Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 8.4e-210 733.4 364 100.0
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 9.7e-81 304.7 281 50.5
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 9.4e-60 235.0 313 36.7
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 2.6e-54 216.9 300 37.3
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 2.6e-54 216.9 293 37.9
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 2.6e-54 216.9 293 39.6
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 7.7e-54 215.3 291 37.8
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 1.0e-53 214.9 289 36.7
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 1.0e-53 214.9 289 36.7
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 1.3e-53 214.5 289 36.0
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 1.7e-53 214.2 313 34.5
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 6.5e-53 212.2 289 35.6
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 6.5e-53 212.2 289 36.3
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 8.5e-53 211.8 293 37.5
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 1.9e-52 210.7 289 35.3
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 2.5e-52 210.3 293 36.5
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 7.2e-52 208.8 297 37.0
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 2.1e-51 207.2 306 34.0
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 2.1e-51 207.2 284 36.3
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 2.1e-51 207.2 300 35.0
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 2.7e-51 206.8 298 36.9
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 2.7e-51 206.8 300 36.0
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 2.7e-51 206.8 293 37.2
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 3.6e-51 206.5 300 37.3
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 3.6e-51 206.5 298 36.9
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 6.1e-51 205.7 291 37.1
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 6.1e-51 205.7 291 37.1
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 1.4e-50 204.5 293 36.9
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 1.8e-50 204.1 301 35.2
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 1.8e-50 204.1 293 35.5
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 1.8e-50 204.1 300 37.3
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.8e-50 204.1 293 35.8
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 2.3e-50 203.8 289 35.6
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 3.0e-50 203.4 289 35.6
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 3.0e-50 203.4 298 36.6
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 4.0e-50 203.0 289 35.6
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 4.0e-50 203.0 295 35.6
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 6.8e-50 202.2 295 34.9
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 1.2e-49 201.4 297 36.7
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 1.5e-49 201.1 300 36.3
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 1.5e-49 201.1 293 34.5
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 2.0e-49 200.7 293 35.8
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 2.0e-49 200.7 300 35.0
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 2.6e-49 200.3 291 35.7
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 4.4e-49 199.5 294 34.7
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 5.7e-49 199.1 301 36.2
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 5.7e-49 199.1 293 33.8
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 9.8e-49 198.4 293 34.8
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 1.3e-48 198.0 297 36.4
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 1.7e-48 197.6 308 34.4
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 2.2e-48 197.2 293 34.1
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 2.2e-48 197.2 293 34.5
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 4.8e-48 196.1 301 34.2
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 6.3e-48 195.7 293 35.8
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 6.3e-48 195.7 299 35.8
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 8.3e-48 195.3 291 36.4
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.1e-47 194.9 299 35.5
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 1.8e-47 194.1 293 33.8
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 2.4e-47 193.7 299 35.5
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.4e-47 193.7 301 35.5
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.4e-47 193.7 299 35.5
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 3.1e-47 193.4 302 34.1
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.1e-47 193.4 299 35.5
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 4.1e-47 193.0 291 35.4
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 4.1e-47 193.0 302 35.8
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 4.1e-47 193.0 298 34.6
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 5.4e-47 192.6 299 35.1
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 9.1e-47 191.8 293 34.1
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 9.1e-47 191.8 306 34.6
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 1.6e-46 191.0 286 37.1
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 2.7e-46 190.3 291 35.7
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 2.7e-46 190.3 297 34.3
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 4.5e-46 189.5 339 32.2
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 5.9e-46 189.1 292 35.6
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 1.0e-45 188.3 296 34.5
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 1.3e-45 188.0 291 34.4
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 2.9e-45 186.8 301 33.6
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 8.5e-45 185.3 297 32.0
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 3.2e-44 183.3 286 35.0
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 1.2e-43 181.4 338 33.7
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 1.2e-43 181.4 292 34.6
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 1.6e-43 181.0 295 31.9
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 3.6e-43 179.9 260 39.2
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 6.1e-43 179.1 298 32.9
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.5e-41 174.5 293 32.4
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 9.8e-41 171.8 231 39.0
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 2.0e-38 164.1 232 36.2
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 2.0e-38 164.1 346 29.5
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 7.7e-38 162.2 300 32.7
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 4.2e-36 156.4 237 33.8
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 2.1e-35 154.1 298 30.2
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 4.7e-35 152.9 338 29.6
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 8.0e-35 152.1 235 36.6
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 1.0e-34 151.8 300 31.3
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 4.0e-34 149.8 414 26.6
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.2e-33 148.3 259 35.5
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 4.4e-33 146.4 259 35.1
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 4.4e-33 146.4 242 33.9
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.6e-30 137.9 234 33.8
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 6.6e-29 132.5 231 33.8
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 2.3e-26 124.0 212 32.1
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 8.3e-24 115.5 258 27.5
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 8.6e-21 105.5 234 30.8
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 1.9e-20 104.4 165 31.5
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 2.0e-17 94.4 107 38.3
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 4.4e-09 66.6 99 39.4
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 7.1e-07 59.3 65 35.4
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 4.6e-06 56.6 60 35.0
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 4.6e-06 56.6 60 35.0


User provided reference genes

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