Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 4.3e-184 647.9 327 100.0
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.0e-124 450.7 314 72.3
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 1.4e-70 270.8 309 46.9
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 2.6e-64 250.0 313 45.4
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 3.4e-64 249.6 312 43.9
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 5.5e-62 242.3 316 41.8
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 2.1e-61 240.4 309 43.7
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 2.1e-61 240.4 309 43.7
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 6.7e-60 235.3 313 41.9
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 8.7e-60 235.0 303 41.6
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 4.3e-59 232.6 323 41.2
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 7.4e-59 231.9 313 41.5
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 1.3e-58 231.1 323 40.9
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 1.3e-58 231.1 323 41.2
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 2.8e-58 229.9 296 42.9
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 3.7e-58 229.6 310 40.6
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 4.8e-58 229.2 312 41.7
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 8.1e-58 228.4 314 42.0
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 8.1e-58 228.4 337 38.3
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 1.1e-57 228.0 305 41.3
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 1.4e-57 227.6 303 42.2
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 1.8e-57 227.3 314 41.7
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 3.1e-57 226.5 318 42.5
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 3.1e-57 226.5 314 41.1
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 4.0e-57 226.1 314 42.4
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 4.0e-57 226.1 313 42.5
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 5.3e-57 225.7 317 42.0
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 5.3e-57 225.7 313 41.5
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 1.2e-56 224.6 314 41.1
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 1.5e-56 224.2 314 41.4
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 1.5e-56 224.2 312 40.7
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 2.0e-56 223.8 314 41.7
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 4.5e-56 222.6 311 40.8
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 5.8e-56 222.2 312 40.1
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 7.6e-56 221.9 313 41.2
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 7.6e-56 221.9 313 41.2
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 7.6e-56 221.9 312 44.2
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 1.0e-55 221.5 315 41.6
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 2.2e-55 220.3 304 41.4
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 2.2e-55 220.3 307 40.1
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 2.9e-55 219.9 311 40.5
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 3.8e-55 219.5 335 40.6
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 8.4e-55 218.4 304 40.8
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 8.4e-55 218.4 314 39.2
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 8.4e-55 218.4 302 39.7
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 1.1e-54 218.0 310 40.6
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 1.9e-54 217.2 309 41.4
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 1.9e-54 217.2 301 39.9
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 2.5e-54 216.9 321 39.6
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 3.2e-54 216.5 308 40.6
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 5.5e-54 215.7 307 40.4
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 5.5e-54 215.7 301 41.2
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 7.1e-54 215.3 311 39.9
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 7.1e-54 215.3 302 41.7
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 1.2e-53 214.5 322 39.8
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 1.2e-53 214.5 317 38.5
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 1.6e-53 214.2 315 40.0
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 1.6e-53 214.2 322 39.4
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 2.1e-53 213.8 307 41.0
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 3.5e-53 213.0 318 37.1
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 3.5e-53 213.0 311 41.2
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 6.0e-53 212.2 302 38.7
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 1.8e-52 210.7 304 40.1
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 2.3e-52 210.3 303 40.3
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 1.1e-51 208.0 307 37.8
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 1.1e-51 208.0 301 39.9
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 1.1e-51 208.0 324 38.0
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 1.9e-51 207.2 313 39.3
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 3.3e-51 206.5 320 40.9
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 4.3e-51 206.1 305 37.7
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 4.3e-51 206.1 311 38.3
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 5.7e-51 205.7 316 38.0
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 5.7e-51 205.7 307 39.7
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 7.4e-51 205.3 293 41.3
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 9.6e-51 204.9 332 39.2
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 1.3e-50 204.5 319 38.6
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.8e-50 203.4 291 40.2
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 3.7e-50 203.0 360 36.7
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 4.8e-50 202.6 294 38.4
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 1.4e-49 201.1 313 37.4
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 1.4e-49 201.1 314 37.3
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.8e-49 200.7 320 39.1
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 3.1e-49 199.9 301 40.5
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 5.3e-49 199.1 308 39.3
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 2.0e-48 197.2 308 39.3
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 2.0e-48 197.2 308 39.3
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 2.0e-48 197.2 303 37.3
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 1.0e-47 194.9 318 37.1
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 1.7e-47 194.1 304 37.5
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 1.7e-47 194.1 307 38.4
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 2.2e-47 193.7 310 37.4
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 6.5e-47 192.2 307 38.1
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 8.4e-47 191.8 324 38.9
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 8.4e-47 191.8 294 36.7
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 1.1e-46 191.4 270 40.4
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 1.1e-46 191.4 270 40.4
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.4e-46 191.0 225 44.0
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.9e-46 190.7 312 38.5
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 2.5e-46 190.3 265 41.1
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 2.5e-46 190.3 265 41.1
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 2.5e-46 190.3 225 44.4
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 1.6e-45 187.6 308 39.9
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 2.3e-44 183.7 290 39.0
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 3.0e-44 183.3 316 36.1
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 3.0e-44 183.3 343 35.0
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 1.9e-43 180.6 298 36.6
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 2.5e-43 180.3 315 36.5
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 7.4e-43 178.7 299 37.8
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 2.2e-42 177.2 298 36.2
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 2.8e-42 176.8 320 34.1
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 4.8e-42 176.0 354 33.6
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 1.1e-41 174.9 310 34.8
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 1.8e-41 174.1 266 40.6
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 1.8e-41 174.1 311 34.7
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 2.4e-41 173.7 314 32.8
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 3.1e-41 173.3 295 32.9
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 5.3e-41 172.6 296 35.5
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 9.0e-41 171.8 317 35.0
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 1.5e-40 171.0 297 34.3
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 2.0e-40 170.6 307 34.2
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 2.6e-40 170.2 323 36.2
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 3.4e-40 169.9 202 43.6
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 1.7e-39 167.5 235 38.7
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 2.2e-39 167.2 299 33.8
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 5.0e-39 166.0 296 34.5
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 3.2e-38 163.3 310 34.8
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 5.5e-38 162.5 297 33.0
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 7.2e-38 162.2 320 33.4
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 1.4e-36 157.9 313 34.2
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 4.3e-35 152.9 218 36.7
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 4.8e-34 149.4 184 41.3
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.2e-29 134.8 320 31.9
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.6e-29 134.4 243 38.7
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 1.0e-28 131.7 216 37.0
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 4.8e-26 122.9 302 30.8
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 5.9e-24 115.9 264 33.0
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 7.7e-24 115.5 296 28.7
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 6.5e-23 112.5 191 34.0
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 7.2e-22 109.0 141 39.7
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-21 108.2 184 32.6
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 8.0e-21 105.5 275 33.1
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 4.0e-20 103.2 109 50.5
Cre03.g177900 Chlamydomonas reinhardtii HOM05D004681 ORTHO05D005541 4.8e-18 96.3 323 27.2
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 1.6e-16 91.3 115 41.7
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.6e-16 91.3 113 38.1
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 2.0e-16 90.9 282 27.7
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 4.5e-16 89.7 228 32.5
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 4.2e-14 83.2 192 34.4
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 2.7e-13 80.5 189 30.2
MCO15G325 Micromonas commoda HOM05D004681 ORTHO05D005541 4.7e-13 79.7 341 26.1
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 7.5e-11 72.4 78 46.2
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 9.1e-09 65.5 169 32.5
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 3.5e-08 63.5 154 29.9


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