Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 7.3e-142 507.3 271 100.0
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 4.9e-53 212.2 147 68.7
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 3.3e-49 199.5 192 56.2
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 4.3e-49 199.1 161 62.7
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 3.0e-47 193.0 162 61.1
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 7.5e-46 188.3 173 57.8
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 1.7e-45 187.2 154 63.0
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 2.2e-45 186.8 157 60.5
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 2.2e-45 186.8 157 60.5
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 2.2e-45 186.8 140 65.7
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 2.9e-45 186.4 140 66.4
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 3.7e-45 186.0 165 57.6
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 3.7e-45 186.0 166 59.6
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 3.7e-45 186.0 154 63.0
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 6.4e-45 185.3 165 60.0
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 6.4e-45 185.3 153 60.8
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 8.3e-45 184.9 145 62.1
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 8.3e-45 184.9 169 59.2
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 8.3e-45 184.9 153 63.4
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.1e-44 184.5 165 59.4
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 1.1e-44 184.5 161 60.2
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.1e-44 184.5 161 60.2
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.1e-44 184.5 165 59.4
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 1.1e-44 184.5 171 56.1
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 1.4e-44 184.1 167 59.9
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 1.4e-44 184.1 176 57.4
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 1.9e-44 183.7 165 58.8
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 1.9e-44 183.7 169 57.4
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.4e-44 183.3 136 66.9
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 2.4e-44 183.3 169 57.4
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 2.4e-44 183.3 150 63.3
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 3.2e-44 183.0 165 58.8
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 3.2e-44 183.0 165 58.8
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 3.2e-44 183.0 158 61.4
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 5.4e-44 182.2 143 64.3
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 5.4e-44 182.2 164 60.4
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 5.4e-44 182.2 169 56.8
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 5.4e-44 182.2 223 48.9
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 7.0e-44 181.8 169 58.0
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 7.0e-44 181.8 165 58.2
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 7.0e-44 181.8 167 59.9
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 7.0e-44 181.8 172 55.8
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 9.2e-44 181.4 178 54.5
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 1.2e-43 181.0 170 57.6
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.2e-43 181.0 155 60.6
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 1.2e-43 181.0 165 58.2
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.2e-43 181.0 135 65.2
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 1.2e-43 181.0 163 59.5
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 1.6e-43 180.6 173 54.3
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 2.0e-43 180.3 166 58.4
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 2.0e-43 180.3 164 57.9
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.0e-43 180.3 163 58.9
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 2.0e-43 180.3 142 63.4
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 2.0e-43 180.3 171 55.6
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.7e-43 179.9 160 61.9
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 2.7e-43 179.9 171 56.1
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 3.5e-43 179.5 171 56.7
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 3.5e-43 179.5 162 59.3
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 4.6e-43 179.1 145 62.1
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 4.6e-43 179.1 167 59.3
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 4.6e-43 179.1 136 66.2
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 4.6e-43 179.1 172 55.8
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 4.6e-43 179.1 186 52.7
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 6.0e-43 178.7 135 64.4
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 6.0e-43 178.7 138 63.8
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 6.0e-43 178.7 207 51.7
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 6.0e-43 178.7 160 61.9
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 7.8e-43 178.3 168 54.8
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 7.8e-43 178.3 159 57.9
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 1.0e-42 177.9 133 65.4
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 1.7e-42 177.2 153 58.8
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.7e-42 177.2 168 54.2
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 2.3e-42 176.8 156 58.3
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 2.3e-42 176.8 140 62.9
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 2.3e-42 176.8 174 54.0
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 3.0e-42 176.4 162 58.6
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 3.9e-42 176.0 162 58.0
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 3.9e-42 176.0 132 64.4
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 5.0e-42 175.6 163 56.4
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 5.0e-42 175.6 159 61.6
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 6.6e-42 175.3 165 56.4
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 6.6e-42 175.3 157 60.5
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 6.6e-42 175.3 166 56.0
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.1e-41 174.5 162 56.2
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 1.5e-41 174.1 161 59.0
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 1.5e-41 174.1 133 63.9
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 1.5e-41 174.1 163 56.4
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 2.5e-41 173.3 151 59.6
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 2.5e-41 173.3 168 54.2
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 3.3e-41 172.9 173 53.8
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 5.6e-41 172.2 155 56.8
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 2.1e-40 170.2 129 64.3
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 4.7e-40 169.1 127 67.7
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.1e-39 167.9 172 54.1
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 1.4e-39 167.5 128 64.8
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 2.3e-39 166.8 120 67.5
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.3e-39 166.8 127 63.0
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.3e-39 166.8 127 63.0
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 5.2e-39 165.6 157 56.7
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 2.6e-38 163.3 160 56.9
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 1.4e-36 157.5 167 49.1
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 4.1e-36 156.0 174 51.1
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 3.5e-35 152.9 169 51.5
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 2.3e-34 150.2 151 53.6
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 2.3e-34 150.2 146 54.8
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 1.5e-33 147.5 252 38.5
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 9.5e-33 144.8 205 42.0
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 1.4e-31 141.0 153 54.9
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 4.0e-31 139.4 105 63.8
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 7.5e-30 135.2 176 43.8
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.3e-26 124.4 153 46.4
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 8.1e-24 115.2 98 57.1
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 2.9e-21 106.7 212 34.4
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 1.7e-18 97.4 102 48.0
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 2.3e-18 97.1 158 37.3
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 6.9e-15 85.5 68 63.2
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 9.0e-15 85.1 163 39.3
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 7.6e-14 82.0 85 51.8
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 1.1e-12 78.2 87 50.6
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 3.2e-12 76.6 71 56.3
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 2.6e-06 57.0 56 48.2


User provided reference genes

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