Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 2.0e-262 908.7 505 100.0
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 6.8e-141 505.0 517 59.4
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 6.3e-38 162.9 544 33.8
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 1.8e-37 161.4 262 42.7
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 5.9e-36 156.4 397 34.8
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 7.7e-36 156.0 201 46.3
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 2.9e-35 154.1 405 35.6
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 2.9e-35 154.1 277 39.7
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 6.5e-35 152.9 408 32.8
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 8.5e-35 152.5 372 34.7
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 2.5e-34 151.0 275 41.8
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 4.2e-34 150.2 456 31.1
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 4.2e-34 150.2 438 31.1
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 5.5e-34 149.8 417 32.4
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 5.5e-34 149.8 417 32.4
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 7.2e-34 149.4 278 40.3
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 9.4e-34 149.1 442 32.8
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 9.4e-34 149.1 420 34.0
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.2e-33 148.7 417 32.4
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 1.2e-33 148.7 209 43.5
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 1.6e-33 148.3 414 34.3
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 1.6e-33 148.3 331 37.2
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 2.7e-33 147.5 263 38.4
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 3.6e-33 147.1 272 37.5
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 3.6e-33 147.1 416 32.7
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 6.1e-33 146.4 384 34.9
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 8.0e-33 146.0 452 33.4
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 1.0e-32 145.6 329 36.2
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 1.4e-32 145.2 416 33.4
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.4e-32 145.2 418 31.6
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.8e-32 144.8 417 31.9
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 2.3e-32 144.4 175 48.6
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 6.7e-32 142.9 405 33.6
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 6.7e-32 142.9 447 32.2
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 6.7e-32 142.9 404 34.2
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 8.8e-32 142.5 180 45.6
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 1.5e-31 141.7 410 34.1
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 2.0e-31 141.4 560 28.4
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 2.0e-31 141.4 427 30.2
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 5.7e-31 139.8 191 45.5
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 1.3e-30 138.7 443 31.4
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 1.7e-30 138.3 415 32.0
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 2.2e-30 137.9 448 31.9
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 2.8e-30 137.5 572 29.0
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 3.7e-30 137.1 441 31.7
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 6.3e-30 136.3 444 31.1
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 8.2e-30 136.0 432 32.2
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 8.2e-30 136.0 399 31.8
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.1e-29 135.6 288 37.8
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 1.8e-29 134.8 180 45.6
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 3.1e-29 134.0 459 30.9
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 3.1e-29 134.0 137 51.8
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 4.1e-29 133.7 410 32.7
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 5.3e-29 133.3 394 33.0
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 9.1e-29 132.5 406 32.8
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 3.5e-28 130.6 337 34.7
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 5.9e-28 129.8 434 30.9
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 5.9e-28 129.8 410 32.4
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 5.9e-28 129.8 362 33.1
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 7.7e-28 129.4 431 32.3
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 5.0e-27 126.7 566 28.4
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 8.5e-27 125.9 387 33.3
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 9.4e-26 122.5 451 30.6
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 1.6e-25 121.7 458 28.6
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 2.1e-25 121.3 193 40.4
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 4.7e-25 120.2 444 29.7
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 3.0e-24 117.5 257 34.6
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 8.8e-24 115.9 415 28.7
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 8.8e-24 115.9 227 36.6
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 1.2e-23 115.5 245 35.9
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 1.5e-23 115.2 399 31.3
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 1.5e-23 115.2 408 29.7
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 2.6e-23 114.4 276 33.3
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 3.4e-23 114.0 413 28.8
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 3.4e-23 114.0 423 31.4
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 5.7e-23 113.2 408 29.7
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 5.7e-23 113.2 309 32.0
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 7.5e-23 112.8 430 29.5
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 1.3e-22 112.1 431 27.4
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 1.7e-22 111.7 366 30.9
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 4.8e-22 110.2 374 31.6
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 1.8e-21 108.2 180 38.9
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 1.8e-21 108.2 180 38.9
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 3.1e-21 107.5 192 39.1
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 4.1e-21 107.1 415 29.4
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 4.1e-21 107.1 387 29.2
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 4.1e-21 107.1 445 29.4
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 5.4e-21 106.7 443 27.1
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 5.4e-21 106.7 394 29.2
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 7.0e-21 106.3 442 29.4
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 1.6e-20 105.1 425 28.5
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 1.6e-20 105.1 413 28.6
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 2.0e-20 104.8 448 28.3
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 2.7e-20 104.4 255 33.3
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 3.5e-20 104.0 238 33.6
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 3.5e-20 104.0 254 31.9
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 2.9e-19 100.9 395 29.9
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 6.5e-19 99.8 438 30.1
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 8.6e-19 99.4 560 25.7
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 1.1e-18 99.0 440 27.7
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 1.1e-18 99.0 391 31.7
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 1.9e-18 98.2 421 28.0
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 3.2e-18 97.4 289 30.8
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 7.2e-18 96.3 134 40.3
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 7.2e-18 96.3 414 27.5
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 1.2e-17 95.5 433 27.5
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 4.7e-17 93.6 532 28.4
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 8.0e-17 92.8 92 55.4
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 1.0e-16 92.4 460 27.2
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 1.8e-16 91.7 285 30.9
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 2.3e-16 91.3 435 26.7
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 6.8e-16 89.7 546 26.9
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.2e-15 89.0 246 31.7
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 1.5e-15 88.6 433 26.8
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 5.7e-15 86.7 229 34.5
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 1.3e-14 85.5 435 27.6
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 1.3e-14 85.5 521 26.1
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 2.2e-14 84.7 382 27.7
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 4.9e-14 83.6 459 26.8
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 8.6e-11 72.8 76 48.7
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.9e-10 71.6 94 42.6
PRCOL_00000793 Prasinoderma coloniale HOM05D002462 ORTHO05D007680 2.6e-07 61.2 139 30.9
SGA_v2.0_scaffold504G52523 Striga asiatica HOM05D001369 ORTHO05D001235 2.2e-06 58.2 118 28.8
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-06 57.4 88 33.0
Nitab4.5_0003401g0010 Nicotiana tabacum HOM05D001310 ORTHO05D001283 6.4e-06 56.6 140 29.3
Nitab4.5_0004556g0020 Nicotiana tabacum HOM05D001310 ORTHO05D001283 8.3e-06 56.2 140 27.9


User provided reference genes

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