Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_14500 Physcomitrium patens HOM05D003721 ORTHO05D004303 0.0e+00 1124.4 688 100.0
Pp3c3_18730 Physcomitrium patens HOM05D003721 ORTHO05D004303 3.1e-181 639.4 728 58.5
Mapoly0053s0042 Marchantia polymorpha HOM05D003721 ORTHO05D004303 2.8e-81 307.4 800 32.9
PSO170G3080 Papaver somniferum HOM05D003721 ORTHO05D004303 1.0e-75 288.9 385 47.5
PSO063G0643 Papaver somniferum HOM05D003721 ORTHO05D004303 1.8e-75 288.1 385 47.5
SEGI_16602 Sequoiadendron giganteum HOM05D003721 ORTHO05D004303 1.7e-73 281.6 312 52.2
MBI07_g11740_MAGBIO Magnolia biondii HOM05D003721 ORTHO05D004303 1.2e-71 275.4 381 46.2
ATR1093G009 Amborella trichopoda HOM05D003721 ORTHO05D004303 2.6e-71 274.2 373 45.6
Nn1g01721 Nelumbo nucifera HOM05D003721 ORTHO05D004303 2.6e-71 274.2 379 47.2
Cpa.g.sc11.59 Carica papaya HOM05D003721 ORTHO05D004303 1.7e-70 271.6 375 46.1
Hund16678 Selenicereus undatus HOM05D003721 ORTHO05D004303 3.8e-70 270.4 378 45.8
TWI59G1183 Tripterygium wilfordii HOM05D003721 ORTHO05D004303 1.1e-69 268.9 363 47.1
Duzib138G0478 Durio zibethinus HOM05D003721 ORTHO05D004303 1.9e-69 268.1 307 51.1
EL10Ac1g00346 Beta vulgaris HOM05D003721 ORTHO05D004303 2.5e-69 267.7 365 46.6
TAR629G3186 Trochodendron aralioides HOM05D003721 ORTHO05D004303 5.5e-69 266.5 376 45.5
Cfa003861 Carpinus fangiana HOM05D003721 ORTHO05D004303 7.2e-69 266.2 358 46.4
VMungo0331G1476 Vigna mungo HOM05D003721 ORTHO05D004303 7.2e-69 266.2 334 48.2
Glyma.09G253700 Glycine max HOM05D003721 ORTHO05D004303 9.4e-69 265.8 306 50.0
TPR.G29569 Trifolium pratense HOM05D003721 ORTHO05D004303 9.4e-69 265.8 330 47.6
Glyma.07G062500 Glycine max HOM05D003721 ORTHO05D004303 1.2e-68 265.4 330 48.2
Glyma.18G239200 Glycine max HOM05D003721 ORTHO05D004303 1.2e-68 265.4 309 50.2
Lalb_Chr17g0338961 Lupinus albus HOM05D003721 ORTHO05D004303 1.2e-68 265.4 381 45.4
HPP92_023080 Vanilla planifolia HOM05D003721 ORTHO05D004303 1.6e-68 265.0 334 46.1
arahy.Tifrunner.gnm1.ann1.X01UQ7 Arachis hypogaea HOM05D003721 ORTHO05D004303 2.1e-68 264.6 360 46.4
Manes.07G084500 Manihot esculenta HOM05D003721 ORTHO05D004303 1.0e-67 262.3 375 45.9
arahy.Tifrunner.gnm1.ann1.J8U9TP Arachis hypogaea HOM05D003721 ORTHO05D004303 2.3e-67 261.2 303 50.8
Os08g0386900 Oryza sativa ssp. japonica HOM05D003721 ORTHO05D004303 2.3e-67 261.2 349 47.0
Zm00001eb042060 Zea mays HOM05D003721 ORTHO05D004303 3.9e-67 260.4 368 46.2
Lj1g0019249 Lotus japonicus HOM05D003721 ORTHO05D004303 5.2e-67 260.0 350 46.0
Medtr8g028445 Medicago truncatula HOM05D003721 ORTHO05D004303 6.7e-67 259.6 336 46.7
Potri.014G091300 Populus trichocarpa HOM05D003721 ORTHO05D004303 6.7e-67 259.6 337 48.1
ECA240G1536 Erigeron canadensis HOM05D003721 ORTHO05D004303 1.1e-66 258.8 311 49.5
Gohir.A11G093000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 1.1e-66 258.8 370 45.9
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 1.5e-66 258.5 379 45.9
CiPaw.01G068800 Carya illinoinensis HOM05D003721 ORTHO05D004303 2.0e-66 258.1 380 45.5
Sc23g0002500 Simmondsia chinensis HOM05D003721 ORTHO05D004303 2.6e-66 257.7 384 44.3
CSS0038344 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 7.4e-66 256.1 379 43.3
AUR62004419 Chenopodium quinoa HOM05D003721 ORTHO05D004303 7.4e-66 256.1 303 49.2
Aqoxy5G04062 Aquilegia oxysepala HOM05D003721 ORTHO05D004303 1.3e-65 255.4 307 49.5
Dinv43871 Davidia involucrata HOM05D003721 ORTHO05D004303 1.3e-65 255.4 703 32.6
COL.COLO4_06374 Corchorus olitorius HOM05D003721 ORTHO05D004303 3.7e-65 253.8 756 32.3
AUR62022625 Chenopodium quinoa HOM05D003721 ORTHO05D004303 4.8e-65 253.4 303 48.5
Phvul.008G057500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 4.8e-65 253.4 291 50.2
Phvul.010G105500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 8.2e-65 252.7 319 50.8
Rhsim07G0009400 Rhododendron simsii HOM05D003721 ORTHO05D004303 1.1e-64 252.3 385 42.6
Ca_07946_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 1.8e-64 251.5 336 44.9
Nitab4.5_0000915g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 5.3e-64 250.0 346 48.3
Atru.chr5.592 Acer truncatum HOM05D003721 ORTHO05D004303 7.0e-64 249.6 388 43.8
PGR031G3178 Punica granatum HOM05D003721 ORTHO05D004303 7.0e-64 249.6 312 50.3
VMungo1383G3272 Vigna mungo HOM05D003721 ORTHO05D004303 9.1e-64 249.2 295 49.5
Dinv32529 Davidia involucrata HOM05D003721 ORTHO05D004303 1.2e-63 248.8 763 31.5
Sed0001790 Sechium edule HOM05D003721 ORTHO05D004303 1.2e-63 248.8 380 44.5
Thecc.01G351200 Theobroma cacao HOM05D003721 ORTHO05D004303 1.2e-63 248.8 761 32.2
Actinidia20169 Actinidia chinensis HOM05D003721 ORTHO05D004303 1.6e-63 248.4 368 45.7
Potri.002G165500 Populus trichocarpa HOM05D003721 ORTHO05D004303 1.6e-63 248.4 383 43.9
Cc02_g38690 Coffea canephora HOM05D003721 ORTHO05D004303 2.0e-63 248.1 754 30.6
Gohir.D12G110000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 3.5e-63 247.3 682 32.4
Lalb_Chr04g0259321 Lupinus albus HOM05D003721 ORTHO05D004303 3.5e-63 247.3 316 47.8
CDE08G1001 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 7.7e-63 246.1 660 31.4
DCAR_008641 Daucus carota HOM05D003721 ORTHO05D004303 1.7e-62 245.0 353 44.5
CDE02G2110 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 2.2e-62 244.6 650 33.1
Peaxi162Scf00020g01717 Petunia axillaris HOM05D003721 ORTHO05D004303 2.9e-62 244.2 360 46.9
GSVIVG01027009001 Vitis vinifera HOM05D003721 ORTHO05D004303 3.8e-62 243.8 271 52.8
Duzib133G0509 Durio zibethinus HOM05D003721 ORTHO05D004303 5.0e-62 243.4 757 32.2
Eucgr.D02329 Eucalyptus grandis HOM05D003721 ORTHO05D004303 5.0e-62 243.4 352 45.2
AT2G46180 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 6.5e-62 243.0 262 51.1
MD07G1130300 Malus domestica HOM05D003721 ORTHO05D004303 6.5e-62 243.0 311 46.6
CARHR141460 Cardamine hirsuta HOM05D003721 ORTHO05D004303 8.5e-62 242.7 263 52.9
Sabra14G0066200 Salix brachista HOM05D003721 ORTHO05D004303 8.5e-62 242.7 410 41.0
AL4G45430 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 1.1e-61 242.3 264 51.9
CAN.G78.136 Capsicum annuum HOM05D003721 ORTHO05D004303 1.1e-61 242.3 356 45.2
QL04p055909 Quercus lobata HOM05D003721 ORTHO05D004303 1.5e-61 241.9 704 31.7
TPR.G18168 Trifolium pratense HOM05D003721 ORTHO05D004303 1.5e-61 241.9 261 53.6
Lj7A506T70 Lonicera japonica HOM05D003721 ORTHO05D004303 1.9e-61 241.5 330 47.6
Ciclev10018933m.g Citrus clementina HOM05D003721 ORTHO05D004303 2.5e-61 241.1 261 53.3
Gohir.A12G106100 Gossypium hirsutum HOM05D003721 ORTHO05D004303 3.2e-61 240.7 333 45.9
Sopen01g039000 Solanum pennellii HOM05D003721 ORTHO05D004303 3.2e-61 240.7 357 45.4
BcaC07g40669 Brassica carinata HOM05D003721 ORTHO05D004303 4.2e-61 240.4 264 50.8
C08p36410 Brassica napus HOM05D003721 ORTHO05D004303 4.2e-61 240.4 264 50.8
BolC8t51224H Brassica oleracea HOM05D003721 ORTHO05D004303 4.2e-61 240.4 264 50.8
CANSAT94G0013 Cannabis sativa HOM05D003721 ORTHO05D004303 4.2e-61 240.4 776 32.9
Sp5g32820 Schrenkiella parvula HOM05D003721 ORTHO05D004303 4.2e-61 240.4 262 52.3
SalBow3G1665 Salvia bowleyana HOM05D003721 ORTHO05D004303 5.5e-61 240.0 333 46.8
A09p53630 Brassica napus HOM05D003721 ORTHO05D004303 1.2e-60 238.8 264 50.4
BraA09t40785Z Brassica rapa HOM05D003721 ORTHO05D004303 1.6e-60 238.4 264 50.4
MSTRG.20868 Avicennia marina HOM05D003721 ORTHO05D004303 2.7e-60 237.7 339 46.3
Medtr7g079200 Medicago truncatula HOM05D003721 ORTHO05D004303 2.7e-60 237.7 318 45.3
Gorai.008G119300 Gossypium raimondii HOM05D003721 ORTHO05D004303 3.6e-60 237.3 263 51.3
CSS0014201 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 6.1e-60 236.5 761 30.1
Thhalv10005812m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 8.0e-60 236.1 279 49.1
CSS0042065 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 1.0e-59 235.7 747 32.3
A07p25580 Brassica napus HOM05D003721 ORTHO05D004303 2.3e-59 234.6 259 52.5
BraA07t30199Z Brassica rapa HOM05D003721 ORTHO05D004303 2.3e-59 234.6 259 52.5
FAN03G0785 Fragaria x ananassa HOM05D003721 ORTHO05D004303 3.0e-59 234.2 725 31.3
unitig_52.g17061 Utricularia gibba HOM05D003721 ORTHO05D004303 3.0e-59 234.2 281 47.7
Prupe.2G178900 Prunus persica HOM05D003721 ORTHO05D004303 4.0e-59 233.8 387 43.4
Sp5g01840 Schrenkiella parvula HOM05D003721 ORTHO05D004303 5.2e-59 233.4 279 48.7
AL5G43940 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 8.8e-59 232.6 270 50.4
arahy.Tifrunner.gnm1.ann1.M56506 Arachis hypogaea HOM05D003721 ORTHO05D004303 8.8e-59 232.6 378 42.9
Aa31LG1G27570 Aethionema arabicum HOM05D003721 ORTHO05D004303 1.2e-58 232.3 265 51.7
C06p27570 Brassica napus HOM05D003721 ORTHO05D004303 1.2e-58 232.3 264 50.0
CsaV3_6G000920 Cucumis sativus L. HOM05D003721 ORTHO05D004303 1.2e-58 232.3 338 46.2
FAN06G4946 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.5e-58 231.9 341 44.3
arahy.Tifrunner.gnm1.ann1.QXLJ4L Arachis hypogaea HOM05D003721 ORTHO05D004303 2.0e-58 231.5 382 42.4
Ah.05g180090 Amaranthus hybridus HOM05D003721 ORTHO05D004303 3.4e-58 230.7 275 48.4
Carub.0004s2886 Capsella rubella HOM05D003721 ORTHO05D004303 3.4e-58 230.7 268 49.6
AT3G61570 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 4.4e-58 230.3 261 50.6
MELO3C021177.2 Cucumis melo HOM05D003721 ORTHO05D004303 4.4e-58 230.3 338 46.7
PGSC0003DMG400000197 Solanum tuberosum HOM05D003721 ORTHO05D004303 5.7e-58 229.9 340 46.8
Migut.B01806 Erythranthe guttata HOM05D003721 ORTHO05D004303 9.7e-58 229.2 339 43.7
HanXRQChr06g0166991 Helianthus annuus HOM05D003721 ORTHO05D004303 1.3e-57 228.8 264 50.0
BolC6t37925H Brassica oleracea HOM05D003721 ORTHO05D004303 2.2e-57 228.0 261 49.8
Gorai.007G104100 Gossypium raimondii HOM05D003721 ORTHO05D004303 2.2e-57 228.0 264 50.4
ClCG06G003380 Citrullus lanatus HOM05D003721 ORTHO05D004303 3.7e-57 227.3 263 54.0
Thhalv10001332m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 4.8e-57 226.9 262 49.6
FAN10G1929 Fragaria x ananassa HOM05D003721 ORTHO05D004303 4.8e-57 226.9 725 30.6
BcaB02g07370 Brassica carinata HOM05D003721 ORTHO05D004303 8.3e-57 226.1 268 48.9
FvH4_7g15532 Fragaria vesca HOM05D003721 ORTHO05D004303 3.1e-56 224.2 749 30.2
Ca_03491_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 5.3e-56 223.4 341 43.7
Nitab4.5_0003501g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 9.1e-56 222.6 353 43.6
FAN10G1794 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.2e-55 222.2 725 30.6
RcHm_v2.0_Chr1g0357861 Rosa chinensis HOM05D003721 ORTHO05D004303 2.0e-55 221.5 750 30.1
BcaC08g45136 Brassica carinata HOM05D003721 ORTHO05D004303 2.7e-55 221.1 253 51.0
Solyc01g095210.3 Solanum lycopersicum HOM05D003721 ORTHO05D004303 3.5e-55 220.7 757 30.8
Sed0002636 Sechium edule HOM05D003721 ORTHO05D004303 1.3e-54 218.8 303 47.9
FAN06G3247 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.7e-54 218.4 753 29.6
Glyma.16G030600 Glycine max HOM05D003721 ORTHO05D004303 1.7e-54 218.4 776 30.0
MD01G1072600 Malus domestica HOM05D003721 ORTHO05D004303 2.5e-53 214.5 335 43.3
vmacro13221 Vaccinium macrocarpon HOM05D003721 ORTHO05D004303 1.8e-51 208.4 393 39.7
BcaC07g40653 Brassica carinata HOM05D003721 ORTHO05D004303 8.8e-51 206.1 674 30.4
THA.LOC104817323 Tarenaya hassleriana HOM05D003721 ORTHO05D004303 7.5e-50 203.0 324 42.3
AagrBONN_evm.TU.Sc2ySwM_369.3 Anthoceros agrestis HOM05D003721 ORTHO05D004303 1.7e-49 201.8 310 40.3
BcaC07g42682 Brassica carinata HOM05D003721 ORTHO05D004303 1.3e-46 192.2 246 47.6
QL01p002178 Quercus lobata HOM05D003721 ORTHO05D004303 8.9e-43 179.5 293 42.0
Lsat_1_v5_gn_3_138600 Lactuca sativa HOM05D003721 ORTHO05D004303 3.7e-41 174.1 681 28.3
BcaC07g40657 Brassica carinata HOM05D003721 ORTHO05D004303 2.3e-38 164.9 259 42.5
Psat3g105680 Pisum sativum HOM05D003721 ORTHO05D004303 3.9e-38 164.1 228 42.5
Oeu010635.1 Olea europaea HOM05D003721 ORTHO05D004303 8.9e-35 152.9 393 33.3
Haze_15579 Corylus avellana HOM05D003721 ORTHO05D004303 8.3e-33 146.4 157 55.4
BcaC07g42673 Brassica carinata HOM05D003721 ORTHO05D004303 1.2e-31 142.5 675 27.4
Gohir.D11G097866 Gossypium hirsutum HOM05D003721 ORTHO05D004303 2.5e-29 134.8 222 40.5
Haze_15575 Corylus avellana HOM05D003721 ORTHO05D004303 6.8e-27 126.7 204 39.7
Haze_15580 Corylus avellana HOM05D003721 ORTHO05D004303 1.5e-26 125.6 204 39.2
Actinidia37722 Actinidia chinensis HOM05D003721 ORTHO05D004074 4.6e-23 114.0 137 47.4
Haze_15574 Corylus avellana HOM05D003721 ORTHO05D004303 6.0e-23 113.6 137 51.1
MCO16G164 Micromonas commoda HOM05D003721 ORTHO05D004303 2.3e-19 101.7 277 32.9
TPR.G35781 Trifolium pratense HOM05D003721 ORTHO05D004303 1.5e-18 99.0 184 35.3
CBR_g40304 Chara braunii HOM05D001539 ORTHO05D000937 6.4e-17 93.6 164 39.0
SGA_v2.0_scaffold4G02274 Striga asiatica HOM05D003721 ORTHO05D004303 5.6e-13 80.5 182 38.5
Cre12.g495800 Chlamydomonas reinhardtii HOM05D003721 ORTHO05D004303 7.3e-13 80.1 246 29.7
arahy.Tifrunner.gnm1.ann1.LL4IHI Arachis hypogaea HOM05D003721 ORTHO05D004303 3.6e-12 77.8 139 38.1
Actinidia10078 Actinidia chinensis HOM05D003721 ORTHO05D004303 3.1e-11 74.7 123 42.3
Actinidia21288 Actinidia chinensis HOM05D003721 ORTHO05D004303 7.6e-10 70.1 67 55.2
BcaC08g45231 Brassica carinata HOM05D003721 ORTHO05D004303 1.6e-07 62.4 124 37.1


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