Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_21910 Physcomitrium patens HOM05D005576 ORTHO05D007010 0.0e+00 1949.5 1002 100.0
Mapoly0019s0146 Marchantia polymorpha HOM05D005576 ORTHO05D007010 0.0e+00 1290.8 1002 64.7
SMO141G0108 Selaginella moellendorffii HOM05D005576 ORTHO05D007010 6.6e-305 1050.8 992 56.1
PGSC0003DMG400022883 Solanum tuberosum HOM05D005576 ORTHO05D007010 8.9e-294 1013.8 1000 51.9
Nitab4.5_0004422g0040 Nicotiana tabacum HOM05D005576 ORTHO05D007010 2.6e-293 1012.3 992 52.0
Sopen03g041140 Solanum pennellii HOM05D005576 ORTHO05D007010 5.8e-293 1011.1 1000 51.8
Nitab4.5_0002898g0010 Nicotiana tabacum HOM05D005576 ORTHO05D007010 7.5e-293 1010.7 992 51.8
TAR626G1694 Trochodendron aralioides HOM05D005576 ORTHO05D007010 2.2e-292 1009.2 1001 51.8
ATR0598G079 Amborella trichopoda HOM05D005576 ORTHO05D007010 3.7e-292 1008.4 978 52.8
MBI13_g12059_MAGBIO Magnolia biondii HOM05D005576 ORTHO05D007010 5.4e-291 1004.6 1000 51.9
CAN.G668.41 Capsicum annuum HOM05D005576 ORTHO05D007010 2.0e-290 1002.7 999 51.6
Manes.11G019400 Manihot esculenta HOM05D005576 ORTHO05D007010 2.7e-290 1002.3 999 51.1
Nn8g38631 Nelumbo nucifera HOM05D005576 ORTHO05D007010 7.3e-288 994.2 1001 51.3
COL.COLO4_30746 Corchorus olitorius HOM05D005576 ORTHO05D007010 6.2e-287 991.1 997 51.1
Actinidia26024 Actinidia chinensis HOM05D005576 ORTHO05D007010 1.4e-286 989.9 995 50.4
Haze_16039 Corylus avellana HOM05D005576 ORTHO05D007010 2.3e-286 989.2 1000 50.7
Aqoxy7G04073 Aquilegia oxysepala HOM05D005576 ORTHO05D007010 7.5e-285 984.2 998 49.9
Prupe.3G039600 Prunus persica HOM05D005576 ORTHO05D007010 1.7e-284 983.0 995 51.5
Dinv20428 Davidia involucrata HOM05D005576 ORTHO05D007010 2.9e-284 982.2 1002 49.9
THA.LOC104808055 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 1.9e-283 979.5 995 50.1
QL05p004145 Quercus lobata HOM05D005576 ORTHO05D007010 2.4e-283 979.2 1000 50.9
CiPaw.01G218000 Carya illinoinensis HOM05D005576 ORTHO05D007010 4.1e-283 978.4 999 50.4
RcHm_v2.0_Chr2g0145781 Rosa chinensis HOM05D005576 ORTHO05D007010 3.9e-281 971.8 997 51.2
GSVIVG01016742001 Vitis vinifera HOM05D005576 ORTHO05D007010 3.9e-281 971.8 1001 49.9
Atru.chr1.3999 Acer truncatum HOM05D005576 ORTHO05D007010 5.1e-281 971.5 995 50.1
Nn6g35707 Nelumbo nucifera HOM05D005576 ORTHO05D007010 4.3e-280 968.4 1001 49.8
AagrBONN_evm.TU.Sc2ySwM_344.1866 Anthoceros agrestis HOM05D005576 ORTHO05D007010 5.6e-280 968.0 916 55.8
Thecc.06G121300 Theobroma cacao HOM05D005576 ORTHO05D007010 5.6e-280 968.0 993 49.7
VMungo1309G3067 Vigna mungo HOM05D005576 ORTHO05D007010 5.6e-280 968.0 996 50.2
Cc04_g01260 Coffea canephora HOM05D005576 ORTHO05D007010 7.3e-280 967.6 996 49.8
CSS0000574 Camellia sinensis var. sinensis HOM05D005576 ORTHO05D007010 3.6e-279 965.3 999 49.6
vmacro22036 Vaccinium macrocarpon HOM05D005576 ORTHO05D007010 6.2e-279 964.5 997 49.3
Aa31LG4G2910 Aethionema arabicum HOM05D005576 ORTHO05D007010 8.1e-279 964.1 996 49.2
Thhalv10018070m.g Eutrema salsugineum HOM05D005576 ORTHO05D007010 1.1e-278 963.8 995 49.3
FAN09G4405 Fragaria x ananassa HOM05D005576 ORTHO05D007010 1.1e-278 963.8 999 50.7
HanXRQChr09g0276901 Helianthus annuus HOM05D005576 ORTHO05D007010 1.1e-278 963.8 995 49.5
FvH4_6g34890 Fragaria vesca HOM05D005576 ORTHO05D007010 2.3e-278 962.6 999 50.6
Lj5C36G17 Lonicera japonica HOM05D005576 ORTHO05D007010 3.1e-278 962.2 990 49.5
MD09G1181500 Malus domestica HOM05D005576 ORTHO05D007010 3.1e-278 962.2 999 51.0
Peaxi162Scf00038g02138 Petunia axillaris HOM05D005576 ORTHO05D007010 5.2e-278 961.4 1087 47.4
CANSAT56G3183 Cannabis sativa HOM05D005576 ORTHO05D007010 6.8e-278 961.1 995 50.1
Migut.I01082 Erythranthe guttata HOM05D005576 ORTHO05D007010 1.5e-277 959.9 996 50.1
Rhsim12G0210100 Rhododendron simsii HOM05D005576 ORTHO05D007010 1.5e-277 959.9 981 49.4
CiPaw.02G135100 Carya illinoinensis HOM05D005576 ORTHO05D007010 2.2e-276 956.1 1002 49.2
PSO421G0066 Papaver somniferum HOM05D005576 ORTHO05D007010 2.2e-276 956.1 1010 49.7
CARHR065500 Cardamine hirsuta HOM05D005576 ORTHO05D007010 4.9e-276 954.9 996 48.8
DCAR_026415 Daucus carota HOM05D005576 ORTHO05D007010 6.4e-276 954.5 975 49.8
Lj1g0011724 Lotus japonicus HOM05D005576 ORTHO05D007010 6.4e-276 954.5 995 49.4
Dinv37863 Davidia involucrata HOM05D005576 ORTHO05D007010 1.1e-275 953.7 1025 49.0
Potri.003G066200 Populus trichocarpa HOM05D005576 ORTHO05D007010 2.4e-275 952.6 1000 48.2
AT1G72560 Arabidopsis thaliana HOM05D005576 ORTHO05D007010 3.2e-275 952.2 995 49.2
Lalb_Chr04g0261101 Lupinus albus HOM05D005576 ORTHO05D007010 3.2e-275 952.2 996 48.9
TWI31G0259 Tripterygium wilfordii HOM05D005576 ORTHO05D007010 5.4e-275 951.4 999 49.0
Glyma.19G263400 Glycine max HOM05D005576 ORTHO05D007010 2.1e-274 949.5 995 49.1
Ca_09568_v3 Cicer arietinum L. HOM05D005576 ORTHO05D007010 2.7e-274 949.1 995 49.4
Lsat_1_v5_gn_4_93500 Lactuca sativa HOM05D005576 ORTHO05D007010 3.5e-274 948.7 995 48.8
Psat3g000040 Pisum sativum HOM05D005576 ORTHO05D007010 3.5e-274 948.7 995 49.0
Gorai.011G059500 Gossypium raimondii HOM05D005576 ORTHO05D007010 6.0e-274 948.0 995 48.9
Carub.0002s1942 Capsella rubella HOM05D005576 ORTHO05D007010 7.8e-274 947.6 995 48.6
Lalb_Chr15g0076791 Lupinus albus HOM05D005576 ORTHO05D007010 1.7e-273 946.4 996 48.7
Duzib235G0347 Durio zibethinus HOM05D005576 ORTHO05D007010 3.9e-273 945.3 995 48.6
ECA232G2029 Erigeron canadensis HOM05D005576 ORTHO05D007010 3.9e-273 945.3 996 48.8
PGR102G0536 Punica granatum HOM05D005576 ORTHO05D007010 3.9e-273 945.3 1003 49.0
TPR.G28874 Trifolium pratense HOM05D005576 ORTHO05D007010 3.9e-273 945.3 995 48.6
Potri.001G168100 Populus trichocarpa HOM05D005576 ORTHO05D007010 5.1e-273 944.9 995 48.7
Gohir.A10G053800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 6.6e-273 944.5 998 48.8
Sc15g0000400 Simmondsia chinensis HOM05D005576 ORTHO05D007010 3.3e-272 942.2 999 49.2
Sed0003060 Sechium edule HOM05D005576 ORTHO05D007010 4.7e-271 938.3 996 48.7
Sp5g27640 Schrenkiella parvula HOM05D005576 ORTHO05D007010 1.8e-270 936.4 995 48.1
THA.LOC104812251 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 1.8e-270 936.4 995 48.4
MD17G1167700 Malus domestica HOM05D005576 ORTHO05D007010 3.1e-270 935.6 999 49.2
arahy.Tifrunner.gnm1.ann1.E27NE4 Arachis hypogaea HOM05D005576 ORTHO05D007010 6.8e-270 934.5 998 48.2
Ah.08g216850 Amaranthus hybridus HOM05D005576 ORTHO05D007010 8.9e-270 934.1 1000 49.1
EL10Ac7g16417 Beta vulgaris HOM05D005576 ORTHO05D007010 1.5e-269 933.3 1001 48.4
CsaV3_7G034420 Cucumis sativus L. HOM05D005576 ORTHO05D007010 3.4e-269 932.2 996 49.0
MELO3C024350.2 Cucumis melo HOM05D005576 ORTHO05D007010 4.4e-269 931.8 996 48.9
ClCG09G001010 Citrullus lanatus HOM05D005576 ORTHO05D007010 1.3e-268 930.2 1009 48.7
Medtr7g117565 Medicago truncatula HOM05D005576 ORTHO05D007010 1.3e-268 930.2 996 48.5
Ciclev10024809m.g Citrus clementina HOM05D005576 ORTHO05D007010 2.2e-268 929.5 995 49.2
Gohir.D10G055800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 1.4e-267 926.8 975 48.9
SGA_v2.0_scaffold71G23839 Striga asiatica HOM05D005576 ORTHO05D007010 3.2e-267 925.6 996 48.7
Sabra03G0038700 Salix brachista HOM05D005576 ORTHO05D007010 5.4e-267 924.9 969 48.4
SalBow6G0288 Salvia bowleyana HOM05D005576 ORTHO05D007010 5.4e-267 924.9 996 48.3
SalBow6G5091 Salvia bowleyana HOM05D005576 ORTHO05D007010 5.4e-267 924.9 996 48.3
arahy.Tifrunner.gnm1.ann1.W8MD5J Arachis hypogaea HOM05D005576 ORTHO05D007010 1.6e-266 923.3 1028 47.0
PSO063G0826 Papaver somniferum HOM05D005576 ORTHO05D007010 7.8e-266 921.0 1004 48.6
C06p46920 Brassica napus HOM05D005576 ORTHO05D007010 1.5e-264 916.8 1000 47.8
MSTRG.4792 Avicennia marina HOM05D005576 ORTHO05D007010 2.5e-264 916.0 998 48.6
BolC6t39733H Brassica oleracea HOM05D005576 ORTHO05D007010 1.6e-263 913.3 1000 47.7
AL2G32250 Arabidopsis lyrata HOM05D005576 ORTHO05D007010 8.1e-263 911.0 994 47.3
Oeu000412.2 Olea europaea HOM05D005576 ORTHO05D007010 1.4e-262 910.2 994 48.0
A07p38760 Brassica napus HOM05D005576 ORTHO05D007010 3.1e-262 909.1 999 47.7
BraA07t31429Z Brassica rapa HOM05D005576 ORTHO05D007010 1.7e-260 903.3 1000 47.6
Glyma.03G264400 Glycine max HOM05D005576 ORTHO05D007010 7.1e-259 897.9 996 47.7
Oeu015487.1 Olea europaea HOM05D005576 ORTHO05D007010 1.2e-258 897.1 975 48.0
Actinidia25327 Actinidia chinensis HOM05D005576 ORTHO05D007010 1.7e-257 893.3 910 50.5
Duzib160G0875 Durio zibethinus HOM05D005576 ORTHO05D007010 2.1e-255 886.3 998 46.5
MSTRG.10949 Avicennia marina HOM05D005576 ORTHO05D007010 4.8e-255 885.2 994 47.1
CDE05G1788 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 8.1e-255 884.4 995 45.7
CBR_g44922 Chara braunii HOM05D005576 ORTHO05D007010 1.1e-254 884.0 1079 45.2
FAN14G0396 Fragaria x ananassa HOM05D005576 ORTHO05D007010 1.2e-253 880.6 932 50.0
FAN02G3375 Fragaria x ananassa HOM05D005576 ORTHO05D007010 4.5e-253 878.6 999 47.5
AUR62001476 Chenopodium quinoa HOM05D005576 ORTHO05D007010 1.3e-247 860.5 974 46.7
SEGI_13199 Sequoiadendron giganteum HOM05D005576 ORTHO05D007010 3.7e-247 859.0 812 53.9
Solyc03g122370.4 Solanum lycopersicum HOM05D005576 ORTHO05D007010 2.6e-245 852.8 999 45.7
Hund18687 Selenicereus undatus HOM05D005576 ORTHO05D007010 1.3e-244 850.5 925 47.9
Zm00001eb327340 Zea mays HOM05D005576 ORTHO05D007010 1.5e-232 810.4 1002 45.2
Lj9A532T67 Lonicera japonica HOM05D005576 ORTHO05D007010 1.5e-229 800.4 923 45.8
Zm00001eb109040 Zea mays HOM05D005576 ORTHO05D007010 1.3e-228 797.3 1002 44.7
Os07g0613300 Oryza sativa ssp. japonica HOM05D005576 ORTHO05D007010 1.0e-220 771.2 1007 42.8
Oeu015486.1 Olea europaea HOM05D005576 ORTHO05D007010 1.3e-220 770.8 870 47.2
AUR62009889 Chenopodium quinoa HOM05D005576 ORTHO05D007010 1.0e-217 761.1 1009 42.6
CDE11G0151 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 4.8e-215 752.3 996 41.0
Eucgr.F04406 Eucalyptus grandis HOM05D005576 ORTHO05D007010 2.0e-200 703.7 924 41.3
Phvul.009G263000 Phaseolus vulgaris HOM05D005576 ORTHO05D007010 2.0e-192 677.2 725 49.5
HPP92_026306 Vanilla planifolia HOM05D005576 ORTHO05D007010 1.1e-187 661.4 745 48.6
unitig_899.g14764 Utricularia gibba HOM05D005576 ORTHO05D007010 1.6e-181 641.0 844 42.7
Actinidia27733 Actinidia chinensis HOM05D005576 ORTHO05D007010 9.2e-174 615.1 613 51.2
Actinidia26822 Actinidia chinensis HOM05D005576 ORTHO05D007010 1.5e-171 607.8 600 51.7
FAN05G3283 Fragaria x ananassa HOM05D005576 ORTHO05D007010 7.3e-155 552.4 629 47.7
Cre12.g496200 Chlamydomonas reinhardtii HOM05D005576 ORTHO05D007010 9.3e-142 508.8 1201 30.1
Cpa.g.sc589.4 Carica papaya HOM05D005576 ORTHO05D007010 2.4e-113 414.5 438 47.7
Cpa.g.sc1732.1 Carica papaya HOM05D005576 ORTHO05D007010 2.7e-93 347.8 303 54.1
Dinv20426 Davidia involucrata HOM05D005576 ORTHO05D007010 3.6e-93 347.4 296 55.4
Aa31LG4G2950 Aethionema arabicum HOM05D005576 ORTHO05D007010 3.0e-92 344.4 356 48.3
MCO02G354 Micromonas commoda HOM05D005576 ORTHO05D007010 1.1e-89 335.9 1087 27.3
Actinidia26823 Actinidia chinensis HOM05D005576 ORTHO05D007010 6.8e-60 236.9 268 43.7
Actinidia27734 Actinidia chinensis HOM05D005576 ORTHO05D007010 6.8e-60 236.9 268 43.7
PRCOL_00005439 Prasinoderma coloniale HOM05D005576 ORTHO05D007010 1.9e-54 218.8 958 24.8
HPP92_026305 Vanilla planifolia HOM05D005576 ORTHO05D007010 6.8e-44 183.7 244 42.2
C02p30110 Brassica napus HOM05D005576 ORTHO05D007010 9.0e-20 103.6 145 35.2
BcaB05g24764 Brassica carinata HOM05D005576 ORTHO05D007010 5.5e-17 94.4 123 46.3
BolC2t09060H Brassica oleracea HOM05D005576 ORTHO05D007010 6.0e-16 90.9 122 38.5
unitig_899.g14765 Utricularia gibba HOM05D005576 ORTHO05D007010 2.8e-13 82.0 112 39.3
BcaB05g24763 Brassica carinata HOM05D000046 ORTHO05D000457 4.8e-13 81.3 82 42.7
SalBow5G4342 Salvia bowleyana HOM05D003448 ORTHO05D004028 2.5e-09 68.9 95 38.9
ATR0752G129 Amborella trichopoda HOM05D002636 ORTHO05D003490 1.9e-06 59.3 255 23.1


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