Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_10600 Physcomitrium patens HOM05D003910 ORTHO05D004622 6.6e-271 936.8 482 100.0
Pp3c4_13690 Physcomitrium patens HOM05D003910 ORTHO05D004622 1.1e-220 770.0 433 90.5
SMO147G0120 Selaginella moellendorffii HOM05D003910 ORTHO05D004622 2.0e-182 642.9 381 83.7
AagrBONN_evm.TU.Sc2ySwM_117.3949 Anthoceros agrestis HOM05D003910 ORTHO05D004622 3.4e-182 642.1 421 77.7
Mapoly0065s0095 Marchantia polymorpha HOM05D003910 ORTHO05D004622 4.3e-177 625.2 391 81.1
Os06g0704600 Oryza sativa ssp. japonica HOM05D003910 ORTHO05D004622 2.3e-170 602.8 389 77.6
Zm00001eb227310 Zea mays HOM05D003910 ORTHO05D004622 2.3e-170 602.8 361 82.0
Nn4g23592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 6.2e-168 594.7 369 78.9
ATR0691G248 Amborella trichopoda HOM05D003910 ORTHO05D004622 2.9e-165 585.9 407 73.0
Haze_17499 Corylus avellana HOM05D003910 ORTHO05D004622 4.9e-165 585.1 361 78.7
Solyc08g069030.4 Solanum lycopersicum HOM05D003910 ORTHO05D004622 1.4e-164 583.6 363 78.0
Cfa018581 Carpinus fangiana HOM05D003910 ORTHO05D004622 3.2e-164 582.4 376 76.3
Dinv27301 Davidia involucrata HOM05D003910 ORTHO05D004622 7.1e-164 581.3 368 77.7
Ah.15g093760 Amaranthus hybridus HOM05D003910 ORTHO05D004622 1.6e-163 580.1 382 75.9
PGSC0003DMG400029545 Solanum tuberosum HOM05D003910 ORTHO05D004622 1.6e-163 580.1 363 77.4
CAN.G908.4 Capsicum annuum HOM05D003910 ORTHO05D004622 2.7e-163 579.3 376 75.5
CiPaw.16G066200 Carya illinoinensis HOM05D003910 ORTHO05D004622 2.7e-163 579.3 360 78.3
SGA_v2.0_scaffold52G18960 Striga asiatica HOM05D003910 ORTHO05D004622 2.7e-163 579.3 400 72.8
CDE10G0179 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 4.6e-163 578.6 379 75.7
AUR62019066 Chenopodium quinoa HOM05D003910 ORTHO05D004622 4.6e-163 578.6 396 74.5
AT1G69740 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 1.3e-162 577.0 369 76.7
AUR62014326 Chenopodium quinoa HOM05D003910 ORTHO05D004622 1.3e-162 577.0 396 74.2
MSTRG.25378 Avicennia marina HOM05D003910 ORTHO05D004622 8.7e-162 574.3 392 73.5
AL2G28910 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.1e-161 573.9 369 76.7
Aa31LG11G8660 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.5e-161 573.5 404 71.8
CANSAT25G1111 Cannabis sativa HOM05D003910 ORTHO05D004622 1.9e-161 573.2 413 71.2
THA.LOC104813147 Tarenaya hassleriana HOM05D003910 ORTHO05D004622 3.3e-161 572.4 389 73.3
C06p43500 Brassica napus HOM05D003910 ORTHO05D004622 4.3e-161 572.0 407 70.8
BolC6t39425H Brassica oleracea HOM05D003910 ORTHO05D004622 4.3e-161 572.0 407 70.8
Lj7A342T56 Lonicera japonica HOM05D003910 ORTHO05D004622 9.6e-161 570.9 371 76.3
Sabra05G0135000 Salix brachista HOM05D003910 ORTHO05D004622 1.2e-160 570.5 360 77.2
BcaC08g46419 Brassica carinata HOM05D003910 ORTHO05D004622 1.6e-160 570.1 407 70.5
PSO384G4520 Papaver somniferum HOM05D003910 ORTHO05D004622 2.1e-160 569.7 392 73.0
Gohir.D05G237801 Gossypium hirsutum HOM05D003910 ORTHO05D004622 3.6e-160 568.9 368 75.8
Gorai.009G246200 Gossypium raimondii HOM05D003910 ORTHO05D004622 3.6e-160 568.9 368 75.8
PSO339G3693 Papaver somniferum HOM05D003910 ORTHO05D004622 4.7e-160 568.5 376 75.5
BcaB03g14749 Brassica carinata HOM05D003910 ORTHO05D004622 1.1e-159 567.4 381 73.8
Lsat_1_v5_gn_8_141520 Lactuca sativa HOM05D003910 ORTHO05D004622 1.1e-159 567.4 365 76.7
DCAR_016682 Daucus carota HOM05D003910 ORTHO05D004622 1.4e-159 567.0 397 71.5
Sopen08g022680 Solanum pennellii HOM05D003910 ORTHO05D004622 1.4e-159 567.0 363 76.3
Thecc.08G127500 Theobroma cacao HOM05D003910 ORTHO05D004622 1.4e-159 567.0 368 75.3
Sp5g24850 Schrenkiella parvula HOM05D003910 ORTHO05D004622 1.8e-159 566.6 407 69.8
ECA233G1142 Erigeron canadensis HOM05D003910 ORTHO05D004622 3.1e-159 565.8 376 75.5
Gohir.A05G235500 Gossypium hirsutum HOM05D003910 ORTHO05D004622 3.1e-159 565.8 368 75.3
HanXRQChr17g0559761 Helianthus annuus HOM05D003910 ORTHO05D004622 5.3e-159 565.1 360 76.7
CARHR062800 Cardamine hirsuta HOM05D003910 ORTHO05D004622 6.9e-159 564.7 369 75.3
COL.COLO4_24698 Corchorus olitorius HOM05D003910 ORTHO05D004622 6.9e-159 564.7 379 73.9
EL10Ac1g01030 Beta vulgaris HOM05D003910 ORTHO05D004622 9.0e-159 564.3 381 75.1
Cpa.g.sc64.96 Carica papaya HOM05D003910 ORTHO05D004622 9.0e-159 564.3 392 72.2
MD15G1346700 Malus domestica HOM05D003910 ORTHO05D004622 9.0e-159 564.3 360 76.4
A07p36130 Brassica napus HOM05D003910 ORTHO05D004622 1.2e-158 563.9 409 70.4
Nitab4.5_0000502g0120 Nicotiana tabacum HOM05D003910 ORTHO05D004622 3.4e-158 562.4 363 75.8
Prupe.1G494300 Prunus persica HOM05D003910 ORTHO05D004622 3.4e-158 562.4 371 75.5
Rhsim05G0148200 Rhododendron simsii HOM05D003910 ORTHO05D004622 3.4e-158 562.4 396 72.2
CSS0022256 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 5.8e-158 561.6 377 73.7
MD08G1161600 Malus domestica HOM05D003910 ORTHO05D004622 7.6e-158 561.2 360 75.8
PGR044G2730 Punica granatum HOM05D003910 ORTHO05D004622 7.6e-158 561.2 430 67.9
unitig_46.g18101 Utricularia gibba HOM05D003910 ORTHO05D004622 2.2e-157 559.7 341 79.8
Cc08_g06800 Coffea canephora HOM05D003910 ORTHO05D004622 2.9e-157 559.3 360 76.7
Nitab4.5_0005516g0010 Nicotiana tabacum HOM05D003910 ORTHO05D004622 3.8e-157 558.9 361 75.9
Dinv07208 Davidia involucrata HOM05D003910 ORTHO05D004622 8.4e-157 557.8 379 72.8
Duzib041G0414 Durio zibethinus HOM05D003910 ORTHO05D004622 1.4e-156 557.0 368 74.5
Thhalv10018595m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 1.4e-156 557.0 407 69.3
Medtr3g088610 Medicago truncatula HOM05D003910 ORTHO05D004622 1.9e-156 556.6 367 76.0
Carub.0002s1641 Capsella rubella HOM05D003910 ORTHO05D004622 3.2e-156 555.8 369 74.8
Migut.C01121 Erythranthe guttata HOM05D003910 ORTHO05D004622 7.1e-156 554.7 361 75.6
TAR629G0788 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.1e-155 553.1 361 75.6
BraA07t31189Z Brassica rapa HOM05D003910 ORTHO05D004622 2.7e-155 552.7 407 68.8
Oeu028562.1 Olea europaea HOM05D003910 ORTHO05D004622 3.5e-155 552.4 391 70.8
SalBow7G1186 Salvia bowleyana HOM05D003910 ORTHO05D004622 7.8e-155 551.2 403 69.0
HPP92_019462 Vanilla planifolia HOM05D003910 ORTHO05D004622 2.3e-154 549.7 388 71.6
Lj1g0017187 Lotus japonicus HOM05D003910 ORTHO05D004622 3.0e-154 549.3 360 75.8
Psat5g087720 Pisum sativum HOM05D003910 ORTHO05D004622 1.1e-153 547.4 323 81.4
FAN15G2864 Fragaria x ananassa HOM05D003910 ORTHO05D004622 1.5e-153 547.0 360 75.0
QL09p034136 Quercus lobata HOM05D003910 ORTHO05D004622 1.5e-153 547.0 360 74.2
VMungo1309G0189 Vigna mungo HOM05D003910 ORTHO05D004622 7.3e-153 544.7 360 75.0
Glyma.04G247700 Glycine max HOM05D003910 ORTHO05D004622 9.6e-153 544.3 360 75.0
Phvul.009G127100 Phaseolus vulgaris HOM05D003910 ORTHO05D004622 9.6e-153 544.3 358 74.6
Lalb_Chr08g0241321 Lupinus albus HOM05D003910 ORTHO05D004622 4.8e-152 542.0 363 74.9
Manes.18G078475 Manihot esculenta HOM05D003910 ORTHO05D004622 1.4e-151 540.4 385 70.6
MELO3C008086.2 Cucumis melo HOM05D003910 ORTHO05D004622 1.8e-151 540.0 409 68.5
Lalb_Chr11g0066041 Lupinus albus HOM05D003910 ORTHO05D004622 2.4e-151 539.7 363 73.8
Manes.02G164600 Manihot esculenta HOM05D003910 ORTHO05D004622 3.1e-151 539.3 360 73.6
GSVIVG01008851001 Vitis vinifera HOM05D003910 ORTHO05D004622 3.1e-151 539.3 363 74.4
CsaV3_2G033150 Cucumis sativus L. HOM05D003910 ORTHO05D004622 4.0e-151 538.9 409 68.5
Potri.002G082300 Populus trichocarpa HOM05D003910 ORTHO05D004622 4.0e-151 538.9 360 73.1
Eucgr.F03796 Eucalyptus grandis HOM05D003910 ORTHO05D004622 6.9e-151 538.1 363 73.8
FvH4_2g27170 Fragaria vesca HOM05D003910 ORTHO05D004622 9.0e-151 537.7 360 74.2
FAN20G2211 Fragaria x ananassa HOM05D003910 ORTHO05D004622 9.0e-151 537.7 360 73.9
FAN24G0257 Fragaria x ananassa HOM05D003910 ORTHO05D004622 9.0e-151 537.7 360 74.2
ClCG11G008960 Citrullus lanatus HOM05D003910 ORTHO05D004622 1.2e-150 537.3 368 73.1
Aqoxy3G03785 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 1.5e-150 537.0 379 71.0
FAN27G3176 Fragaria x ananassa HOM05D003910 ORTHO05D004622 2.0e-150 536.6 360 73.9
SEGI_23261 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 2.6e-150 536.2 331 79.8
Ca_16573_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 4.5e-150 535.4 367 73.6
Ca_29570_v3 Cicer arietinum L. HOM05D003910 ORTHO05D004622 4.5e-150 535.4 367 73.6
TWI60G1334 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 4.5e-150 535.4 379 70.2
Sabra02G0064500 Salix brachista HOM05D003910 ORTHO05D004622 5.8e-150 535.0 360 72.8
RcHm_v2.0_Chr6g0296081 Rosa chinensis HOM05D003910 ORTHO05D004622 7.6e-150 534.6 371 72.0
TPR.G16047 Trifolium pratense HOM05D003910 ORTHO05D004622 9.9e-150 534.3 367 73.0
MBI14_g21210_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 1.3e-149 533.9 313 80.2
TWI32G0928 Tripterygium wilfordii HOM05D003910 ORTHO05D004622 1.3e-149 533.9 416 66.1
Sed0003239 Sechium edule HOM05D003910 ORTHO05D004622 2.9e-149 532.7 368 71.5
Ciclev10001195m.g Citrus clementina HOM05D003910 ORTHO05D004622 3.8e-149 532.3 367 72.8
Hma1.2p1_0129F.1_g060300 Hydrangea macrophylla HOM05D003910 ORTHO05D004622 1.1e-148 530.8 397 68.0
Atru.chr13.1495 Acer truncatum HOM05D003910 ORTHO05D004622 1.4e-148 530.4 398 68.3
Duzib116G0657 Durio zibethinus HOM05D003910 ORTHO05D004622 3.2e-148 529.3 365 72.9
SHI34070 Sapria himalayana HOM05D003910 ORTHO05D004622 6.2e-144 515.0 383 67.1
Aqoxy6G02874 Aquilegia oxysepala HOM05D003910 ORTHO05D004622 2.4e-143 513.1 369 69.6
CDE10G1335 Ceratophyllum demersum HOM05D003910 ORTHO05D004622 8.4e-141 504.6 315 79.7
MBI14_g37526_MAGBIO Magnolia biondii HOM05D003910 ORTHO05D004622 8.4e-141 504.6 412 63.6
Peaxi162Scf00288g00822 Petunia axillaris HOM05D003910 ORTHO05D004622 4.6e-139 498.8 363 70.5
arahy.Tifrunner.gnm1.ann1.LMC2LS Arachis hypogaea HOM05D003910 ORTHO05D004622 5.1e-138 495.4 360 70.6
arahy.Tifrunner.gnm1.ann1.YMC104 Arachis hypogaea HOM05D003910 ORTHO05D004622 5.1e-138 495.4 360 70.6
PSO063G2338 Papaver somniferum HOM05D003910 ORTHO05D004622 4.6e-131 472.2 281 80.4
Oeu059440.1 Olea europaea HOM05D003910 ORTHO05D004622 2.3e-130 469.9 361 66.2
MCO01G126 Micromonas commoda HOM05D003910 ORTHO05D004622 1.1e-129 467.6 368 64.7
CARHR035900 Cardamine hirsuta HOM05D003910 ORTHO05D004622 9.0e-127 458.0 350 66.9
Sc16g0000040 Simmondsia chinensis HOM05D003910 ORTHO05D004622 5.0e-125 452.2 303 75.6
Cre02.g091050 Chlamydomonas reinhardtii HOM05D003910 ORTHO05D004622 5.5e-124 448.7 346 64.2
AT1G44318 Arabidopsis thaliana HOM05D003910 ORTHO05D004622 7.9e-123 444.9 351 66.1
PRCOL_00003407 Prasinoderma coloniale HOM05D003910 ORTHO05D004622 1.4e-122 444.1 312 70.5
Carub.0001s3515 Capsella rubella HOM05D003910 ORTHO05D004622 1.8e-122 443.7 349 65.9
Actinidia29473 Actinidia chinensis HOM05D003910 ORTHO05D004622 1.5e-121 440.7 363 65.3
Thhalv10012213m.g Eutrema salsugineum HOM05D003910 ORTHO05D004622 9.7e-121 438.0 397 58.9
Glyma.06G115000 Glycine max HOM05D003910 ORTHO05D004622 4.1e-119 432.6 265 80.4
Sp1g33510 Schrenkiella parvula HOM05D003910 ORTHO05D004622 5.3e-119 432.2 328 66.2
AL1G52270 Arabidopsis lyrata HOM05D003910 ORTHO05D004622 1.2e-118 431.0 348 64.4
BcaC08g42844 Brassica carinata HOM05D003910 ORTHO05D004622 2.0e-118 430.3 328 65.9
C06p00600 Brassica napus HOM05D003910 ORTHO05D004622 2.0e-118 430.3 328 65.9
BcaB07g33952 Brassica carinata HOM05D003910 ORTHO05D004622 2.6e-118 429.9 380 59.5
BraSC36t46049Z Brassica rapa HOM05D003910 ORTHO05D004622 1.3e-117 427.6 328 65.5
BolC6t35193H Brassica oleracea HOM05D003910 ORTHO05D004622 3.8e-117 426.0 349 63.3
A10p07550 Brassica napus HOM05D003910 ORTHO05D004622 6.5e-117 425.2 328 65.2
PSO782G2793 Papaver somniferum HOM05D003910 ORTHO05D004622 7.2e-108 395.2 273 73.3
TPR.G35178 Trifolium pratense HOM05D003910 ORTHO05D004622 6.7e-106 388.7 405 53.6
Aa31LG6G9390 Aethionema arabicum HOM05D003910 ORTHO05D004622 1.5e-100 370.9 280 66.4
Atru.chr12.1381 Acer truncatum HOM05D003910 ORTHO05D004622 2.3e-98 363.6 224 80.8
SGA_v2.0_scaffold24G10456 Striga asiatica HOM05D003910 ORTHO05D004622 1.4e-95 354.4 282 64.9
CSS0027293 Camellia sinensis var. sinensis HOM05D003910 ORTHO05D004622 7.0e-95 352.1 281 68.0
Psat4g053280 Pisum sativum HOM05D003910 ORTHO05D004622 3.2e-79 300.1 216 69.4
CBR_g49534 Chara braunii HOM05D003910 ORTHO05D000048 2.9e-72 276.9 251 62.5
Aa31sc95G130 Aethionema arabicum HOM05D003910 ORTHO05D004622 6.2e-67 259.2 234 59.0
Actinidia03462 Actinidia chinensis HOM05D003910 ORTHO05D004622 6.8e-66 255.8 189 69.3
Haze_27031 Corylus avellana HOM05D003910 ORTHO05D004622 2.1e-62 244.2 294 48.6
Nn3g17592 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.9e-52 211.1 234 50.9
Cfa022049 Carpinus fangiana HOM05D003910 ORTHO05D004622 2.8e-51 207.2 313 40.6
Psat0s476g0040 Pisum sativum HOM05D003910 ORTHO05D004622 2.4e-50 204.1 149 65.8
arahy.Tifrunner.gnm1.ann1.875P1G Arachis hypogaea HOM05D003910 ORTHO05D004622 5.8e-49 199.5 157 63.1
arahy.Tifrunner.gnm1.ann1.YZW1CW Arachis hypogaea HOM05D003910 ORTHO05D004622 4.6e-46 189.9 157 60.5
Psat4g053240 Pisum sativum HOM05D003910 ORTHO05D004622 2.0e-41 174.5 104 81.7
Aa31sc107G70 Aethionema arabicum HOM05D003910 ORTHO05D004622 2.2e-40 171.0 148 61.5
BcaB06g27098 Brassica carinata HOM05D003910 ORTHO05D004622 1.9e-39 167.9 101 76.2
Nn4g23594 Nelumbo nucifera HOM05D003910 ORTHO05D004622 1.9e-39 167.9 100 80.0
arahy.Tifrunner.gnm1.ann1.I497ZX Arachis hypogaea HOM05D003910 ORTHO05D004622 7.1e-39 166.0 153 54.9
arahy.Tifrunner.gnm1.ann1.MAXD3F Arachis hypogaea HOM05D003910 ORTHO05D004622 3.5e-38 163.7 147 57.1
BcaB05g22163 Brassica carinata HOM05D003910 ORTHO05D004622 1.7e-37 161.4 101 73.3
Haze_27000 Corylus avellana HOM05D003910 ORTHO05D004622 6.6e-37 159.5 226 41.2
BcaB04g19319 Brassica carinata HOM05D003910 ORTHO05D004622 1.6e-35 154.8 100 73.0
arahy.Tifrunner.gnm1.ann1.KLV74S Arachis hypogaea HOM05D003910 ORTHO05D004622 4.8e-35 153.3 153 53.6
Oeu059446.1 Olea europaea HOM05D003910 ORTHO05D004622 7.6e-33 146.0 77 83.1
TPR.G20499 Trifolium pratense HOM05D003910 ORTHO05D004622 1.4e-31 141.7 122 62.3
arahy.Tifrunner.gnm1.ann1.FDSF2K Arachis hypogaea HOM05D003910 ORTHO05D004622 3.0e-29 134.0 146 51.4
SpUn0247_0040 Schrenkiella parvula HOM05D003910 ORTHO05D004622 3.7e-27 127.1 76 73.7
TAR622G0657 Trochodendron aralioides HOM05D003910 ORTHO05D004622 2.5e-23 114.4 134 47.8
Actinidia03463 Actinidia chinensis HOM05D003910 ORTHO05D004622 2.1e-22 111.3 72 73.6
Lsat_1_v5_gn_8_139480 Lactuca sativa HOM05D003910 ORTHO05D004420 9.6e-20 102.4 106 52.8
TAR371G0308 Trochodendron aralioides HOM05D003910 ORTHO05D004622 5.3e-18 96.7 76 63.2
arahy.Tifrunner.gnm1.ann1.ZWJ939 Arachis hypogaea HOM05D000074 ORTHO05D004622 6.1e-14 83.2 157 38.2
SEGI_40510 Sequoiadendron giganteum HOM05D003910 ORTHO05D004622 3.9e-13 80.5 74 60.8
Aa31sc107G60 Aethionema arabicum HOM05D003910 ORTHO05D059684 6.9e-10 69.7 49 67.3
Lsat_1_v5_gn_8_143861 Lactuca sativa HOM05D003910 ORTHO05D004622 3.8e-08 63.9 45 71.1
Psat1g078960 Pisum sativum HOM05D003910 ORTHO05D004622 8.5e-08 62.8 83 45.8
Psat1g079000 Pisum sativum HOM05D003910 ORTHO05D004622 8.5e-08 62.8 83 45.8


User provided reference genes

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