Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 0.0e+00 1222.2 983 100.0
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 1.2e-186 657.9 1012 71.4
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 1.5e-56 225.7 720 64.2
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 5.3e-49 200.7 796 59.9
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 4.2e-46 191.0 280 39.3
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.8e-42 178.3 249 41.4
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 3.7e-42 177.9 271 42.1
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 6.3e-42 177.2 249 41.4
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 1.1e-41 176.4 249 41.4
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.1e-41 176.4 249 41.4
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 2.4e-41 175.3 245 41.2
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 2.4e-41 175.3 272 42.6
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 3.1e-41 174.9 271 41.7
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 3.1e-41 174.9 245 41.2
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 4.1e-41 174.5 268 38.1
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 5.3e-41 174.1 270 40.4
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 6.9e-41 173.7 247 40.9
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 9.1e-41 173.3 245 40.8
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 9.1e-41 173.3 250 41.6
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 9.1e-41 173.3 271 41.0
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 1.2e-40 172.9 249 43.0
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 1.5e-40 172.6 253 43.9
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 5.9e-40 170.6 240 42.9
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 7.7e-40 170.2 272 41.2
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 1.0e-39 169.9 245 40.4
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 1.0e-39 169.9 721 61.4
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 1.7e-39 169.1 238 43.3
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 2.9e-39 168.3 270 42.2
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 2.9e-39 168.3 271 39.5
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 2.9e-39 168.3 276 39.9
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 3.8e-39 167.9 247 41.3
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 5.0e-39 167.5 271 41.0
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 5.0e-39 167.5 247 42.1
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 6.5e-39 167.2 271 38.0
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 8.5e-39 166.8 238 42.9
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 8.5e-39 166.8 265 41.9
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 1.1e-38 166.4 268 42.5
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 1.1e-38 166.4 276 38.8
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 1.1e-38 166.4 240 40.8
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 1.4e-38 166.0 237 43.0
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 1.4e-38 166.0 271 41.0
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 1.4e-38 166.0 247 41.3
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 1.9e-38 165.6 240 40.4
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 1.9e-38 165.6 272 39.7
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 1.9e-38 165.6 271 40.6
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 1.9e-38 165.6 247 41.7
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 2.5e-38 165.2 247 42.9
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 3.2e-38 164.9 241 43.6
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 3.2e-38 164.9 269 40.5
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 4.2e-38 164.5 240 42.5
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 7.2e-38 163.7 238 40.3
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 7.2e-38 163.7 239 41.0
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 7.2e-38 163.7 261 39.5
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 9.4e-38 163.3 272 39.3
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 1.6e-37 162.5 263 40.3
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 1.6e-37 162.5 272 39.7
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 2.1e-37 162.2 255 38.4
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 3.6e-37 161.4 232 42.7
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 4.7e-37 161.0 255 38.0
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 6.1e-37 160.6 249 41.4
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 1.0e-36 159.8 238 42.0
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 3.0e-36 158.3 272 38.2
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 3.9e-36 157.9 265 40.8
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 5.2e-36 157.5 269 38.7
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 5.2e-36 157.5 237 43.0
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 6.7e-36 157.1 238 39.9
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 6.7e-36 157.1 247 40.1
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 6.7e-36 157.1 269 38.3
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 8.8e-36 156.8 269 39.4
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 8.8e-36 156.8 305 36.7
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 1.5e-35 156.0 263 39.9
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 1.5e-35 156.0 242 43.8
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 2.0e-35 155.6 240 39.6
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 5.7e-35 154.1 234 43.2
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 7.4e-35 153.7 274 38.3
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 2.8e-34 151.8 270 35.9
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 4.8e-34 151.0 301 37.2
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 8.2e-34 150.2 254 39.0
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 2.4e-33 148.7 278 37.8
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 3.1e-33 148.3 278 37.4
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 4.1e-33 147.9 240 39.6
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 5.3e-33 147.5 244 38.1
BcaNung04307 Brassica carinata HOM05D005996 ORTHO05D007507 5.3e-33 147.5 247 39.3
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 7.0e-33 147.1 278 37.1
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 9.1e-33 146.7 278 37.1
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 9.1e-33 146.7 278 37.1
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 1.2e-32 146.4 271 34.7
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 1.6e-32 146.0 244 37.7
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 2.0e-32 145.6 248 38.7
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 7.7e-32 143.7 275 36.7
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 7.7e-32 143.7 280 36.8
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 1.9e-30 139.0 230 40.0
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 3.2e-30 138.3 210 41.0
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 1.2e-29 136.3 239 36.0
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 1.2e-29 136.3 248 38.3
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 2.7e-29 135.2 242 40.9
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 4.7e-29 134.4 303 34.3
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 1.8e-28 132.5 301 34.6
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 1.5e-27 129.4 309 33.7
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 2.4e-25 122.1 206 39.3
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 5.3e-25 120.9 158 43.7
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 1.3e-23 116.3 174 39.7
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 6.5e-23 114.0 673 56.3
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 3.4e-19 101.7 129 42.6
SEGI_22573 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 1.2e-16 93.2 129 41.9
CDE09G0218 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 1.3e-15 89.7 128 46.9
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 3.8e-15 88.2 147 32.7
Nitab4.5_0000980g0280 Nicotiana tabacum HOM05D005996 ORTHO05D007507 6.5e-15 87.4 121 41.3
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 1.5e-14 86.3 119 39.5
CARHR243120 Cardamine hirsuta HOM05D005996 ORTHO05D007507 2.5e-14 85.5 99 42.4
TWI75G0933 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 4.2e-14 84.7 97 41.2
ATR0913G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 1.2e-13 83.2 101 42.6
MCO09G858 Micromonas commoda HOM05D005996 ORTHO05D007507 6.1e-13 80.9 254 28.3
TAR628G0048 Trochodendron aralioides HOM05D005996 ORTHO05D007507 8.0e-13 80.5 101 39.6
PGSC0003DMG400001599 Solanum tuberosum HOM05D005996 ORTHO05D007507 1.4e-12 79.7 97 38.1
MBI09_g44523_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 8.8e-12 77.0 115 40.0
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 1.2e-11 76.6 137 33.6
Zm00001eb027100 Zea mays HOM05D005996 ORTHO05D007507 2.6e-11 75.5 101 36.6
CDE09G0259 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 2.8e-10 72.0 100 36.0
ATR0074G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 2.0e-08 65.9 107 39.3
CDE09G0530 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 4.5e-08 64.7 89 36.0
Hma1.2p1_0032F.1_g019730 Hydrangea macrophylla HOM05D005996 ORTHO05D007507 7.8e-08 63.9 68 45.6


User provided reference genes

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