Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.7e-151 539.3 263 100.0
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.1e-107 393.7 289 71.6
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.2e-93 347.1 286 64.0
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 5.5e-70 268.5 286 49.7
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 4.9e-58 228.8 281 45.6
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 6.0e-56 221.9 283 46.6
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 7.8e-56 221.5 284 46.8
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 7.8e-56 221.5 281 44.5
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.3e-55 219.9 283 46.3
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 3.0e-55 219.5 282 45.0
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 3.0e-55 219.5 283 45.6
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 5.0e-55 218.8 284 44.7
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 5.0e-55 218.8 283 43.5
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 6.6e-55 218.4 286 45.1
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 1.1e-54 217.6 281 46.3
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 1.1e-54 217.6 283 43.8
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 1.9e-54 216.9 284 43.3
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.9e-54 216.9 285 44.9
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 3.3e-54 216.1 282 46.1
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 3.3e-54 216.1 284 45.4
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 3.3e-54 216.1 285 45.6
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 3.3e-54 216.1 285 44.9
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 4.3e-54 215.7 282 45.4
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.3e-54 215.7 264 46.6
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.6e-54 215.3 285 45.6
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 7.3e-54 214.9 285 44.2
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 7.3e-54 214.9 285 44.2
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 9.5e-54 214.5 283 43.5
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 9.5e-54 214.5 285 45.3
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.2e-53 214.2 282 46.1
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.2e-53 214.2 285 44.6
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 1.6e-53 213.8 284 45.1
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.1e-53 213.4 284 45.1
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.1e-53 213.4 285 43.9
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.8e-53 213.0 285 44.6
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 2.8e-53 213.0 281 43.8
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 2.8e-53 213.0 281 43.8
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 2.8e-53 213.0 284 44.7
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 2.8e-53 213.0 283 43.5
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 2.8e-53 213.0 284 43.3
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 3.6e-53 212.6 282 45.4
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 3.6e-53 212.6 282 45.4
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 3.6e-53 212.6 282 45.4
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 3.6e-53 212.6 282 44.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 4.7e-53 212.2 285 44.2
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 4.7e-53 212.2 285 44.2
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 6.2e-53 211.8 283 44.2
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 8.0e-53 211.5 283 45.2
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 8.0e-53 211.5 282 44.7
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 8.0e-53 211.5 282 45.7
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 8.0e-53 211.5 283 44.2
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.1e-52 211.1 284 42.6
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.1e-52 211.1 285 44.2
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.4e-52 210.7 285 44.6
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.4e-52 210.7 285 44.9
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.4e-52 210.7 285 43.9
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 1.4e-52 210.7 283 42.8
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 1.8e-52 210.3 284 44.4
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.8e-52 210.3 282 44.3
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 2.3e-52 209.9 279 45.9
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 2.3e-52 209.9 283 44.5
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 2.3e-52 209.9 283 42.8
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 4.0e-52 209.1 284 44.0
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 4.0e-52 209.1 285 45.3
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 4.0e-52 209.1 284 44.0
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 5.2e-52 208.8 285 43.9
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 5.2e-52 208.8 285 43.2
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 5.2e-52 208.8 285 43.5
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 8.9e-52 208.0 285 43.9
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 8.9e-52 208.0 284 44.7
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.2e-51 207.6 284 44.4
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.5e-51 207.2 285 44.2
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 1.5e-51 207.2 284 43.0
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 2.0e-51 206.8 285 43.9
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 2.0e-51 206.8 284 43.0
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.0e-51 206.8 282 43.6
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 2.6e-51 206.5 284 44.4
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 4.4e-51 205.7 284 43.7
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 4.4e-51 205.7 284 42.6
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.8e-51 205.3 281 43.8
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 7.5e-51 204.9 282 42.6
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 9.8e-51 204.5 289 43.3
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 9.8e-51 204.5 281 43.4
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.7e-50 203.8 282 44.3
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 2.2e-50 203.4 285 43.2
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.9e-50 202.2 281 43.4
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 1.9e-49 200.3 284 42.3
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 6.6e-47 191.8 266 43.6
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.5e-46 190.7 284 42.6
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 9.5e-46 188.0 285 40.0
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 1.2e-43 181.0 285 40.0
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.3e-42 177.6 279 40.9
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.4e-41 174.1 284 39.4
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.4e-41 173.3 252 42.1
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 4.1e-41 172.6 284 40.5
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 9.5e-38 161.4 199 45.7
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 9.5e-38 161.4 285 36.8
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.2e-35 154.5 204 44.6
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.6e-35 153.3 197 42.1
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 2.9e-34 149.8 275 34.9
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 6.6e-31 138.7 172 43.0
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.1e-29 131.7 151 46.4
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.6e-27 126.7 153 46.4
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 4.2e-25 119.4 168 43.5
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.7e-23 114.0 164 41.5
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.3e-22 109.8 121 47.9
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.4e-17 93.6 153 38.6
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.3e-15 87.8 193 35.8
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.3e-14 83.2 105 48.6
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 1.3e-10 71.2 66 54.5
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 1.4e-09 67.8 116 36.2
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 2.7e-08 63.5 109 38.5
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 7.9e-08 62.0 52 55.8
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.6e-06 55.8 52 53.8


User provided reference genes

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