Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_23820 Physcomitrium patens HOM05D005255 ORTHO05D006276 4.6e-79 297.7 141 100.0
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 6.4e-49 197.6 138 71.0
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 6.4e-49 197.6 138 71.0
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 2.4e-35 152.5 143 55.2
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 5.7e-21 104.8 76 59.2
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 2.8e-20 102.4 75 57.3
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 1.8e-19 99.8 75 54.7
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 4.1e-19 98.6 76 56.6
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 1.2e-18 97.1 75 53.3
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 1.5e-18 96.7 75 53.3
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 2.0e-18 96.3 75 54.7
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 2.0e-18 96.3 75 54.7
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 2.0e-18 96.3 75 56.0
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 2.6e-18 95.9 75 53.3
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 2.6e-18 95.9 75 54.7
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 2.6e-18 95.9 100 44.0
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 3.4e-18 95.5 75 54.7
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 3.4e-18 95.5 77 55.8
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 3.4e-18 95.5 74 54.1
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 3.4e-18 95.5 75 54.7
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 4.5e-18 95.1 94 44.7
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 5.9e-18 94.7 75 53.3
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 5.9e-18 94.7 75 53.3
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 5.9e-18 94.7 78 53.8
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 7.7e-18 94.4 75 52.0
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 7.7e-18 94.4 75 52.0
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 7.7e-18 94.4 75 54.7
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 7.7e-18 94.4 78 51.3
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 1.0e-17 94.0 75 53.3
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 1.0e-17 94.0 75 52.0
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 1.0e-17 94.0 75 56.0
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 1.0e-17 94.0 75 53.3
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 1.0e-17 94.0 75 54.7
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 1.3e-17 93.6 75 53.3
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 1.3e-17 93.6 75 53.3
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 1.3e-17 93.6 75 53.3
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 1.3e-17 93.6 75 57.3
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 1.7e-17 93.2 75 52.0
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 1.7e-17 93.2 77 53.2
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 1.7e-17 93.2 75 54.7
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.7e-17 93.2 75 53.3
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 2.2e-17 92.8 75 53.3
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 2.2e-17 92.8 75 50.7
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 2.9e-17 92.4 75 54.7
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 3.8e-17 92.0 99 48.5
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 3.8e-17 92.0 75 53.3
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 3.8e-17 92.0 75 53.3
PGSC0003DMG400012725 Solanum tuberosum HOM05D005255 ORTHO05D006276 3.8e-17 92.0 75 50.7
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 5.0e-17 91.7 75 50.7
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 5.0e-17 91.7 75 50.7
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 5.0e-17 91.7 75 52.0
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 5.0e-17 91.7 75 52.0
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 6.5e-17 91.3 75 50.7
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 6.5e-17 91.3 75 54.7
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 6.5e-17 91.3 75 52.0
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 6.5e-17 91.3 75 50.7
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 8.5e-17 90.9 75 52.0
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 8.5e-17 90.9 75 52.0
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 1.1e-16 90.5 75 49.3
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 1.1e-16 90.5 75 49.3
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 1.1e-16 90.5 75 49.3
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 1.1e-16 90.5 75 52.0
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 1.4e-16 90.1 75 52.0
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 1.4e-16 90.1 75 52.0
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 1.4e-16 90.1 75 52.0
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 1.4e-16 90.1 75 54.7
RcHm_v2.0_Chr3g0484121 Rosa chinensis HOM05D005255 ORTHO05D006276 1.4e-16 90.1 73 53.4
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 1.9e-16 89.7 75 49.3
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 1.9e-16 89.7 75 49.3
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 2.5e-16 89.4 100 44.0
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 2.5e-16 89.4 75 49.3
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 2.5e-16 89.4 75 52.0
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 2.5e-16 89.4 75 50.7
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 2.5e-16 89.4 75 52.0
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 2.5e-16 89.4 75 52.0
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 3.2e-16 89.0 75 50.7
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 3.2e-16 89.0 75 48.0
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 3.2e-16 89.0 75 52.0
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 3.2e-16 89.0 75 50.7
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 3.2e-16 89.0 75 54.7
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 4.2e-16 88.6 75 50.7
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 5.5e-16 88.2 75 49.3
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 5.5e-16 88.2 68 55.9
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 7.2e-16 87.8 75 50.7
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 9.4e-16 87.4 75 48.0
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 1.2e-15 87.0 75 48.0
SMO364G0001 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 1.2e-15 87.0 101 39.6
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 1.6e-15 86.7 76 51.3
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 2.1e-15 86.3 75 53.3
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 4.7e-15 85.1 75 49.3
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 1.0e-14 84.0 75 48.0
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 2.3e-14 82.8 135 34.1
unitig_8.g3497 Utricularia gibba HOM05D005255 ORTHO05D006276 5.2e-14 81.6 56 62.5
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 8.8e-14 80.9 77 45.5
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 2.0e-13 79.7 77 48.1
SEGI_00937 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 5.7e-13 78.2 54 59.3
HPP92_003249 Vanilla planifolia HOM05D005255 ORTHO05D006276 7.4e-13 77.8 70 47.1
vmacro09037 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 7.0e-11 71.2 55 52.7
MSTRG.6398 Avicennia marina HOM05D005255 ORTHO05D006276 2.0e-10 69.7 52 55.8
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 4.5e-10 68.6 74 40.5
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 1.3e-09 67.0 54 55.6
SMO364G0772 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 1.7e-09 66.6 138 31.2
Nitab4.5_0000826g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.2e-09 66.2 69 43.5
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 5.0e-09 65.1 58 48.3
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 5.0e-09 65.1 58 48.3
FAN02G3622 Fragaria x ananassa HOM05D005255 ORTHO05D006276 2.3e-06 56.2 45 55.6


User provided reference genes

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