Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_16200 Physcomitrium patens HOM05D009949 ORTHO05D012205 3.4e-144 515.0 260 100.0
Pp3c12_16280 Physcomitrium patens HOM05D009949 ORTHO05D012205 3.4e-144 515.0 260 100.0
Pp3c12_16320 Physcomitrium patens HOM05D009949 ORTHO05D012205 3.4e-144 515.0 260 100.0
Pp3c12_16190 Physcomitrium patens HOM05D009949 ORTHO05D012205 1.9e-118 429.5 260 87.7
Pp3c8_3159 Physcomitrium patens HOM05D009949 ORTHO05D012205 1.6e-08 64.3 32 81.2
Gohir.D03G161250 Gossypium hirsutum HOM05D009949 ORTHO05D012205 6.6e-07 58.9 29 79.3
arahy.Tifrunner.gnm1.ann1.IM1D59 Arachis hypogaea HOM05D002768 ORTHO05D002993 8.6e-07 58.5 30 80.0
Gorai.003G169900 Gossypium raimondii HOM05D009949 ORTHO05D012205 1.9e-06 57.4 29 79.3
Carub.0004s1134 Capsella rubella HOM05D009949 ORTHO05D012205 2.5e-06 57.0 62 46.8
ClCG09G019310 Citrullus lanatus HOM05D000088 ORTHO05D001217 2.5e-06 57.0 30 80.0
TPR.G30500 Trifolium pratense HOM05D009949 ORTHO05D012205 2.5e-06 57.0 26 88.5
Gohir.D06G191300 Gossypium hirsutum HOM05D009949 ORTHO05D012205 3.3e-06 56.6 25 88.0
Gorai.010G224400 Gossypium raimondii HOM05D009949 ORTHO05D012205 3.3e-06 56.6 25 88.0
EL10Ac7g17018 Beta vulgaris HOM05D007922 ORTHO05D009490 5.6e-06 55.8 24 91.7
Carub.0002s0448 Capsella rubella HOM05D009949 ORTHO05D012205 5.6e-06 55.8 24 91.7
Thhalv10027316m.g Eutrema salsugineum HOM05D009949 ORTHO05D012205 5.6e-06 55.8 24 91.7
Gohir.D10G078150 Gossypium hirsutum HOM05D009949 ORTHO05D012205 5.6e-06 55.8 24 91.7
Gorai.011G084900 Gossypium raimondii HOM05D009949 ORTHO05D012205 5.6e-06 55.8 24 91.7
Medtr1g097200 Medicago truncatula HOM05D009949 ORTHO05D012205 5.6e-06 55.8 24 91.7
Cpa.g.sc1380.1 Carica papaya HOM05D005708 ORTHO05D007371 7.3e-06 55.5 30 73.3
C01p14920 Brassica napus HOM05D009949 ORTHO05D012205 9.5e-06 55.1 24 87.5
Carub.0002s0438 Capsella rubella HOM05D009949 ORTHO05D012205 9.5e-06 55.1 24 87.5
Carub.0002s0471 Capsella rubella HOM05D009949 ORTHO05D012205 9.5e-06 55.1 24 87.5
Migut.E01596 Erythranthe guttata HOM05D009949 ORTHO05D012205 9.5e-06 55.1 24 87.5
Gorai.007G227900 Gossypium raimondii HOM05D009949 ORTHO05D012205 9.5e-06 55.1 24 87.5
THA.LOC104820128 Tarenaya hassleriana HOM05D007656 ORTHO05D008529 9.5e-06 55.1 24 87.5


User provided reference genes

Program Settings