Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 0.0e+00 1231.9 620 100.0
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 5.0e-154 548.9 417 67.1
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 2.0e-150 537.0 460 61.3
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 2.0e-150 537.0 460 61.3
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 3.4e-150 536.2 424 64.4
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 3.4e-150 536.2 424 64.4
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 3.4e-150 536.2 424 64.4
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 7.5e-150 535.0 406 67.0
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 1.7e-149 533.9 437 64.5
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 2.8e-149 533.1 423 63.8
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 4.9e-149 532.3 445 62.7
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 6.3e-149 531.9 463 61.6
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 6.3e-149 531.9 414 64.5
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 8.3e-149 531.6 525 54.9
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 1.8e-148 530.4 421 63.2
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 2.4e-148 530.0 423 63.8
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 2.4e-148 530.0 508 57.7
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 4.1e-148 529.3 514 55.8
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 4.1e-148 529.3 471 59.4
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 7.0e-148 528.5 404 65.8
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 7.0e-148 528.5 437 63.2
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 9.2e-148 528.1 421 63.4
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 9.2e-148 528.1 439 62.4
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 1.2e-147 527.7 383 67.6
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 1.6e-147 527.3 422 64.9
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 1.6e-147 527.3 549 53.6
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 2.0e-147 526.9 404 65.1
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 2.7e-147 526.6 426 62.7
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 2.7e-147 526.6 449 60.6
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 3.5e-147 526.2 423 62.4
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 4.5e-147 525.8 407 64.6
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 4.5e-147 525.8 435 62.3
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 5.9e-147 525.4 434 62.7
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 5.9e-147 525.4 447 60.9
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 5.9e-147 525.4 428 62.1
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 5.9e-147 525.4 435 62.3
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 7.7e-147 525.0 407 64.6
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 7.7e-147 525.0 434 62.7
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 1.0e-146 524.6 407 64.6
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.0e-146 524.6 421 62.9
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 1.0e-146 524.6 383 67.4
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 1.0e-146 524.6 381 68.5
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 1.3e-146 524.2 447 60.4
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.3e-146 524.2 445 60.7
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 1.3e-146 524.2 406 65.3
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 1.7e-146 523.9 423 64.8
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 1.7e-146 523.9 434 61.3
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 2.3e-146 523.5 389 68.1
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 2.3e-146 523.5 447 61.1
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 2.3e-146 523.5 474 59.1
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.9e-146 523.1 437 61.8
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 2.9e-146 523.1 413 63.2
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 2.9e-146 523.1 446 60.8
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 2.9e-146 523.1 447 61.1
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 2.9e-146 523.1 447 61.1
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 2.9e-146 523.1 436 61.0
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 3.8e-146 522.7 402 64.2
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 3.8e-146 522.7 432 62.5
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 5.0e-146 522.3 547 56.1
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 6.6e-146 521.9 449 62.6
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 6.6e-146 521.9 495 57.6
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 6.6e-146 521.9 405 65.2
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 6.6e-146 521.9 518 54.6
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 1.1e-145 521.2 435 60.7
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.5e-145 520.8 390 66.2
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 1.5e-145 520.8 426 64.1
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.5e-145 520.8 406 65.3
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 1.5e-145 520.8 410 64.4
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.5e-145 520.8 403 65.0
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 1.5e-145 520.8 391 66.2
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 1.9e-145 520.4 409 64.3
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 1.9e-145 520.4 420 62.1
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.9e-145 520.4 443 60.0
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 2.5e-145 520.0 449 60.4
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 2.5e-145 520.0 449 60.4
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.5e-145 520.0 435 60.5
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 3.3e-145 519.6 468 58.8
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 3.3e-145 519.6 461 61.6
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 5.6e-145 518.8 365 69.3
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 9.5e-145 518.1 403 64.5
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 1.2e-144 517.7 404 64.6
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 1.6e-144 517.3 433 61.7
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 1.6e-144 517.3 389 66.8
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 1.6e-144 517.3 423 62.4
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 1.6e-144 517.3 427 61.8
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 1.6e-144 517.3 499 56.7
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 1.6e-144 517.3 427 60.7
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 2.8e-144 516.5 408 64.0
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 2.8e-144 516.5 442 59.7
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 3.6e-144 516.2 458 58.3
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 4.7e-144 515.8 456 59.9
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 4.7e-144 515.8 442 59.3
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 6.1e-144 515.4 365 68.8
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 6.1e-144 515.4 369 68.3
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 8.0e-144 515.0 446 60.3
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.0e-143 514.6 395 65.1
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.4e-143 514.2 407 64.1
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 1.4e-143 514.2 422 62.3
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 2.3e-143 513.5 403 65.0
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 2.3e-143 513.5 446 60.1
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.0e-143 513.1 471 58.2
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 3.0e-143 513.1 404 64.4
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 4.0e-143 512.7 463 58.1
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 6.8e-143 511.9 424 62.5
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 6.8e-143 511.9 410 63.4
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 8.9e-143 511.5 459 59.5
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 1.2e-142 511.1 400 65.0
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.2e-142 511.1 471 57.3
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 1.2e-142 511.1 413 63.0
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 9.8e-142 508.1 409 63.3
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 9.8e-142 508.1 383 66.3
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.3e-141 507.7 409 63.3
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 1.7e-141 507.3 425 61.9
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 1.7e-141 507.3 379 66.5
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.7e-141 507.3 409 63.3
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.7e-141 507.3 458 59.2
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 2.2e-141 506.9 369 68.0
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 2.9e-141 506.5 427 60.0
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 4.9e-141 505.8 386 66.1
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 4.9e-141 505.8 353 69.4
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 4.9e-141 505.8 353 69.4
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 6.4e-141 505.4 402 62.2
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 8.3e-141 505.0 451 58.8
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 1.4e-140 504.2 427 61.1
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.4e-140 503.4 499 54.7
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 5.4e-140 502.3 406 62.6
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 9.2e-140 501.5 448 57.8
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 1.6e-139 500.7 458 56.6
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.7e-138 497.3 546 52.4
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 3.0e-138 496.5 462 57.1
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 7.3e-137 491.9 369 66.4
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 6.2e-136 488.8 489 54.8
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.0e-135 488.0 364 65.4
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 3.4e-134 483.0 389 62.5
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 2.0e-131 473.8 433 58.2
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 3.6e-128 463.0 354 65.0
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 8.1e-128 461.8 460 54.8
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.1e-127 459.9 364 64.6
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 2.6e-126 456.8 369 63.1
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 3.6e-120 436.4 394 56.3
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.3e-117 427.9 312 66.7
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 6.4e-117 425.6 369 60.2
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 1.7e-98 364.4 371 53.1
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 8.1e-96 355.5 395 49.1
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 3.3e-81 307.0 207 71.0
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 2.4e-79 300.8 213 71.8
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 1.6e-75 288.1 195 70.8
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 9.4e-68 262.3 180 68.9
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.6e-67 260.4 284 51.8
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 1.0e-61 242.3 355 40.0
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 5.2e-58 229.9 158 69.6
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 7.4e-57 226.1 155 69.7
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 7.4e-57 226.1 155 69.7
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 1.7e-53 214.9 428 33.4
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 2.6e-49 201.1 195 51.3
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 5.3e-47 193.4 250 40.8
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 3.0e-42 177.6 110 77.3
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 6.3e-40 169.9 154 56.5
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 4.7e-35 153.7 127 59.8
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 2.8e-32 144.4 232 36.6
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 6.6e-29 133.3 106 61.3
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 1.8e-23 115.2 180 39.4
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 2.0e-22 111.7 109 51.4
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 7.3e-20 103.2 140 44.3
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.0e-17 95.1 72 61.1
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 7.5e-17 93.2 83 51.8
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 1.7e-16 92.0 83 51.8
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 7.8e-14 83.2 97 48.5
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 1.7e-13 82.0 113 39.8
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 4.7e-11 73.9 89 43.8
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 1.1e-10 72.8 194 30.4
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 1.7e-08 65.5 48 62.5
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 1.4e-07 62.4 81 40.7


User provided reference genes

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