHO05D002558 6.4e-10 70.5 308 24.4
Lj6g0018045 Lotus japonicus HOM05D002655 ORTHO05D002558 6.4e-10 70.5 280 26.4
Oeu051648.1 Olea europaea HOM05D002655 ORTHO05D002558 6.4e-10 70.5 282 25.5
TWI59G0767 Tripterygium wilfordii HOM05D002655 ORTHO05D002558 6.4e-10 70.5 180 29.4
SGA_v2.0_scaffold60G20951 Striga asiatica HOM05D002655 ORTHO05D002558 1.1e-09 69.7 286 27.3
RcHm_v2.0_Chr1g0371291 Rosa chinensis HOM05D002655 ORTHO05D002558 1.4e-09 69.3 281 25.6
MELO3C020095.2 Cucumis melo HOM05D002655 ORTHO05D002558 1.8e-09 68.9 291 25.8
MSTRG.27297 Avicennia marina HOM05D002655 ORTHO05D002558 3.2e-09 68.2 281 24.6
COL.COLO4_32575 Corchorus olitorius HOM05D002655 ORTHO05D002558 3.2e-09 68.2 329 24.3
Nitab4.5_0001480g0110 Nicotiana tabacum HOM05D002655 ORTHO05D002558 3.2e-09 68.2 213 27.2
Nitab4.5_0014669g0010 Nicotiana tabacum HOM05D002655 ORTHO05D002558 3.2e-09 68.2 213 26.3
Sabra09G0072400 Salix brachista HOM05D002655 ORTHO05D002558 3.2e-09 68.2 307 24.1
ATR0594G035 Amborella trichopoda HOM05D002655 ORTHO05D002558 5.4e-09 67.4 278 25.2
Ciclev10028186m.g Citrus clementina HOM05D002655 ORTHO05D002558 5.4e-09 67.4 323 25.4
SEGI_35148 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 5.4e-09 67.4 200 27.5
PGR044G1037 Punica granatum HOM05D002655 ORTHO05D002558 7.0e-09 67.0 281 25.3
ClCG07G004720 Citrullus lanatus HOM05D002655 ORTHO05D002558 9.2e-09 66.6 286 24.8
Phvul.001G246900 Phaseolus vulgaris HOM05D002655 ORTHO05D002558 9.2e-09 66.6 269 26.8
PGR042G3535 Punica granatum HOM05D002655 ORTHO05D002558 9.2e-09 66.6 325 25.8
Eucgr.J00165 Eucalyptus grandis HOM05D002655 ORTHO05D002558 1.2e-08 66.2 264 24.6
CARHR278100 Cardamine hirsuta HOM05D002655 ORTHO05D002558 2.0e-08 65.5 221 26.7
CsaV3_5G010640 Cucumis sativus L. HOM05D002655 ORTHO05D002558 2.0e-08 65.5 291 23.7
Gohir.D02G206848 Gossypium hirsutum HOM05D002655 ORTHO05D002558 2.0e-08 65.5 308 23.7
Gorai.010G193800 Gossypium raimondii HOM05D002655 ORTHO05D002558 2.7e-08 65.1 286 25.5
Lj8A60T46 Lonicera japonica HOM05D002655 ORTHO05D002558 2.7e-08 65.1 281 25.6
Potri.009G094100 Populus trichocarpa HOM05D002655 ORTHO05D002558 2.7e-08 65.1 308 25.0
Thecc.02G110600 Theobroma cacao HOM05D002655 ORTHO05D002558 4.6e-08 64.3 317 23.0
SalBow3G2865 Salvia bowleyana HOM05D002655 ORTHO05D002558 5.9e-08 63.9 282 24.5
VMungo1383G0439 Vigna mungo HOM05D002655 ORTHO05D002558 5.9e-08 63.9 192 27.6
COL.COLO4_25808 Corchorus olitorius HOM05D002655 ORTHO05D002558 7.8e-08 63.5 272 26.8
CSS0017818 Camellia sinensis var. sinensis HOM05D002655 ORTHO05D002558 1.3e-07 62.8 320 23.1
Aa31LG5G19190 Aethionema arabicum HOM05D002655 ORTHO05D002558 2.3e-07 62.0 293 23.9
CSS0016508 Camellia sinensis var. sinensis HOM05D002655 ORTHO05D002558 2.3e-07 62.0 320 23.8
CiPaw.05G013000 Carya illinoinensis HOM05D002655 ORTHO05D002558 3.0e-07 61.6 77 36.4
CSS0016448 Camellia sinensis var. sinensis HOM05D002655 ORTHO05D002558 8.6e-07 60.1 216 29.6
SEGI_27351 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 8.6e-07 60.1 177 26.0
THA.LOC104819551 Tarenaya hassleriana HOM05D002655 ORTHO05D002558 1.1e-06 59.7 330 22.7
SEGI_18342 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 1.5e-06 59.3 273 25.3
PGSC0003DMG400001288 Solanum tuberosum HOM05D002655 ORTHO05D002558 1.5e-06 59.3 245 26.5
Oeu044271.1 Olea europaea HOM05D002655 ORTHO05D002558 3.3e-06 58.2 296 24.0
unitig_37.g12463 Utricularia gibba HOM05D002655 ORTHO05D002558 4.3e-06 57.8 252 24.6
AagrBONN_evm.TU.Sc2ySwM_362.2518 Anthoceros agrestis HOM05D011321 ORTHO05D002558 5.6e-06 57.4 268 23.1
SEGI_04032 Sequoiadendron giganteum HOM05D002655 ORTHO05D002558 5.6e-06 57.4 262 25.2
Thhalv10016559m.g Eutrema salsugineum HOM05D002655 ORTHO05D002558 7.3e-06 57.0 299 25.8


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