Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_13310 Physcomitrium patens HOM05D032631 ORTHO05D310607 1.1e-59 233.0 114 100.0
Pp3c2_4080 Physcomitrium patens HOM05D032631 ORTHO05D317326 4.5e-08 61.6 89 43.8
RcHm_v2.0_Chr3g0450381 Rosa chinensis HOM05D000017 ORTHO05D000013 1.7e-07 59.7 94 31.9
Pp3c2_4340 Physcomitrium patens HOM05D032631 ORTHO05D315391 3.8e-07 58.5 83 38.6
VMungo0540G2177 Vigna mungo HOM05D000017 ORTHO05D000013 3.8e-07 58.5 94 30.9
PGR142G3099 Punica granatum HOM05D000017 ORTHO05D000013 4.9e-07 58.2 94 31.9
Lj5g0003322 Lotus japonicus HOM05D000017 ORTHO05D000013 1.1e-06 57.0 108 29.6
CSS0046257 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.4e-06 56.6 94 29.8
Solyc01g097030.3 Solanum lycopersicum HOM05D000017 ORTHO05D000013 1.4e-06 56.6 94 29.8
Sopen01g040720 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 56.6 94 29.8
Atru.chr2.859 Acer truncatum HOM05D000017 ORTHO05D000013 1.9e-06 56.2 94 29.8
MSTRG.20465 Avicennia marina HOM05D000017 ORTHO05D000013 1.9e-06 56.2 94 29.8
FvH4_6g02501 Fragaria vesca HOM05D000017 ORTHO05D000013 1.9e-06 56.2 94 29.8
CSS0038116 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.4e-06 55.8 94 28.7
Eucgr.H04264 Eucalyptus grandis HOM05D000017 ORTHO05D000013 2.4e-06 55.8 94 29.8
Lalb_Chr02g0148951 Lupinus albus HOM05D000017 ORTHO05D000013 2.4e-06 55.8 94 29.8
MD12G1244100 Malus domestica HOM05D000017 ORTHO05D000013 2.4e-06 55.8 94 29.8
Oeu016452.1 Olea europaea HOM05D000017 ORTHO05D000013 2.4e-06 55.8 94 28.7
Prupe.6G346500 Prunus persica HOM05D000017 ORTHO05D000013 2.4e-06 55.8 94 29.8
TPR.G21820 Trifolium pratense HOM05D000017 ORTHO05D000013 2.4e-06 55.8 94 29.8
Duzib106G1298 Durio zibethinus HOM05D000017 ORTHO05D000013 3.2e-06 55.5 94 29.8
Sabra19G0017600 Salix brachista HOM05D000017 ORTHO05D000013 3.2e-06 55.5 94 29.8
Sabra19G0024700 Salix brachista HOM05D000017 ORTHO05D000013 3.2e-06 55.5 94 29.8
CANSAT78G1724 Cannabis sativa HOM05D000017 ORTHO05D000013 4.2e-06 55.1 94 33.0
Dinv20264 Davidia involucrata HOM05D000017 ORTHO05D000013 4.2e-06 55.1 94 28.7
Duzib212G0997 Durio zibethinus HOM05D000017 ORTHO05D000013 4.2e-06 55.1 94 34.0
Lalb_Chr04g0261821 Lupinus albus HOM05D000017 ORTHO05D000013 4.2e-06 55.1 94 26.6
QL03p028447 Quercus lobata HOM05D000017 ORTHO05D000013 4.2e-06 55.1 94 29.8
Sabra13G0039600 Salix brachista HOM05D000017 ORTHO05D000013 4.2e-06 55.1 94 28.7
Sp3g03450 Schrenkiella parvula HOM05D000017 ORTHO05D000013 4.2e-06 55.1 94 30.9
CBR_g4374 Chara braunii HOM05D000017 ORTHO05D000013 5.5e-06 54.7 94 34.0
PSO063G4709 Papaver somniferum HOM05D000017 ORTHO05D000013 5.5e-06 54.7 94 33.0
Rhsim13G0031700 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.5e-06 54.7 94 30.9
TPR.G21821 Trifolium pratense HOM05D000017 ORTHO05D000013 5.5e-06 54.7 94 29.8
Actinidia17463 Actinidia chinensis HOM05D000017 ORTHO05D000013 7.1e-06 54.3 94 28.7
A01p40780 Brassica napus HOM05D000017 ORTHO05D000013 7.1e-06 54.3 94 30.9
BNapus_Darmor_BZH_scaffold_78p00930 Brassica napus HOM05D000017 ORTHO05D000013 7.1e-06 54.3 94 30.9
C03p40920 Brassica napus HOM05D000017 ORTHO05D000013 7.1e-06 54.3 94 29.8
Ciclev10027875m.g Citrus clementina HOM05D000017 ORTHO05D000013 7.1e-06 54.3 94 28.7
Duzib128G0336 Durio zibethinus HOM05D000017 ORTHO05D000013 7.1e-06 54.3 94 28.7
Hma1.2p1_1123F.1_g259310 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.1e-06 54.3 101 31.7
MD10G1190900 Malus domestica HOM05D000017 ORTHO05D000013 7.1e-06 54.3 129 27.9
PGR004G0002 Punica granatum HOM05D000017 ORTHO05D000013 7.1e-06 54.3 94 28.7
Gorai.007G278900 Gossypium raimondii HOM05D000017 ORTHO05D000013 9.3e-06 53.9 94 28.7
Lj1g0001980 Lotus japonicus HOM05D000017 ORTHO05D000013 9.3e-06 53.9 94 28.7
Oeu038469.1 Olea europaea HOM05D000017 ORTHO05D000013 9.3e-06 53.9 94 28.7
Prupe.8G229900 Prunus persica HOM05D000017 ORTHO05D000013 9.3e-06 53.9 94 28.7
SHI31358 Sapria himalayana HOM05D000017 ORTHO05D000013 9.3e-06 53.9 94 28.7


User provided reference genes

Program Settings